Term IRI Term label Parent term IRI Parent term label Alternative term Definition http://purl.obolibrary.org/obo/PATO_0000001 quality http://purl.obolibrary.org/obo/BFO_0000020 specifically dependent continuant A dependent entity that inheres in a bearer by virtue of how the bearer is related to other entities http://purl.obolibrary.org/obo/FBbi_00001000 radiography http://purl.obolibrary.org/obo/FBbi_00000265 recorded image An imaging technique that uses high energy electromagnetic radiation, typically X-rays, as a source of illumination. http://purl.obolibrary.org/obo/FBbi_00001001 X-ray radiography http://purl.obolibrary.org/obo/FBbi_00001000 radiography Radiography using X-rays http://purl.obolibrary.org/obo/FBbi_00001003 X-ray tomography http://purl.obolibrary.org/obo/FBbi_00001004 tomography Tomography using X-ray illumination. http://purl.obolibrary.org/obo/FBbi_00001004 tomography http://purl.obolibrary.org/obo/FBbi_00000265 recorded image An imaging technique that creates virtual sections through the use of any kind of penetrating wave. http://purl.obolibrary.org/obo/FBbi_00001005 computed tomography http://purl.obolibrary.org/obo/FBbi_00001004 tomography Tomography in which virtual sections are taken from multiple angles and the results are processed via tomographic reconstruction software to produce 2 or 3D images. http://purl.obolibrary.org/obo/BFO_0000002 continuant http://purl.obolibrary.org/obo/BFO_0000001 entity An entity that exists in full at any time in which it exists at all, persists through time while maintaining its identity and has no temporal parts. http://purl.obolibrary.org/obo/BFO_0000003 occurrent http://purl.obolibrary.org/obo/BFO_0000001 entity An entity that has temporal parts and that happens, unfolds or develops through time. http://purl.obolibrary.org/obo/BFO_0000017 realizable entity http://purl.obolibrary.org/obo/BFO_0000020 specifically dependent continuant A specifically dependent continuant that inheres in continuant entities and are not exhibited in full at every time in which it inheres in an entity or group of entities. The exhibition or actualization of a realizable entity is a particular manifestation, functioning or process that occurs under certain circumstances. http://purl.obolibrary.org/obo/BFO_0000023 role http://purl.obolibrary.org/obo/BFO_0000017 realizable entity A realizable entity the manifestation of which brings about some result or end that is not essential to a continuant in virtue of the kind of thing that it is but that can be served or participated in by that kind of continuant in some kinds of natural, social or institutional contexts. http://purl.obolibrary.org/obo/BFO_0000040 material entity http://purl.obolibrary.org/obo/BFO_0000004 independent continuant An independent continuant that is spatially extended whose identity is independent of that of other entities and can be maintained through time. http://purl.obolibrary.org/obo/IAO_0000027 data entity http://purl.obolibrary.org/obo/IAO_0000030 information content entity An information content entity that is intended to be a truthful statement about something (modulo, e.g., measurement precision or other systematic errors) and is constructed/acquired by a method which reliably tends to produce (approximately) truthful statements. http://purl.obolibrary.org/obo/IAO_0000030 information content entity http://purl.obolibrary.org/obo/BFO_0000031 generically dependent continuant A generically dependent continuant that is about some thing. http://purl.obolibrary.org/obo/IAO_0000078 curation status specification http://purl.obolibrary.org/obo/IAO_0000102 data about an ontology part The curation status of the term. The allowed values come from an enumerated list of predefined terms. See the specification of these instances for more detailed definitions of each enumerated value. http://purl.obolibrary.org/obo/IAO_0000102 data about an ontology part http://purl.obolibrary.org/obo/IAO_0000027 data entity Data about an ontology part is a data item about a part of an ontology, for example a term http://purl.obolibrary.org/obo/IAO_0000225 obsolescence reason specification http://purl.obolibrary.org/obo/IAO_0000102 data about an ontology part The reason for which a term has been deprecated. The allowed values come from an enumerated list of predefined terms. See the specification of these instances for more detailed definitions of each