Term IRI Term label Parent term IRI Parent term label Alternative term Definition http://purl.obolibrary.org/obo/PATO_0000001 quality http://purl.obolibrary.org/obo/BFO_0000020 specifically dependent continuant A dependent entity that inheres in a bearer by virtue of how the bearer is related to other entities http://purl.obolibrary.org/obo/BFO_0000004 independent continuant http://purl.obolibrary.org/obo/BFO_0000002 continuant A continuant that is a bearer of quality and realizable entity entities, in which other entities inhere and which itself cannot inhere in anything. http://purl.obolibrary.org/obo/BFO_0000015 process http://purl.obolibrary.org/obo/BFO_0000003 occurrent An occurrent that has temporal proper parts and for some time t, p s-depends_on some material entity at t. http://purl.obolibrary.org/obo/BFO_0000017 realizable entity http://purl.obolibrary.org/obo/BFO_0000020 specifically dependent continuant A specifically dependent continuant that inheres in continuant entities and are not exhibited in full at every time in which it inheres in an entity or group of entities. The exhibition or actualization of a realizable entity is a particular manifestation, functioning or process that occurs under certain circumstances. http://purl.obolibrary.org/obo/BFO_0000020 specifically dependent continuant http://purl.obolibrary.org/obo/BFO_0000002 continuant A continuant that inheres in or is borne by other entities. Every instance of A requires some specific instance of B which must always be the same. http://purl.obolibrary.org/obo/BFO_0000023 role http://purl.obolibrary.org/obo/BFO_0000017 realizable entity A realizable entity the manifestation of which brings about some result or end that is not essential to a continuant in virtue of the kind of thing that it is but that can be served or participated in by that kind of continuant in some kinds of natural, social or institutional contexts. http://purl.obolibrary.org/obo/BFO_0000040 material entity http://purl.obolibrary.org/obo/BFO_0000004 independent continuant An independent continuant that is spatially extended whose identity is independent of that of other entities and can be maintained through time. http://purl.obolibrary.org/obo/IAO_0000078 curation status specification http://purl.obolibrary.org/obo/IAO_0000102 data about an ontology part The curation status of the term. The allowed values come from an enumerated list of predefined terms. See the specification of these instances for more detailed definitions of each enumerated value. http://purl.obolibrary.org/obo/IAO_0000102 data about an ontology part http://purl.obolibrary.org/obo/IAO_0000027 data item Data about an ontology part is a data item about a part of an ontology, for example a term http://purl.obolibrary.org/obo/IAO_0000225 obsolescence reason specification http://purl.obolibrary.org/obo/IAO_0000102 data about an ontology part The reason for which a term has been deprecated. The allowed values come from an enumerated list of predefined terms. See the specification of these instances for more detailed definitions of each enumerated value. http://purl.obolibrary.org/obo/IAO_0000409 denotator type http://purl.obolibrary.org/obo/IAO_0000102 data about an ontology part A denotator type indicates how a term should be interpreted from an ontological perspective. http://purl.obolibrary.org/obo/BSPO_0000000 left side http://purl.obolibrary.org/obo/BSPO_0000054 anatomical side The side of an organism that is left of the sagittal plane. http://purl.obolibrary.org/obo/BSPO_0000005 anatomical surface http://purl.obolibrary.org/obo/CARO_0000010 anatomical boundary A 2D surface of an anatomical continuant. http://purl.obolibrary.org/obo/BSPO_0000006 anatomical margin http://purl.obolibrary.org/obo/BSPO_0000070 anatomical region Fiat anatomical region extending a short distance from the boundary of an object inwards. http://purl.obolibrary.org/obo/BSPO_0000007 right side http://purl.obolibrary.org/obo/BSPO_0000054 anatomical side The side of an organism that is right of the sagittal plane. http://purl.obolibrary.org/obo/BSPO_0000008 parasagittal plane http://purl.obolibrary.org/obo/BSPO_0000417 sagittal plane Sagittal plane that divides a bilateral body into unequal left and right parts. http://purl.obolibrary.org/obo/BSPO_0000009 midsagittal plane http://purl.obolibrary.org/obo/BSPO_0000417 sagittal plane Sagittal plane that divides bilateral body into equal left and right parts. http://purl.obolibrary.org/obo/BSPO_0000010 anatomical axis http://purl.obolibrary.org/obo/CARO_0000008 anatomical line A straight line through space, intersecting an anatomical entity. http://purl.obolibrary.org/obo/BSPO_0000011 upper-lower axis http://purl.obolibrary.org/obo/BSPO_0000010 anatomical axis An anatomical axis determined by gravity. http://purl.obolibrary.org/obo/BSPO_0000012 deep-superficial axis http://purl.obolibrary.org/obo/BSPO_0000010 anatomical axis An axis that extends from an internal position to a more external position in the body or body part. http://purl.obolibrary.org/obo/BSPO_0000013 anterior-posterior axis http://purl.obolibrary.org/obo/BSPO_0000010 anatomical axis An axis that extends through an organism from head end to opposite end of body or tail. http://purl.obolibrary.org/obo/BSPO_0000014 apical-basal axis relative to substrate http://purl.obolibrary.org/obo/BSPO_0000010 anatomical axis An axis that extends through an organism or organism part from the part of the organism or organism part attached to a substrate (basal) to the furthest from the attachment (apical). Note that the apical-basal axis is often used for organismal parts where there is attachment via a basal lamina or other structure. http://purl.obolibrary.org/obo/BSPO_0000015 proximal-distal axis http://purl.obolibrary.org/obo/BSPO_0000010 anatomical axis An axis that extends from the point of attachment of a structure (proximal) to the point furthest away from the plane of attachment (distal). http://purl.obolibrary.org/obo/BSPO_0000016 dorsal-ventral axis http://purl.obolibrary.org/obo/BSPO_0000010 anatomical axis An axis that is approximately perpendicular to the anterior-posterior axis and that extends through the horizontal plane of the body. http://purl.obolibrary.org/obo/BSPO_0000017 left-right axis http://purl.obolibrary.org/obo/BSPO_0000010 anatomical axis An axis that bisects an organism from left to right sides of body, through a sagittal plane. http://purl.obolibrary.org/obo/BSPO_0000018 transverse plane http://purl.obolibrary.org/obo/BSPO_0000400 anatomical plane Anatomical plane that divides body into anterior and posterior parts. http://purl.obolibrary.org/obo/BSPO_0000019 horizontal plane http://purl.obolibrary.org/obo/BSPO_0000400 anatomical plane Anatomical plane that divides bilateral body into dorsal and ventral parts. http://purl.obolibrary.org/obo/BSPO_0000020 upper-lower gradient http://purl.obolibrary.org/obo/BSPO_0000051 anatomical gradient Anatomical gradient that is distributed along the upper-lower axis. http://purl.obolibrary.org/obo/BSPO_0000021 deep-superficial gradient http://purl.obolibrary.org/obo/BSPO_0000051 anatomical gradient Anatomical gradient that is distributed along the deep-superficial axis. http://purl.obolibrary.org/obo/BSPO_0000022 superior side http://purl.obolibrary.org/obo/BSPO_0000054 anatomical side The side that is higher relative to the substrate. http://purl.obolibrary.org/obo/BSPO_0000023 apical-basal gradient http://purl.obolibrary.org/obo/BSPO_0000051 anatomical gradient Anatomical gradient that is distributed along the apical-basal axis. http://purl.obolibrary.org/obo/BSPO_0000024 proximal-distal gradient http://purl.obolibrary.org/obo/BSPO_0000051 anatomical gradient Anatomical gradient that is distributed along the proximal-distal axis. http://purl.obolibrary.org/obo/BSPO_0000025 inferior side http://purl.obolibrary.org/obo/BSPO_0000054 anatomical side The side that is lower relative to the substrate. http://purl.obolibrary.org/obo/BSPO_0000026 antero-dorsal region http://purl.obolibrary.org/obo/BSPO_0000079 dorsal region Anatomical region that overlaps the anterior and dorsal regions of a body or body part. http://purl.obolibrary.org/obo/BSPO_0000027 antero-ventral region http://purl.obolibrary.org/obo/BSPO_0000084 ventral region Anatomical region that overlaps the anterior and ventral regions of a body or body part. http://purl.obolibrary.org/obo/BSPO_0000028 postero-lateral region http://purl.obolibrary.org/obo/BSPO_0000082 lateral region Anatomical region that overlaps the posterior and lateral regions of the body or body part. http://purl.obolibrary.org/obo/BSPO_0000029 antero-lateral region http://purl.obolibrary.org/obo/BSPO_0000082 lateral region Anatomical region that overlaps the anterior and lateral regions of a body or body part. http://purl.obolibrary.org/obo/BSPO_0000030 postero-dorsal region http://purl.obolibrary.org/obo/BSPO_0000079 dorsal region Anatomical region that overlaps the posterior and dorsal regions of the body or body part. http://purl.obolibrary.org/obo/BSPO_0000033 deep region