Molecular Interactions Controlled Vocabulary
Ontology: MI
- IRI: http://purl.obolibrary.org/obo/mi.owl
- OBO Foundry: Library
- Download: http://purl.obolibrary.org/obo/mi.owl
- Home: https://github.com/HUPO-PSI/psi-mi-CV
- Documentation: None
- Contact: Luana Licata
- Description: A structured controlled vocabulary for the annotation of experiments concerned with protein-protein interactions.
Annotations
- comment: Each of the top level terms in this file is the root term of an independent controlled vocabulary
- comment: The correct use of these vocabularies in the PSI Molecular Interaction XML schema is
- comment: CVversion: 2.5.5
- comment: Notes:
- comment: The last accession number used in this file is stored in a separate file,
- comment: psi-mi.lastac. It MUST be updated when this file is updated.
- comment: formalized in a mapping file available at http://www.psidev.info/files/validator/xml/MI-CVMapping.xml.
- comment: The PSI MI schema defines short labels for controlled vocabulary terms
- comment: coverage: This file collect controlled vocabularies describing different aspects of molecular interactions.
- comment: mapping an element of the PSI Molecular Interaction XML schema.
- comment: The maintenance of this file is ensured by Luana Licata luana.licata@uniroma2.it and Sandra Orchard orchard@ebi.ac.uk
- comment: short labels are reported as PSI-MI-short synonyms that are created when a term is more than 20 characteres long.
- comment: publisher: This file is published by the PSI MI working group see http://psidev.info/MI
- date: 15:04:2021 22:57
- auto-generated-by: OBO-Edit 2.3.1
- default-namespace: PSI-MI
- has_obo_format_version: 1.2
- saved-by: pporras
Number of Terms (including imported terms) (Detailed Statistics)
- Class (1640)
- AnnotationProperty (45)
Top level terms and selected core terms
- alias type
- allosteric mechanism
- allosteric response
- allostery type
- attribute name
- biological role
- cooperative effect outcome
- cooperative mechanism
- cross-reference type
- curation content
- curation coverage
- curation depth
- database citation
- experimental preparation
- experimental role
- feature detection method
- feature range status
- feature type
- interaction confidence
- interaction detection method
- interaction type
- interactor type
- parameter type
- parameter unit
- participant identification method
- pre-assembly response
Number of SPARQL queries:8