enumerated value. http://purl.obolibrary.org/obo/IAO_0000409 denotator type http://purl.obolibrary.org/obo/IAO_0000102 data about an ontology part A denotator type indicates how a term should be interpreted from an ontological perspective. http://purl.obolibrary.org/obo/UBERON_0001062 anatomical entity http://purl.obolibrary.org/obo/BFO_0000004 independent continuant Biological entity that is either an individual member of a biological species or constitutes the structural organization of an individual member of a biological species. http://purl.obolibrary.org/obo/GO_0003674 gene product or complex activity http://purl.obolibrary.org/obo/BFO_0000015 process A molecular process that can be carried out by the action of a single macromolecular machine, usually via direct physical interactions with other molecular entities. Function in this sense denotes an action, or activity, that a gene product (or a complex) performs. http://purl.obolibrary.org/obo/GO_0008150 biological process http://purl.obolibrary.org/obo/BFO_0000015 process A biological process is the execution of a genetically-encoded biological module or program. It consists of all the steps required to achieve the specific biological objective of the module. A biological process is accomplished by a particular set of molecular functions carried out by specific gene products (or macromolecular complexes), often in a highly regulated manner and in a particular temporal sequence. http://purl.obolibrary.org/obo/GO_0016301 kinase activity http://purl.obolibrary.org/obo/GO_0003674 gene product or complex activity Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule. http://purl.obolibrary.org/obo/FBbi_00050000 focussed ion beam scanning electron microscopy (FIB-SEM) http://purl.obolibrary.org/obo/FBbi_00000373 back-scattered_electron imaging A method of reconstructing 3D structure by combining focussed ion beam milling to remove sucessive layers from a sample block with scanning EM to image the exposed surface between each milling step. http://purl.obolibrary.org/obo/FBbi_00100006 blue fluorescent protein tag http://purl.obolibrary.org/obo/FBbi_00000405 fluorescent protein tag A visualization method that detects a blue fluorescent protein tag. http://purl.obolibrary.org/obo/FBbi_00100008 cyan fluorescent protein tag http://purl.obolibrary.org/obo/FBbi_00000405 fluorescent protein tag A visualization method that detects a cyan fluorescent protein tag. http://purl.obolibrary.org/obo/FBbi_00100007 green fluorescent protein tag http://purl.obolibrary.org/obo/FBbi_00000405 fluorescent protein tag A visualization method that detects a green fluorescent protein tag. http://purl.obolibrary.org/obo/FBbi_00100009 yellow fluorescent protein tag http://purl.obolibrary.org/obo/FBbi_00000405 fluorescent protein tag A visualization method that detects a yellow fluorescent protein tag. http://purl.obolibrary.org/obo/FBbi_00100011 orange fluorescent protein tag http://purl.obolibrary.org/obo/FBbi_00000405 fluorescent protein tag A visualization method that detects an orange fluorescent protein tag. http://purl.obolibrary.org/obo/FBbi_00100012 red fluorescent protein tag http://purl.obolibrary.org/obo/FBbi_00000405 fluorescent protein tag A visualization method that detects a red fluorescent protein tag. http://purl.obolibrary.org/obo/FBbi_00100010 far-red fluorescent protein tag http://purl.obolibrary.org/obo/FBbi_00000405 fluorescent protein tag A visualization method that detects a far-red fluorescent protein tag. http://purl.obolibrary.org/obo/FBbi_00100018 optical anisotropy http://purl.obolibrary.org/obo/FBbi_00000590 source of contrast The property of a material whose refractive index depends on the polarization and propagation direction of light. http://purl.obolibrary.org/obo/FBbi_00100000 SNAP-tag http://purl.obolibrary.org/obo/FBbi_00000079 genetically encoded tag A visualization method that detects a protein self-labelled with a SNAP-tag. A SNAP-tag is an engineered version of the mammalian enzyme AGT that can covalently bind O6-benzylguanine-based ligands. http://purl.obolibrary.org/obo/FBbi_00100001 HaloTag http://purl.obolibrary.org/obo/FBbi_00000079 genetically encoded tag A visualization method that detects a protein self-labelled with a HaloTag. A HaloTag is a haloalkane dehydrogenase that can covalently bind a fluorescent synthetic ligand. http://purl.obolibrary.org/obo/FBbi_00100002 