http://purl.obolibrary.org/obo/BSPO_0000070 anatomical region Anatomical region located deep within an organism or structure. http://purl.obolibrary.org/obo/BSPO_0000034 superficial region http://purl.obolibrary.org/obo/BSPO_0000070 anatomical region Anatomical region superficially located on the body or body part. http://purl.obolibrary.org/obo/BSPO_0000035 postero-ventral region http://purl.obolibrary.org/obo/BSPO_0000084 ventral region Anatomical region that overlaps the posterior and ventral regions of a body or body part. http://purl.obolibrary.org/obo/BSPO_0000042 antero-medial margin http://purl.obolibrary.org/obo/BSPO_0000683 medial margin Anatomical margin that is located on the antero-medial region of the body or body part. http://purl.obolibrary.org/obo/BSPO_0000045 antero-lateral margin http://purl.obolibrary.org/obo/BSPO_0000682 lateral margin Anatomical margin that is located on the antero-lateral region of the body or body part. http://purl.obolibrary.org/obo/BSPO_0000046 postero-medial margin http://purl.obolibrary.org/obo/BSPO_0000683 medial margin Anatomical margin that is located on the postero-medial region of the body or body part. http://purl.obolibrary.org/obo/BSPO_0000047 postero-lateral margin http://purl.obolibrary.org/obo/BSPO_0000682 lateral margin Anatomical margin that is located on the postero-lateral region of the body or body part. http://purl.obolibrary.org/obo/BSPO_0000048 dorso-medial margin http://purl.obolibrary.org/obo/BSPO_0000683 medial margin Anatomical margin that is located on the dorso-medial region of the body or body part. http://purl.obolibrary.org/obo/BSPO_0000049 ventro-medial margin http://purl.obolibrary.org/obo/BSPO_0000684 ventral margin Anatomical margin that is located on the ventro-medial region of the body or body part. http://purl.obolibrary.org/obo/BSPO_0000050 antero-medial region http://purl.obolibrary.org/obo/BSPO_0000083 medial region Anatomical region that overlaps the anterior and medial regions of the body or body part. http://purl.obolibrary.org/obo/BSPO_0000051 anatomical gradient http://purl.obolibrary.org/obo/CARO_0000006 material anatomical entity Material anatomical entity defined by change in the value of some quantity per unit of distance across some spatial axis. http://purl.obolibrary.org/obo/BSPO_0000052 anterior-posterior gradient http://purl.obolibrary.org/obo/BSPO_0000051 anatomical gradient Anatomical gradient that is distributed along the anterior-posterior axis. http://purl.obolibrary.org/obo/BSPO_0000053 dorsal-ventral gradient http://purl.obolibrary.org/obo/BSPO_0000051 anatomical gradient Anatomical gradient that is distributed along the dorsal-ventral axis. http://purl.obolibrary.org/obo/BSPO_0000054 anatomical side http://purl.obolibrary.org/obo/BSPO_0000070 anatomical region An anatomical region bounded by a plane perpendicular to an axis through the middle. http://purl.obolibrary.org/obo/BSPO_0000055 anterior side http://purl.obolibrary.org/obo/BSPO_0000054 anatomical side An anatomical region that is the entire part of an anatomical structure anterior to a transverse plane and bounded on one side by the same transverse plane. http://purl.obolibrary.org/obo/BSPO_0000056 posterior side http://purl.obolibrary.org/obo/BSPO_0000054 anatomical side An anatomical region that is the entire part of an anatomical structure posterior to a transverse plane and bounded on one side by the same transverse plane. http://purl.obolibrary.org/obo/BSPO_0000057 apical side http://purl.obolibrary.org/obo/BSPO_0000054 anatomical side Anatomical side that is located on the apical end of an organism or structure. http://purl.obolibrary.org/obo/BSPO_0000058 basal side http://purl.obolibrary.org/obo/BSPO_0000054 anatomical side Anatomical side that is located on the basal end of an organism or structure. http://purl.obolibrary.org/obo/BSPO_0000059 central side http://purl.obolibrary.org/obo/BSPO_0000054 anatomical side Anatomical side that is centrally located on an organism or structure. http://purl.obolibrary.org/obo/BSPO_0000060 contralateral side http://purl.obolibrary.org/obo/BSPO_0000054 anatomical side On the opposite side. http://purl.obolibrary.org/obo/BSPO_0000062 distal side http://purl.obolibrary.org/obo/BSPO_0000054 anatomical side Anatomical side that is distally located on an organism or structure. http://purl.obolibrary.org/obo/BSPO_0000063 dorsal side http://purl.obolibrary.org/obo/BSPO_0000054 anatomical side An anatomical region that is the entire part of an anatomical structure dorsal to a horizontal plane and bounded on one side by the same transverse plane. http://purl.obolibrary.org/obo/BSPO_0000064 postero-medial region http://purl.obolibrary.org/obo/BSPO_0000083 medial region Anatomical region that overlaps the posterior and medial regions of the body or body part. http://purl.obolibrary.org/obo/BSPO_0000065 ipsilateral side http://purl.obolibrary.org/obo/BSPO_0000054 anatomical side On the same side http://purl.obolibrary.org/obo/BSPO_0000068 ventral side http://purl.obolibrary.org/obo/BSPO_0000054 anatomical side An anatomical region that is the entire part of an anatomical structure ventral to a horizontal plane and bounded on one side by the same horizontal plane. http://purl.obolibrary.org/obo/BSPO_0000069 dorso-medial region http://purl.obolibrary.org/obo/BSPO_0000083 medial region Anatomical region that overlaps the dorsal and medial regions of the body or body part. http://purl.obolibrary.org/obo/BSPO_0000070 anatomical region http://purl.obolibrary.org/obo/CARO_0000003 connected anatomical structure A 3D region in space without well-defined compartmental boundaries; for example, the dorsal region of an ectoderm. http://purl.obolibrary.org/obo/BSPO_0000071 anterior region http://purl.obolibrary.org/obo/BSPO_0000070 anatomical region Anatomical region anteriorly located on the body or body part. http://purl.obolibrary.org/obo/BSPO_0000072 posterior region http://purl.obolibrary.org/obo/BSPO_0000070 anatomical region Anatomical region posteriorly located on the body or body part. http://purl.obolibrary.org/obo/BSPO_0000073 apical region http://purl.obolibrary.org/obo/BSPO_0000070 anatomical region Anatomical region located on the apical end on the body or body part. http://purl.obolibrary.org/obo/BSPO_0000074 basal region http://purl.obolibrary.org/obo/BSPO_0000070 anatomical region Anatomical region located basally on the body or body part. http://purl.obolibrary.org/obo/BSPO_0000075 central region http://purl.obolibrary.org/obo/BSPO_0000070 anatomical region Anatomical region centrally located on the body or body part. http://purl.obolibrary.org/obo/BSPO_0000077 proximal region http://purl.obolibrary.org/obo/BSPO_0000070 anatomical region Anatomical region proximally located on the body or body part. http://purl.obolibrary.org/obo/BSPO_0000078 distal region http://purl.obolibrary.org/obo/BSPO_0000070 anatomical region Anatomical region distally located on the body or body part. http://purl.obolibrary.org/obo/BSPO_0000079 dorsal region http://purl.obolibrary.org/obo/BSPO_0000070 anatomical region Anatomical region dorsally located on the body or body part. http://purl.obolibrary.org/obo/BSPO_0000080 dorso-lateral region http://purl.obolibrary.org/obo/BSPO_0000082 lateral region Anatomical region that overlaps the dorsal and lateral regions of a body or body part. http://purl.obolibrary.org/obo/BSPO_0000082 lateral region http://purl.obolibrary.org/obo/BSPO_0000070 anatomical region Anatomical region laterally located on the body or body part. http://purl.obolibrary.org/obo/BSPO_0000083 medial region http://purl.obolibrary.org/obo/BSPO_0000070 anatomical region Anatomical region medially located on the body or body part. http://purl.obolibrary.org/obo/BSPO_0000084 ventral region http://purl.obolibrary.org/obo/BSPO_0000070 anatomical region Anatomical region ventrally located on the body or body part. http://purl.obolibrary.org/obo/BSPO_0000085 ventro-lateral region http://purl.obolibrary.org/obo/BSPO_0000084 ventral region Anatomical region that overlaps the ventral and lateral regions of a body or body part. http://purl.obolibrary.org/obo/BSPO_0000112 ventro-medial region http://purl.obolibrary.org/obo/BSPO_0000084 ventral region The region corresponding to the ventral region of the entity, towards the midline. http://purl.obolibrary.org/obo/BSPO_0000127 peripheral region http://purl.obolibrary.org/obo/BSPO_0000070 anatomical region Anatomical region peripherally located on the body or body part. http://purl.obolibrary.org/obo/BSPO_0000195 adaxial-abaxial axis http://purl.obolibrary.org/obo/BSPO_0000010 anatomical axis An anatomical axis that extends from the side of the anatomical entity that is closer to an axis (adaxial) to the side that is further from the same axis (abaxial). http://purl.obolibrary.org/obo/BSPO_0000196 medial-external axis http://purl.obolibrary.org/obo/BSPO_0000010 anatomical axis An anatomical axis that extends from the center of the body outwards or externally. http://purl.obolibrary.org/obo/BSPO_0000197 medial-radial axis http://purl.obolibrary.org/obo/BSPO_0000196 medial-external axis An anatomical axis that is perpendicular to an apical/basal axis or proximal/distal axis and extends from the center of an axis (shoot axis or root in the case of plants) to any point on the exterior of the axis. http://purl.obolibrary.org/obo/BSPO_0000198 oral-aboral axis http://purl.obolibrary.org/obo/BSPO_0000010 anatomical axis An axis that extends from the oral opening to the furthest point in an organism that is directly opposite. http://purl.obolibrary.org/obo/BSPO_0000199 animal-vegetal axis http://purl.obolibrary.org/obo/BSPO_0000010 anatomical axis An axis that extends from the animal end of an egg or early embryo to the opposite, vegetal end. In animals with yolk-bearing eggs, the vegetal end is the yolk bearing pole. (pertains to animals only - both vertebrate and invertebrate embryos). http://purl.obolibrary.org/obo/BSPO_0000200 apical-basal axis relative to direction of growth http://purl.obolibrary.org/obo/BSPO_0000010 anatomical axis An axis of a plant structure that is determined by the direction of apical growth, either by an apical meristem or an apical cell. Apical is toward the direction of apical growth: toward the tip of a growing shoot axis, root, thallus, or non-vascular leaf. Basal is away from the direction of apical growth: toward the root-shoot junction in the case of the primary root or stem, toward the primary root or stem for higher order roots or branches, toward the point of attachment for non-vascular leaves, and toward the original point of growth (as determined in the embryo) for thalli. http://purl.obolibrary.org/obo/BSPO_0000201 tangential plane http://purl.obolibrary.org/obo/BSPO_0000400 anatomical plane Anatomical plane that is perpendicular to a radial plane. http://purl.obolibrary.org/obo/BSPO_0000202 radial plane http://purl.obolibrary.org/obo/BSPO_0000400 anatomical plane Anatomical plane that follows the two dimensions specified by an apical-basal axis relative to direction of growth and a medial-lateral axis. http://purl.obolibrary.org/obo/BSPO_0000371 anterior surface http://purl.obolibrary.org/obo/BSPO_0000005 anatomical surface Anatomical surface that is located on the anterior side of the body or body part. http://purl.obolibrary.org/obo/BSPO_0000372 posterior surface http://purl.obolibrary.org/obo/BSPO_0000005 anatomical surface Anatomical surface that is located on the posterior side of the body or body part. http://purl.obolibrary.org/obo/BSPO_0000373 apical surface http://purl.obolibrary.org/obo/BSPO_0000005 anatomical surface Anatomical surface that is located on the apical side of the body or body part. http://purl.obolibrary.org/obo/BSPO_0000374 basal surface http://purl.obolibrary.org/obo/BSPO_0000005 anatomical surface Anatomical surface that is located on the basal side of the body or body part. http://purl.obolibrary.org/obo/BSPO_0000377 proximal surface http://purl.obolibrary.org/obo/BSPO_0000005 anatomical surface Anatomical surface that is located on the proximal side of the body or body part. http://purl.obolibrary.org/obo/BSPO_0000378 distal surface http://purl.obolibrary.org/obo/BSPO_0000005 anatomical surface Anatomical surface that is located on the distal side of the body or body part. http://purl.obolibrary.org/obo/BSPO_0000379 dorsal surface http://purl.obolibrary.org/obo/BSPO_0000005 anatomical surface Anatomical surface that located on the dorsal side of the body or body part. http://purl.obolibrary.org/obo/BSPO_0000381 ipsilateral surface http://purl.obolibrary.org/obo/BSPO_0000005 anatomical surface Anatomical surface that is located on the same side of an organism or structure. http://purl.obolibrary.org/obo/BSPO_0000382 lateral surface http://purl.obolibrary.org/obo/BSPO_0000005 anatomical surface Anatomical surface that located on the lateral side of the body or body part. http://purl.obolibrary.org/obo/BSPO_0000383 medial surface http://purl.obolibrary.org/obo/BSPO_0000005 anatomical surface Anatomical surface that located on the medial side of the body or body part. http://purl.obolibrary.org/obo/BSPO_0000384 ventral surface http://purl.obolibrary.org/obo/BSPO_0000005 anatomical surface Anatomical surface that is located on the ventral side of the body or body part. http://purl.obolibrary.org/obo/BSPO_0000400 anatomical plane http://purl.obolibrary.org/obo/CARO_0000010 anatomical boundary A flat 2D plane intersecting an anatomical continuant, dividing it into two adjacent portions. http://purl.obolibrary.org/obo/BSPO_0000417 sagittal plane http://purl.obolibrary.org/obo/BSPO_0000400 anatomical plane Anatomical plane that divides a bilateral body into left and right parts, not necessarily of even size. http://purl.obolibrary.org/obo/BSPO_0000671 anterior margin http://purl.obolibrary.org/obo/BSPO_0000071 anterior region Anatomical margin that is located on the anterior side of a body or body part. http://purl.obolibrary.org/obo/BSPO_0000672 posterior margin http://purl.obolibrary.org/obo/BSPO_0000072 posterior region Anatomical margin that is located on the posterior side of the body or body part. http://purl.obolibrary.org/obo/BSPO_0000673 apical margin http://purl.obolibrary.org/obo/BSPO_0000073 apical region Anatomical margin that is located on the apical side of the body or body part. http://purl.obolibrary.org/obo/BSPO_0000674 basal margin http://purl.obolibrary.org/obo/BSPO_0000074 basal region Anatomical margin that is located on the basal side of the body or body part. http://purl.obolibrary.org/obo/BSPO_0000677 proximal margin http://purl.obolibrary.org/obo/BSPO_0000077 proximal region Anatomical margin that is located on the proximal region of the body or body part. http://purl.obolibrary.org/obo/BSPO_0000678 distal margin http://purl.obolibrary.org/obo/BSPO_0000078 distal region Anatomical margin that is located on the distal side of the body or body part. http://purl.obolibrary.org/obo/BSPO_0000679 dorsal margin http://purl.obolibrary.org/obo/BSPO_0000079 dorsal region Anatomical margin that is located on the dorsal side of body or body part. http://purl.obolibrary.org/obo/BSPO_0000680 dorso-lateral margin http://purl.obolibrary.org/obo/BSPO_0000682 lateral margin Anatomical margin that is located on the dorso-lateral region of the body or body part. http://purl.obolibrary.org/obo/BSPO_0000682 lateral margin http://purl.obolibrary.org/obo/BSPO_0000082 lateral region Anatomical margin that is located on the lateral side of the body or body part. http://purl.obolibrary.org/obo/BSPO_0000683 medial margin http://purl.obolibrary.org/obo/BSPO_0000083 medial region Anatomical margin that is located on the medial side of the body or body part. http://purl.obolibrary.org/obo/BSPO_0000684 ventral margin http://purl.obolibrary.org/obo/BSPO_0000084 ventral region Anatomical margin that is located on the ventral side of the body or body part. http://purl.obolibrary.org/obo/BSPO_0000685 ventro-lateral margin http://purl.obolibrary.org/obo/BSPO_0000684 ventral margin Anatomical margin that is located on the ventro-lateral region of the body or body part. http://purl.obolibrary.org/obo/BSPO_0000686 antero-dorsal margin http://purl.obolibrary.org/obo/BSPO_0000679 dorsal margin Anatomical margin that is located on the antero-dorso region of the body or body part. http://purl.obolibrary.org/obo/BSPO_0000687 postero-dorsal margin http://purl.obolibrary.org/obo/BSPO_0000679 dorsal margin Anatomical margin that is located on the postero-dorsal region of the body or body part. http://purl.obolibrary.org/obo/BSPO_0000688 antero-ventral margin http://purl.obolibrary.org/obo/BSPO_0000684 ventral margin Anatomical margin that is located on the antero-ventral region of the body or body part. http://purl.obolibrary.org/obo/BSPO_0000689 postero-ventral margin http://purl.obolibrary.org/obo/BSPO_0000684 ventral margin Anatomical margin that is located on the postero-ventral region of the body or body part. http://purl.obolibrary.org/obo/BSPO_0001001 medial-lateral axis http://purl.obolibrary.org/obo/BSPO_0000196 medial-external axis An axis that extends from the center of organism to one or other side. http://purl.obolibrary.org/obo/GO_0016301 kinase activity http://purl.obolibrary.org/obo/GO_0003674 molecular_function Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule. http://purl.obolibrary.org/obo/CARO_0000000 anatomical entity http://purl.obolibrary.org/obo/BFO_0000004 independent continuant A part of a cellular organism that is either an immaterial entity or a material entity with granularity above the level of a protein complex. Or, a substance produced by a cellular organism with granularity above the level of a protein complex. http://purl.obolibrary.org/obo/CARO_0000003 connected anatomical structure http://purl.obolibrary.org/obo/CARO_0000006 material anatomical entity Material anatomical entity that is a single connected structure with inherent 3D shape generated by coordinated expression of the organism's own genome. http://purl.obolibrary.org/obo/CARO_0000006 material anatomical entity http://purl.obolibrary.org/obo/CARO_0000000 anatomical entity An anatomical entity that has mass. http://purl.obolibrary.org/obo/CARO_0000007 immaterial anatomical entity http://purl.obolibrary.org/obo/CARO_0000000 anatomical entity An anatomical entity that has no mass. http://purl.obolibrary.org/obo/CARO_0000008 anatomical line http://purl.obolibrary.org/obo/CARO_0000007 immaterial anatomical entity A one dimensional, immaterial anatomical entity. http://purl.obolibrary.org/obo/CARO_0000010 anatomical boundary http://purl.obolibrary.org/obo/CARO_0000007 immaterial anatomical entity A non-material anatomical entity of two dimensions. Anatomical boundaries are contiguous structures. http://purl.obolibrary.org/obo/BFO_0000141 immaterial entity http://purl.obolibrary.org/obo/BFO_0000004 independent continuant http://purl.obolibrary.org/obo/BFO_0000034 function http://purl.obolibrary.org/obo/BFO_0000016 disposition http://purl.obolibrary.org/obo/BFO_0000016 disposition http://purl.obolibrary.org/obo/BFO_0000017 realizable entity http://purl.obolibrary.org/obo/BFO_0000019 quality http://purl.obolibrary.org/obo/BFO_0000020 specifically dependent continuant http://purl.obolibrary.org/obo/IAO_0000027 data item http://purl.obolibrary.org/obo/IAO_0000030 information content entity http://purl.obolibrary.org/obo/BSPO_0000376 contralateral surface http://purl.obolibrary.org/obo/BSPO_0000005 anatomical surface http://purl.obolibrary.org/obo/BSPO_0000001 upper side http://purl.obolibrary.org/obo/BSPO_0000054 anatomical side http://purl.obolibrary.org/obo/BSPO_0000002 lower side http://purl.obolibrary.org/obo/BSPO_0000054 anatomical side http://purl.obolibrary.org/obo/BSPO_0000003 deep side http://purl.obolibrary.org/obo/BSPO_0000054 anatomical side http://purl.obolibrary.org/obo/BSPO_0000004 superficial side http://purl.obolibrary.org/obo/BSPO_0000054 anatomical side http://purl.obolibrary.org/obo/BSPO_0000061 proximal side http://purl.obolibrary.org/obo/BSPO_0000054 anatomical side http://purl.obolibrary.org/obo/BSPO_0000066 lateral side http://purl.obolibrary.org/obo/BSPO_0000054 anatomical side http://purl.obolibrary.org/obo/BSPO_0000067 medial side http://purl.obolibrary.org/obo/BSPO_0000054 anatomical side http://purl.obolibrary.org/obo/BSPO_0000129 peripheral side http://purl.obolibrary.org/obo/BSPO_0000054 anatomical side http://purl.obolibrary.org/obo/BSPO_0000130 axial side http://purl.obolibrary.org/obo/BSPO_0000054 anatomical side http://purl.obolibrary.org/obo/BSPO_0000031 upper region http://purl.obolibrary.org/obo/BSPO_0000070 anatomical region http://purl.obolibrary.org/obo/BSPO_0000032 lower region http://purl.obolibrary.org/obo/BSPO_0000070 anatomical region http://purl.obolibrary.org/obo/BSPO_0000076 contralateral region http://purl.obolibrary.org/obo/BSPO_0000070 anatomical region http://purl.obolibrary.org/obo/BSPO_0000081 ipsilateral region http://purl.obolibrary.org/obo/BSPO_0000070 anatomical region http://purl.obolibrary.org/obo/BSPO_0000128 axial region http://purl.obolibrary.org/obo/BSPO_0000070 anatomical region http://purl.obolibrary.org/obo/BSPO_0000036 anterior-most region http://purl.obolibrary.org/obo/BSPO_0000071 anterior region http://purl.obolibrary.org/obo/BSPO_0000037 posterior-most region http://purl.obolibrary.org/obo/BSPO_0000072 posterior region http://purl.obolibrary.org/obo/BSPO_0000038 dorsal-most region http://purl.obolibrary.org/obo/BSPO_0000079 dorsal region http://purl.obolibrary.org/obo/BSPO_0000039 ventral-most region http://purl.obolibrary.org/obo/BSPO_0000084 ventral region http://purl.obolibrary.org/obo/BSPO_0000087 anterior compartment http://purl.obolibrary.org/obo/BSPO_0000086 anatomical compartment http://purl.obolibrary.org/obo/BSPO_0000088 compartment boundary http://purl.obolibrary.org/obo/BSPO_0000086 anatomical compartment http://purl.obolibrary.org/obo/BSPO_0000089 dorsal compartment http://purl.obolibrary.org/obo/BSPO_0000086 anatomical compartment http://purl.obolibrary.org/obo/BSPO_0000090 posterior compartment http://purl.obolibrary.org/obo/BSPO_0000086 anatomical compartment http://purl.obolibrary.org/obo/BSPO_0000091 ventral compartment http://purl.obolibrary.org/obo/BSPO_0000086 anatomical compartment http://purl.obolibrary.org/obo/BSPO_0000041 deep/superficial compartment boundary http://purl.obolibrary.org/obo/BSPO_0000092 anatomical compartment boundary http://purl.obolibrary.org/obo/BSPO_0000040 upper/lower compartment boundary http://purl.obolibrary.org/obo/BSPO_0000092 anatomical compartment boundary http://purl.obolibrary.org/obo/BSPO_0000043 apical/basal compartment boundary http://purl.obolibrary.org/obo/BSPO_0000092 anatomical compartment boundary http://purl.obolibrary.org/obo/BSPO_0000044 proximal/distal compartment boundary http://purl.obolibrary.org/obo/BSPO_0000092 anatomical compartment boundary http://purl.obolibrary.org/obo/BSPO_0000093 anterior/posterior compartment boundary http://purl.obolibrary.org/obo/BSPO_0000092 anatomical compartment boundary http://purl.obolibrary.org/obo/BSPO_0000094 dorsal/ventral compartment boundary http://purl.obolibrary.org/obo/BSPO_0000092 anatomical compartment boundary http://purl.obolibrary.org/obo/BSPO_0000086 anatomical compartment http://purl.obolibrary.org/obo/CARO_0000003 connected anatomical structure http://purl.obolibrary.org/obo/BSPO_0000092 anatomical compartment boundary http://purl.obolibrary.org/obo/CARO_0000010 anatomical boundary http://purl.obolibrary.org/obo/BFO_0000002 continuant An entity that exists in full at any time in which it exists at all, persists through time while maintaining its identity and has no temporal parts. http://purl.obolibrary.org/obo/BFO_0000003 occurrent An entity that has temporal parts and that happens, unfolds or develops through time. http://purl.obolibrary.org/obo/GO_0003674 molecular_function A molecular process that can be carried out by the action of a single macromolecular machine, usually via direct physical interactions with other molecular entities. Function in this sense denotes an action, or activity, that a gene product (or a complex) performs. These actions are described from two distinct but related perspectives: (1) biochemical activity, and (2) role as a component in a larger system/process. http://purl.obolibrary.org/obo/GO_0008150 biological_process A biological process represents a specific objective that the organism is genetically programmed to achieve. Biological processes are often described by their outcome or ending state, e.g., the biological process of cell division results in the creation of two daughter cells (a divided cell) from a single parent cell. A biological process is accomplished by a particular set of molecular functions carried out by specific gene products (or macromolecular complexes), often in a highly regulated manner and in a particular temporal sequence. http://purl.obolibrary.org/obo/IAO_0000030 information content entity http://purl.obolibrary.org/obo/BSPO_00000021 deep-superficial gradient (obsolete) http://purl.obolibrary.org/obo/RO_0000052 characteristic of http://purl.obolibrary.org/obo/RO_0002314 characteristic of part of inheres_in a relation between a specifically dependent continuant (the characteristic) and any other entity (the bearer), in which the characteristic depends on the bearer for its existence. http://purl.obolibrary.org/obo/RO_0000079 function of http://purl.obolibrary.org/obo/RO_0000052 characteristic of is function of a relation between a function and an independent continuant (the bearer), in which the function specifically depends on the bearer for its existence http://purl.obolibrary.org/obo/RO_0000080 quality of http://purl.obolibrary.org/obo/RO_0000052 characteristic of quality_of a relation between a quality and an independent continuant (the bearer), in which the quality specifically depends on the bearer for its existence http://purl.obolibrary.org/obo/RO_0000085 has function http://purl.obolibrary.org/obo/RO_0000053 has characteristic has_function a relation between an independent continuant (the bearer) and a function, in which the function specifically depends on the bearer for its existence http://purl.obolibrary.org/obo/RO_0000086 has quality http://purl.obolibrary.org/obo/RO_0000053 has characteristic has_quality a relation between an independent continuant (the bearer) and a quality, in which the quality specifically depends on the bearer for its existence http://purl.obolibrary.org/obo/BFO_0000051 has part http://purl.obolibrary.org/obo/RO_0002131 overlaps has_part a core relation that holds between a whole and its part http://purl.obolibrary.org/obo/RO_0000087 has role http://purl.obolibrary.org/obo/RO_0000053 has characteristic has_role a relation between an independent continuant (the bearer) and a role, in which the role specifically depends on the bearer for its existence http://purl.obolibrary.org/obo/RO_0002327 enables http://purl.obolibrary.org/obo/RO_0002215 capable of is executing c enables p iff c is capable of p and c acts to execute p. http://purl.obolibrary.org/obo/RO_0002409 indirectly negatively regulates http://purl.obolibrary.org/obo/RO_0012012 indirectly regulates indirectly inhibits p indirectly negatively regulates q iff p is indirectly causally upstream of q and p negatively regulates q. http://purl.obolibrary.org/obo/RO_0002436 molecularly interacts with http://purl.obolibrary.org/obo/RO_0002434 interacts with molecularly binds with An interaction relationship in which the two partners are molecular entities that directly physically interact with each other for example via a stable binding interaction or a brief interaction during which one modifies the other. http://purl.obolibrary.org/obo/RO_0002449 directly negatively regulates activity of http://purl.obolibrary.org/obo/RO_0002448 directly regulates activity of directly inhibits The entity A, immediately upstream of the entity B, has an activity that negatively regulates an activity performed by B. For example, A and B may be gene products and binding of B by A negatively regulates the kinase activity of B. http://purl.obolibrary.org/obo/BFO_0000062 preceded by http://purl.obolibrary.org/obo/RO_0002086 ends after preceded_by x is preceded by y if and only if the time point at which y ends is before or equivalent to the time point at which x starts. Formally: x preceded by y iff ω(y) <= α(x), where α is a function that maps a process to a start point, and ω is a function that maps a process to an end point. http://purl.obolibrary.org/obo/RO_0000081 role of http://purl.obolibrary.org/obo/RO_0000052 characteristic of role_of a relation between a role and an independent continuant (the bearer), in which the role specifically depends on the bearer for its existence http://purl.obolibrary.org/obo/BFO_0000050 part of http://purl.obolibrary.org/obo/RO_0002131 overlaps part_of a core relation that holds between a part and its whole http://purl.obolibrary.org/obo/RO_0002233 has input http://purl.obolibrary.org/obo/RO_0000057 has participant consumes p has input c iff: p is a process, c is a material entity, c is a participant in p, c is present at the start of p, and the state of c is modified during p. http://purl.obolibrary.org/obo/RO_0002314 characteristic of part of http://purl.obolibrary.org/obo/RO_0002502 depends on inheres in part of q characteristic of part of w if and only if there exists some p such that q inheres in p and p part of w. http://purl.obolibrary.org/obo/RO_0002215 capable of http://purl.obolibrary.org/obo/RO_0002216 capable of part of has function realized in A relation between a material entity (such as a cell) and a process, in which the material entity has the ability to carry out the process. http://purl.obolibrary.org/obo/RO_0002331 involved in http://purl.obolibrary.org/obo/RO_0002431 involved in or involved in regulation of enables part of c involved_in p if and only if c enables some process p', and p' is part of p http://purl.obolibrary.org/obo/RO_0002431 involved in or involved in regulation of http://purl.obolibrary.org/obo/RO_0002500 causal agent in process involved in or reguates c involved in or regulates p if and only if either (i) c is involved in p or (ii) c is involved in regulation of p http://purl.obolibrary.org/obo/RO_0002216 capable of part of http://purl.obolibrary.org/obo/RO_0002500 causal agent in process has function in c stands in this relationship to p if and only if there exists some p' such that c is capable_of p', and p' is part_of p. http://purl.obolibrary.org/obo/RO_0002329 part of structure that is capable of http://purl.obolibrary.org/obo/RO_0002328 functionally related to 0 this relation holds between c and p when c is part of some c', and c' is capable of p. http://purl.obolibrary.org/obo/RO_0002418 causally upstream of or within http://purl.obolibrary.org/obo/RO_0002501 causal relation between processes influences (processual) p is 'causally upstream or within' q iff p is causally related to q, and the end of p precedes, or is coincident with, the end of q. http://purl.obolibrary.org/obo/RO_0002407 indirectly positively regulates http://purl.obolibrary.org/obo/RO_0012012 indirectly regulates indirectly activates p indirectly positively regulates q iff p is indirectly causally upstream of q and p positively regulates q. http://purl.obolibrary.org/obo/RO_0002450 directly positively regulates activity of http://purl.obolibrary.org/obo/RO_0002448 directly regulates activity of directly activates The entity A, immediately upstream of the entity B, has an activity that positively regulates an activity performed by B. For example, A and B may be gene products and binding of B by A positively regulates the kinase activity of B. http://purl.obolibrary.org/obo/RO_0002025 has effector activity http://purl.obolibrary.org/obo/RO_0002017 has component activity A 'has effector activity' B if A and B are GO molecular functions (GO_0003674), A 'has component activity' B and B is the effector (output function) of B. Each compound function has only one effector activity. http://purl.obolibrary.org/obo/BSPO_0020001 in central side of http://purl.obolibrary.org/obo/BFO_0000050 part of X in_central_side Y <=> if Y is subdivided into left and right portions around some median divisor, all parts of X are closer to the median divisor than the outermost lateral sides. http://purl.obolibrary.org/obo/BSPO_0015101 in dorsal side of http://purl.obolibrary.org/obo/BFO_0000050 part of X dorsal side of Y <=> if Y is subdivided into two dorsal and ventral portions, X is part of the dorsal portion. http://purl.obolibrary.org/obo/BSPO_0015102 in ventral side of http://purl.obolibrary.org/obo/BFO_0000050 part of X ventral side of Y <=> if Y is subdivided into two dorsal and ventral portions, X is part of the ventral portion. http://purl.obolibrary.org/obo/BFO_0000063 precedes http://purl.obolibrary.org/obo/RO_0002222 temporally related to x precedes y if and only if the time point at which x ends is before or equivalent to the time point at which y starts. Formally: x precedes y iff ω(x) <= α(y), where α is a function that maps a process to a start point, and ω is a function that maps a process to an end point. http://purl.obolibrary.org/obo/RO_0002220 adjacent to http://purl.obolibrary.org/obo/RO_0002163 spatially disjoint from x adjacent to y if and only if x and y share a boundary. http://purl.obolibrary.org/obo/RO_0002018 has component process http://purl.obolibrary.org/obo/RO_0002180 has component w 'has process component' p if p and w are processes, w 'has part' p and w is such that it can be directly disassembled into into n parts p, p2, p3, ..., pn, where these parts are of similar type. http://purl.obolibrary.org/obo/RO_0019000 regulates characteristic http://purl.obolibrary.org/obo/RO_0002410 causally related to A relationship that holds between a process and a characteristic in which process (P) regulates characteristic (C) iff: P results in the existence of C OR affects the intensity or magnitude of C. http://purl.obolibrary.org/obo/RO_0019001 positively regulates characteristic http://purl.obolibrary.org/obo/RO_0019000 regulates characteristic A relationship that holds between a process and a characteristic in which process (P) positively regulates characteristic (C) iff: P results in an increase in the intensity or magnitude of C. http://purl.obolibrary.org/obo/RO_0019002 negatively regulates characteristic http://purl.obolibrary.org/obo/RO_0019000 regulates characteristic A relationship that holds between a process and a characteristic in which process (P) negatively regulates characteristic (C) iff: P results in a decrease in the intensity or magnitude of C. http://purl.obolibrary.org/obo/RO_0002333 enabled by http://purl.obolibrary.org/obo/RO_0002328 functionally related to inverse of enables http://purl.obolibrary.org/obo/RO_0002404 causally downstream of http://purl.obolibrary.org/obo/RO_0002427 causally downstream of or within inverse of upstream of http://purl.obolibrary.org/obo/RO_0002412 immediately causally upstream of http://purl.obolibrary.org/obo/RO_0002411 causally upstream of p is immediately causally upstream of q iff p is causally upstream of q, and the end of p is coincident with the beginning of q. http://purl.obolibrary.org/obo/RO_0002448 directly regulates activity of http://purl.obolibrary.org/obo/RO_0011002 regulates activity of The entity A, immediately upstream of the entity B, has an activity that regulates an activity performed by B. For example, A and B may be gene products and binding of B by A regulates the kinase activity of B. A and B can be physically interacting but not necessarily. Immediately upstream means there are no intermediate entity between A and B. http://purl.obolibrary.org/obo/RO_0002566 causally influences http://purl.obolibrary.org/obo/RO_0002506 causal relation between entities The entity or characteristic A is causally upstream of the entity or characteristic B, A having an effect on B. An entity corresponds to any biological type of entity as long as a mass is measurable. A characteristic corresponds to a particular specificity of an entity (e.g., phenotype, shape, size). http://purl.obolibrary.org/obo/RO_0002263 acts upstream of http://purl.obolibrary.org/obo/RO_0002264 acts upstream of or within c acts upstream of p if and only if c enables some f that is involved in p' and p' occurs chronologically before p, is not part of p, and affects the execution of p. c is a material entity and f, p, p' are processes. http://purl.obolibrary.org/obo/RO_0002304 causally upstream of, positive effect http://purl.obolibrary.org/obo/RO_0004047 causally upstream of or within, positive effect p is causally upstream of, positive effect q iff p is casually upstream of q, and the execution of p is required for the execution of q. http://purl.obolibrary.org/obo/RO_0002305 causally upstream of, negative effect http://purl.obolibrary.org/obo/RO_0004046 causally upstream of or within, negative effect p is causally upstream of, negative effect q iff p is casually upstream of q, and the execution of p decreases the execution of q. http://purl.obolibrary.org/obo/BSPO_0030004 anteriormost part of http://purl.obolibrary.org/obo/BSPO_0000123 in anterior side of x anteriormost_part_of y iff x part_of y and there is no z which is part_of y and is more anterior than x but not part_of x; x is adjacent to the anterior boundary of y http://purl.obolibrary.org/obo/BSPO_0030005 lateralmost part of http://purl.obolibrary.org/obo/BSPO_0000126 in lateral side of x lateralmost_part_of y iff x part_of y and there is no z which is part_of y and is more lateral than x but not part_of x; x is adjacent to the lateral boundary of y http://purl.obolibrary.org/obo/BSPO_0030006 in medial side of http://purl.obolibrary.org/obo/BFO_0000050 part of X medial side of Y <=> if Y is subdivided into two medial and lateral portions, X is part of the medial portion. http://purl.obolibrary.org/obo/BSPO_0030007 medialmost part of http://purl.obolibrary.org/obo/BSPO_0030006 in medial side of x medialmost_part_of y iff x part_of y and there is no z which is part_of y and is more medial than x but not part_of x; x is adjacent to the medial boundary of y http://purl.obolibrary.org/obo/RO_0002131 overlaps http://purl.obolibrary.org/obo/RO_0002323 mereotopologically related to x overlaps y iff they have some part in common. http://purl.obolibrary.org/obo/RO_0000091 has disposition http://purl.obolibrary.org/obo/RO_0000053 has characteristic a relation between an independent continuant (the bearer) and a disposition, in which the disposition specifically depends on the bearer for its existence http://purl.obolibrary.org/obo/RO_0000092 disposition of http://purl.obolibrary.org/obo/RO_0000052 characteristic of inverse of has disposition http://purl.obolibrary.org/obo/BSPO_0000106 contralateral to http://purl.obolibrary.org/obo/BSPO_0000113 opposite to On the opposite side from. For example, the left arm is contralateral to the right arm (and the right leg). http://purl.obolibrary.org/obo/BSPO_0000120 in left side of http://purl.obolibrary.org/obo/BSPO_0000126 in lateral side of X in left side of Y <=> if Y is subdivided into two left and right portions, X is part of the left portion. http://purl.obolibrary.org/obo/BSPO_0000121 in right side of http://purl.obolibrary.org/obo/BSPO_0000126 in lateral side of X in right side of Y <=> if Y is subdivided into two left and right portions, X is part of the right portion. http://purl.obolibrary.org/obo/BSPO_0000122 in posterior side of http://purl.obolibrary.org/obo/BFO_0000050 part of X posterior side of Y <=> if Y is subdivided into two anterior and posterior portions, X is part of the posterior portion. http://purl.obolibrary.org/obo/BSPO_0000123 in anterior side of http://purl.obolibrary.org/obo/BFO_0000050 part of X anterior side of Y <=> if Y is subdivided into two anterior and posterior portions, X is part of the anterior portion. http://purl.obolibrary.org/obo/BSPO_0000124 in proximal side of http://purl.obolibrary.org/obo/BFO_0000050 part of x in proximal side of y <=> if y is subdivided into two proximal and distal portions, y is part of the proximal portion. http://purl.obolibrary.org/obo/BSPO_0000125 in distal side of http://purl.obolibrary.org/obo/BFO_0000050 part of x in distal side of y <=> if y is subdivided into two proximal and distal portions, y is part of the distal portion. http://purl.obolibrary.org/obo/BSPO_0000126 in lateral side of http://purl.obolibrary.org/obo/BFO_0000050 part of X in lateral side of Y <=> if X is in left side of Y or X is in right side of Y. X is often, but not always a paired structure http://purl.obolibrary.org/obo/BSPO_0001100 in superficial part of http://purl.obolibrary.org/obo/BFO_0000050 part of X superficial part of Y <=> if Y is subdivided into two superficial and deep portions, X is part of the superficial portion. http://purl.obolibrary.org/obo/BSPO_0001101 in deep part of http://purl.obolibrary.org/obo/BFO_0000050 part of X superficial part of Y <=> if Y is subdivided into two superficial and deep portions, X is part of the deep portion. http://purl.obolibrary.org/obo/BSPO_0001106 proximalmost part of http://purl.obolibrary.org/obo/BSPO_0000124 in proximal side of X proximalmost part of Y <=> X is in proximal side of Y and X is adjacent to the proximal boundary of Y http://purl.obolibrary.org/obo/BSPO_0001107 immediately deep to http://purl.obolibrary.org/obo/BSPO_0000107 deep to x immediately deep to y iff x deep_to y and x is contiguous with y. http://purl.obolibrary.org/obo/BSPO_0001108 distalmost part of http://purl.obolibrary.org/obo/BSPO_0000125 in distal side of X distalmost part of Y <=> X is in distal side of Y and X is adjacent to the distal boundary of Y http://purl.obolibrary.org/obo/BSPO_0005001 intersects midsagittal plane of http://purl.obolibrary.org/obo/BFO_0000050 part of X intersects median plane of iff X crosses the midine plane of Y. http://purl.obolibrary.org/obo/BSPO_0015009 immediately anterior to http://purl.obolibrary.org/obo/BSPO_0000096 anterior to x immediately anterior to y iff x anterior to y and x is contiguous with y. http://purl.obolibrary.org/obo/BSPO_0015010 immediately distal to http://purl.obolibrary.org/obo/BSPO_0000097 distal to x immediately distal to y iff x distal to y and x is contiguous with y. http://purl.obolibrary.org/obo/BSPO_0015011 immediately dorsal to http://purl.obolibrary.org/obo/BSPO_0000098 dorsal to x immediately dorsal to y iff x dorsal to y and x is contiguous with y. http://purl.obolibrary.org/obo/BSPO_0015012 immediately posterior to http://purl.obolibrary.org/obo/BSPO_0000099 posterior to x immediately posterior to y iff x posterior_to y and x is contiguous with y. http://purl.obolibrary.org/obo/BSPO_0015013 immediately proximal to http://purl.obolibrary.org/obo/BSPO_0000100 proximal to x immediately proximal to y iff x proximal to y and x is contiguous with y. http://purl.obolibrary.org/obo/BSPO_0015014 immediately superficial to http://purl.obolibrary.org/obo/BSPO_0000108 superficial to x immediately superficial to y iff x superficial to y and x is contiguous with y. http://purl.obolibrary.org/obo/BSPO_0015015 immediately ventral to http://purl.obolibrary.org/obo/BSPO_0000102 ventral to x immediately ventral to y iff x ventral to y and x is contiguous with y. http://purl.obolibrary.org/obo/BSPO_0015016 immediately left of http://purl.obolibrary.org/obo/BSPO_0000110 left of x immediately left of y iff x left_of y and x is contiguous with y. http://purl.obolibrary.org/obo/BSPO_0015017 immediately right of http://purl.obolibrary.org/obo/BSPO_0000111 right of x immediately right of y iff x right of y and x is contiguous with y. http://purl.obolibrary.org/obo/RO_0011002 regulates activity of http://purl.obolibrary.org/obo/RO_0002566 causally influences The entity A has an activity that regulates an activity of the entity B. For example, A and B are gene products where the catalytic activity of A regulates the kinase activity of B. http://purl.obolibrary.org/obo/RO_0002411 causally upstream of http://purl.obolibrary.org/obo/RO_0002418 causally upstream of or within p is causally upstream of q iff p is causally related to q, the end of p precedes the end of q, and p is not an occurrent part of q. http://purl.obolibrary.org/obo/RO_0002211 regulates http://purl.obolibrary.org/obo/RO_0002411 causally upstream of p regulates q iff p is causally upstream of q, the execution of p is not constant and varies according to specific conditions, and p influences the rate or magnitude of execution of q due to an effect either on some enabler of q or some enabler of a part of q. http://purl.obolibrary.org/obo/RO_0002212 negatively regulates http://purl.obolibrary.org/obo/RO_0002211 regulates p negatively regulates q iff p regulates q, and p decreases the rate or magnitude of execution of q. http://purl.obolibrary.org/obo/RO_0002213 positively regulates http://purl.obolibrary.org/obo/RO_0002211 regulates p positively regulates q iff p regulates q, and p increases the rate or magnitude of execution of q. http://purl.obolibrary.org/obo/RO_0002180 has component http://purl.obolibrary.org/obo/BFO_0000051 has part w 'has component' p if w 'has part' p and w is such that it can be directly disassembled into into n parts p, p2, p3, ..., pn, where these parts are of similar type. http://purl.obolibrary.org/obo/RO_0002163 spatially disjoint from http://purl.obolibrary.org/obo/RO_0002323 mereotopologically related to A is spatially_disjoint_from B if and only if they have no parts in common http://purl.obolibrary.org/obo/RO_0002352 input of http://purl.obolibrary.org/obo/RO_0002328 functionally related to inverse of has input http://purl.obolibrary.org/obo/RO_0002023 directly negatively regulated by http://purl.obolibrary.org/obo/RO_0002022 directly regulated by Process(P2) is directly negatively regulated by process(P1) iff: P1 negatively regulates P2 via direct physical interaction between an agent executing P1 (or some part of P1) and an agent executing P2 (or some part of P2). For example, if protein A has protein binding activity(P1) that targets protein B and this binding negatively regulates the kinase activity (P2) of protein B then P2 directly negatively regulated by P1. http://purl.obolibrary.org/obo/RO_0002024 directly positively regulated by http://purl.obolibrary.org/obo/RO_0002022 directly regulated by Process(P2) is directly postively regulated by process(P1) iff: P1 positively regulates P2 via direct physical interaction between an agent executing P1 (or some part of P1) and an agent executing P2 (or some part of P2). For example, if protein A has protein binding activity(P1) that targets protein B and this binding positively regulates the kinase activity (P2) of protein B then P2 is directly postively regulated by P1. http://purl.obolibrary.org/obo/RO_0012011 indirectly causally upstream of http://purl.obolibrary.org/obo/RO_0002411 causally upstream of p is indirectly causally upstream of q iff p is causally upstream of q and there exists some process r such that p is causally upstream of r and r is causally upstream of q. http://purl.obolibrary.org/obo/RO_0012012 indirectly regulates http://purl.obolibrary.org/obo/RO_0012011 indirectly causally upstream of p indirectly regulates q iff p is indirectly causally upstream of q and p regulates q. http://purl.obolibrary.org/obo/RO_0002264 acts upstream of or within http://purl.obolibrary.org/obo/RO_0002500 causal agent in process c acts upstream of or within p if c is enables f, and f is causally upstream of or within p. c is a material entity and p is an process. http://purl.obolibrary.org/obo/RO_0004031 enables subfunction http://purl.obolibrary.org/obo/RO_0002328 functionally related to Holds between an entity and an process P where the entity enables some larger compound process, and that larger process has-part P. http://purl.obolibrary.org/obo/RO_0004034 acts upstream of, positive effect http://purl.obolibrary.org/obo/RO_0004032 acts upstream of or within, positive effect c 'acts upstream of, positive effect' p if c is enables f, and f is causally upstream of p, and the direction of f is positive http://purl.obolibrary.org/obo/RO_0004035 acts upstream of, negative effect http://purl.obolibrary.org/obo/RO_0004033 acts upstream of or within, negative effect c 'acts upstream of, negative effect' p if c is enables f, and f is causally upstream of p, and the direction of f is negative http://purl.obolibrary.org/obo/BSPO_0030003 dorsalmost part of http://purl.obolibrary.org/obo/BSPO_0015101 in dorsal side of x dorsalmost_part_of y iff x part_of y and there is no z which is part_of y and is more dorsal than x but not part_of x; x is adjacent to the dorsal boundary of y http://purl.obolibrary.org/obo/RO_0002334 regulated by http://purl.obolibrary.org/obo/RO_0002427 causally downstream of or within inverse of regulates http://purl.obolibrary.org/obo/RO_0002335 negatively regulated by http://purl.obolibrary.org/obo/RO_0002334 regulated by inverse of negatively regulates http://purl.obolibrary.org/obo/RO_0002336 positively regulated by http://purl.obolibrary.org/obo/RO_0002334 regulated by inverse of positively regulates http://purl.obolibrary.org/obo/RO_0002427 causally downstream of or within http://purl.obolibrary.org/obo/RO_0002501 causal relation between processes inverse of causally upstream of or within http://purl.obolibrary.org/obo/RO_0002500 causal agent in process http://purl.obolibrary.org/obo/RO_0002595 causal relation between material entity and a process A relationship between a material entity and a process where the material entity has some causal role that influences the process http://purl.obolibrary.org/obo/RO_0002501 causal relation between processes http://purl.obolibrary.org/obo/RO_0002410 causally related to p is causally related to q if and only if p or any part of p and q or any part of q are linked by a chain of events where each event pair is one where the execution of p influences the execution of q. p may be upstream, downstream, part of, or a container of q. http://purl.obolibrary.org/obo/RO_0002584 has part structure that is capable of http://purl.obolibrary.org/obo/RO_0002595 causal relation between material entity and a process s 'has part structure that is capable of' p if and only if there exists some part x such that s 'has part' x and x 'capable of' p http://purl.obolibrary.org/obo/RO_0002595 causal relation between material entity and a process http://purl.obolibrary.org/obo/RO_0002410 causally related to A relationship that holds between a material entity and a process in which causality is involved, with either the material entity or some part of the material entity exerting some influence over the process, or the process influencing some aspect of the material entity. http://purl.obolibrary.org/obo/RO_0002596 capable of regulating http://purl.obolibrary.org/obo/RO_0002500 causal agent in process Holds between c and p if and only if c is capable of some activity a, and a regulates p. http://purl.obolibrary.org/obo/RO_0002597 capable of negatively regulating http://purl.obolibrary.org/obo/RO_0002596 capable of regulating Holds between c and p if and only if c is capable of some activity a, and a negatively regulates p. http://purl.obolibrary.org/obo/RO_0002598 capable of positively regulating http://purl.obolibrary.org/obo/RO_0002596 capable of regulating Holds between c and p if and only if c is capable of some activity a, and a positively regulates p. http://purl.obolibrary.org/obo/RO_0002608 process has causal agent http://purl.obolibrary.org/obo/RO_0002410 causally related to Inverse of 'causal agent in process' http://purl.obolibrary.org/obo/RO_0002015 has positive regulatory component activity http://purl.obolibrary.org/obo/RO_0002013 has regulatory component activity A relationship that holds between a GO molecular function and a component of that molecular function that positively regulates the activity of the whole. More formally, A 'has regulatory component activity' B iff :A and B are GO molecular functions (GO_0003674), A has_component B and A is positively regulated by B. http://purl.obolibrary.org/obo/RO_0002013 has regulatory component activity http://purl.obolibrary.org/obo/RO_0002017 has component activity A 'has regulatory component activity' B if A and B are GO molecular functions (GO_0003674), A has_component B and A is regulated by B. http://purl.obolibrary.org/obo/RO_0002014 has negative regulatory component activity http://purl.obolibrary.org/obo/RO_0002013 has regulatory component activity A relationship that holds between a GO molecular function and a component of that molecular function that negatively regulates the activity of the whole. More formally, A 'has regulatory component activity' B iff :A and B are GO molecular functions (GO_0003674), A has_component B and A is negatively regulated by B. http://purl.obolibrary.org/obo/RO_0002428 involved in regulation of http://purl.obolibrary.org/obo/RO_0002431 involved in or involved in regulation of c involved in regulation of p if c is involved in some p' and p' regulates some p http://purl.obolibrary.org/obo/RO_0002429 involved in positive regulation of http://purl.obolibrary.org/obo/RO_0002428 involved in regulation of c involved in regulation of p if c is involved in some p' and p' positively regulates some p http://purl.obolibrary.org/obo/RO_0002430 involved in negative regulation of http://purl.obolibrary.org/obo/RO_0002428 involved in regulation of c involved in regulation of p if c is involved in some p' and p' negatively regulates some p http://purl.obolibrary.org/obo/RO_0002578 directly regulates http://purl.obolibrary.org/obo/RO_0002211 regulates p directly regulates q iff p is immediately causally upstream of q and p regulates q. http://purl.obolibrary.org/obo/RO_0002629 directly positively regulates http://purl.obolibrary.org/obo/RO_0002578 directly regulates p directly positively regulates q iff p is immediately causally upstream of q, and p positively regulates q. http://purl.obolibrary.org/obo/RO_0002630 directly negatively regulates http://purl.obolibrary.org/obo/RO_0002578 directly regulates p directly negatively regulates q iff p is immediately causally upstream of q, and p negatively regulates q. http://purl.obolibrary.org/obo/RO_0002087 immediately preceded by http://purl.obolibrary.org/obo/BFO_0000062 preceded by starts_at_end_of http://purl.obolibrary.org/obo/RO_0002090 immediately precedes http://purl.obolibrary.org/obo/BFO_0000063 precedes meets http://purl.obolibrary.org/obo/RO_0002447 phosphorylates http://purl.obolibrary.org/obo/RO_0002436 molecularly interacts with An interaction relation between x and y in which x catalyzes a reaction in which a phosphate group is added to y. http://purl.obolibrary.org/obo/RO_0002405 immediately causally downstream of http://purl.obolibrary.org/obo/RO_0002404 causally downstream of http://purl.obolibrary.org/obo/RO_0002017 has component activity http://purl.obolibrary.org/obo/RO_0002018 has component process http://purl.obolibrary.org/obo/RO_0002559 causally influenced by http://purl.obolibrary.org/obo/RO_0002506 causal relation between entities http://purl.obolibrary.org/obo/RO_0002563 interaction relation helper property http://purl.obolibrary.org/obo/RO_0002464 helper property (not for use in curation) http://purl.obolibrary.org/obo/RO_0002564 molecular interaction relation helper property http://purl.obolibrary.org/obo/RO_0002563 interaction relation helper property http://purl.obolibrary.org/obo/RO_0002481 is kinase activity http://purl.obolibrary.org/obo/RO_0002564 molecular interaction relation helper property http://purl.obolibrary.org/obo/RO_0002086 ends after http://purl.obolibrary.org/obo/RO_0002222 temporally related to http://purl.obolibrary.org/obo/BSPO_0001113 preaxialmost part of http://purl.obolibrary.org/obo/BFO_0000050 part of http://purl.obolibrary.org/obo/BSPO_0001115 postaxialmost part of http://purl.obolibrary.org/obo/BFO_0000050 part of http://purl.obolibrary.org/obo/RO_0004033 acts upstream of or within, negative effect http://purl.obolibrary.org/obo/RO_0002264 acts upstream of or within http://purl.obolibrary.org/obo/RO_0004032 acts upstream of or within, positive effect http://purl.obolibrary.org/obo/RO_0002264 acts upstream of or within http://purl.obolibrary.org/obo/RO_0002022 directly regulated by http://purl.obolibrary.org/obo/RO_0002334 regulated by http://purl.obolibrary.org/obo/RO_0002506 causal relation between entities http://purl.obolibrary.org/obo/RO_0002410 causally related to http://purl.obolibrary.org/obo/RO_0004046 causally upstream of or within, negative effect http://purl.obolibrary.org/obo/RO_0002418 causally upstream of or within http://purl.obolibrary.org/obo/RO_0004047 causally upstream of or within, positive effect http://purl.obolibrary.org/obo/RO_0002418 causally upstream of or within http://purl.obolibrary.org/obo/RO_0000053 has characteristic is bearer of Inverse of characteristic_of http://purl.obolibrary.org/obo/RO_0000056 participates in participates_in a relation between a continuant and a process, in which the continuant is somehow involved in the process http://purl.obolibrary.org/obo/RO_0000057 has participant has_participant a relation between a process and a continuant, in which the continuant is somehow involved in the process http://purl.obolibrary.org/obo/BSPO_0015201 oral to nearer to the oral opening of the organism, on the oral-aboral axis. http://purl.obolibrary.org/obo/BSPO_0015202 aboral to nearer to the aboral opening of the organism, on the oral-aboral axis. http://purl.obolibrary.org/obo/RO_0017001 device utilizes material X device utilizes material Y means X and Y are material entities, and X is capable of some process P that has input Y. http://purl.obolibrary.org/obo/RO_0002434 interacts with A relationship that holds between two entities in which the processes executed by the two entities are causally connected. http://purl.obolibrary.org/obo/BSPO_0001102 parallel to x is parallel t y iff x and y are lines or planes which when extended indefinitely do not cross. http://purl.obolibrary.org/obo/BSPO_0000096 anterior to x anterior to y iff x is further along the antero-posterior axis than y, towards the head. An antero-posterior axis is an axis that extends through an organism from head end to opposite end of body or tail. http://purl.obolibrary.org/obo/BSPO_0000097 distal to x distal to y iff x is further along the proximo-distal axis than y, towards the appendage tip. A proximo-distal axis extends from tip of an appendage (distal) to where it joins the body (proximal). http://purl.obolibrary.org/obo/BSPO_0000098 dorsal to x dorsal to y iff x is further along the dorso-ventral axis than y, towards the back. A dorso-ventral axis is an axis that extends through an organism from back (e.g. spinal column) to front (e.g. belly). http://purl.obolibrary.org/obo/BSPO_0000099 posterior to x posterior to y iff x is further along the antero-posterior axis than y, towards the body/tail. An antero-posterior axis is an axis that extends through an organism from head end to opposite end of body or tail. http://purl.obolibrary.org/obo/BSPO_0000100 proximal to x proximal to y iff x is closer to the point of attachment with the body than y. http://purl.obolibrary.org/obo/BSPO_0000102 ventral to x ventral to y iff x is further along the dorso-ventral axis than y, towards the front. A dorso-ventral axis is an axis that extends through an organism from back (e.g. spinal column) to front (e.g. belly). http://purl.obolibrary.org/obo/BSPO_0000104 approximately perpendicular to Crosses at an angle that is 90 degrees, or close to 90 degrees. In any non-linear organism, the main axes are rarely perpendicular when taken through the organism as a whole. http://purl.obolibrary.org/obo/BSPO_0000105 ipsilateral to On the same side as. For example, the left arm is ipsilateral to the left leg. http://purl.obolibrary.org/obo/BSPO_0000107 deep to Further away from the surface of the organism. Thus, the muscular layer is deep to the skin, but superficial to the intestines. http://purl.obolibrary.org/obo/BSPO_0000108 superficial to Near the outer surface of the organism. Thus, skin is superficial to the muscle layer. http://purl.obolibrary.org/obo/BSPO_0000110 left of Closer to the left side of the organism. Example: The dorsal fin is right of the left pectoral fin, but is left of the right eye. On the type level: X left of Y <=> every instance x of X is left of some instance y of Y, and there exists some organism o such that x part of o and y part of o. http://purl.obolibrary.org/obo/BSPO_0000111 right of Closer to the right side of the organism. Example: The dorsal fin is right of the left pectoral fin, but is left of the right eye. On the type level: X left of Y <=> every instance x of X is right of some instance y of Y, and there exists some organism o such that x part of o and y part of o. http://purl.obolibrary.org/obo/BSPO_0000113 opposite to Direcly opposite to. i.e. on the opposite side through the axis. http://purl.obolibrary.org/obo/BSPO_0001114 postaxial to x preaxial to y iff x is further along the preaxial-postaxial axis than y, towards the postaxial side. http://purl.obolibrary.org/obo/BSPO_0015004 has end point A relation between an axis and a part of an organism, in which the part defines the initial point of the axis. http://purl.obolibrary.org/obo/BSPO_0015005 orthogonal to crossing at right angles http://purl.obolibrary.org/obo/BSPO_0015006 passes through Intersects at two points. http://purl.obolibrary.org/obo/BSPO_1000000 preaxial to x preaxial to y iff x is further along the preaxial-postaxial axis than y, towards the front. http://purl.obolibrary.org/obo/BSPO_0020002 has start point A relation between an axis and a part of an organism, in which the part defines the initial point of the axis. http://purl.obolibrary.org/obo/RO_0002323 mereotopologically related to A mereological relationship or a topological relationship http://purl.obolibrary.org/obo/RO_0002328 functionally related to A grouping relationship for any relationship directly involving a function, or that holds because of a function of one of the related entities. http://purl.obolibrary.org/obo/BSPO_0000114 lateral to X lateral to y if x is further from the midsagittal plane than y. http://purl.obolibrary.org/obo/RO_0002410 causally related to relation that links two events, processes, states, or objects such that one event, process, state, or object (a cause) contributes to the production of another event, process, state, or object (an effect) where the cause is partly or wholly responsible for the effect, and the effect is partly or wholly dependent on the cause. http://purl.obolibrary.org/obo/BSPO_0000115 X medial to y if x is closer to the midsagittal plane than y. http://purl.obolibrary.org/obo/RO_0002464 helper property (not for use in curation) http://purl.obolibrary.org/obo/BSPO_0000095 anatomical relation http://purl.obolibrary.org/obo/BSPO_0000101 obsolete surrounds http://purl.obolibrary.org/obo/BSPO_0000103 vicinity of http://purl.obolibrary.org/obo/BSPO_0000109 obsolete surrounded_by http://purl.obolibrary.org/obo/BSPO_0015001 finishes axis http://purl.obolibrary.org/obo/BSPO_0015002 follows axis http://purl.obolibrary.org/obo/BSPO_0015003 has axis http://purl.obolibrary.org/obo/BSPO_0015007 starts axis http://purl.obolibrary.org/obo/BSPO_0015008 surface of http://purl.obolibrary.org/obo/RO_0002222 temporally related to http://purl.obolibrary.org/obo/RO_0002502 depends on