autofluorescence http://purl.obolibrary.org/obo/FBbi_00000397 visualization by chemical attribute A visualization method that detects the natural fluorescence emitted by endogenous biological structures or compounds. http://purl.obolibrary.org/obo/FBbi_00100003 chlorophyll autofluorescence http://purl.obolibrary.org/obo/FBbi_00100002 autofluorescence A visualization method that detects the fluorescence emitted by chlorophyll. http://purl.obolibrary.org/obo/FBbi_00100004 mTurquoise http://purl.obolibrary.org/obo/FBbi_00000436 cyan fluorescent protein from Aequorea A visualization method that detects proteins labeled with the mTurquoise fluorescent protein tag from Aequorea victoria. http://purl.obolibrary.org/obo/FBbi_00100005 mScarlet http://purl.obolibrary.org/obo/FBbi_00100012 red fluorescent protein tag A visualization method that detects proteins labeled with the mScarlet monomeric red fluorescent protein tag. http://purl.obolibrary.org/obo/FBbi_00100013 wide-field fluorescence microscopy http://purl.obolibrary.org/obo/FBbi_00000246 fluorescence microscopy A mode of fluorescence microscopy where the entire observed field is illuminated. http://purl.obolibrary.org/obo/FBbi_00100014 cryogenic transmission electron microscopy http://purl.obolibrary.org/obo/FBbi_00000258 transmission electron microscopy A form of transmission electron microscopy in which the specimen is maintained in a vitrified state at cryogenic temperature throughout imaging. The specimen is rapidly frozen to preserve its native structure in amorphous ice, avoiding the artefacts associated with chemical fixation, dehydration, and staining. Imaging is performed with the specimen held at cryogenic temperature in a transmission electron microscope. http://purl.obolibrary.org/obo/FBbi_00100015 cryogenic electron tomography http://purl.obolibrary.org/obo/FBbi_00100014 cryogenic transmission electron microscopy A form of electron tomography in which a cryo-preserved specimen is tilted incrementally in a cryogenic transmission electron microscope to acquire a series of two-dimensional projection images (tilt series), which are then computationally aligned and reconstructed into a three-dimensional volume (tomogram). http://purl.obolibrary.org/obo/FBbi_00100016 cryogenic scanning electron microscopy http://purl.obolibrary.org/obo/FBbi_00000257 scanning electron microscopy (SEM) A form of scanning electron microscopy in which the sample is maintained in a vitrified state at cryogenic temperatures throughout imaging. Sample preservation is achieved through rapid freezing, resulting in vitreous ice formation, which captures native structures while avoiding chemical artifacts. Imaging occurs in a scanning electron microscope while the sample is held at cryogenic temperatures. http://purl.obolibrary.org/obo/FBbi_00100017 cryogenic serial block face scanning electron microscopy http://purl.obolibrary.org/obo/FBbi_00000585 serial block face SEM (SBFSEM) Cryogenic serial block-face scanning electron microscopy is a volumetric imaging technique in which the surface of a biological specimen preserved in its near-native, vitrified state is imaged by a scanning electron microscope, then ablated by a focused ion beam (FIB-SEM) to reveal a new surface, enabling three-dimensional ultrastructural reconstruction of cells and tissues without the artifacts introduced by chemical fixation or resin embedding. http://purl.obolibrary.org/obo/FBbi_00000025 living tissue http://purl.obolibrary.org/obo/FBbi_00000014 unfixed tissue Unfixed fully hydrated tissue, typically employed to monitor dynamic changes in the living state. http://purl.obolibrary.org/obo/FBbi_00000037 eosin http://purl.obolibrary.org/obo/FBbi_00000460 non-specific protein affinity Staining with an aqueous or alcoholic solution of eosin Y,colors eosinophilic structures in various shades of red, pink and orange. The eosinophilic structures are generally composed of intracellular or extracellular protein. The Lewy bodies and Mallory bodies are examples of eosinophilic structures. Most of the cytoplasm is eosinophilic. Red blood cells are stained intensely red. http://purl.obolibrary.org/obo/FBbi_00000041 hematoxylin http://purl.obolibrary.org/obo/FBbi_00000460 non-specific protein affinity The staining method involves application of hemalum, which is a complex formed from aluminium ions and oxidized haematoxylin. This colors nuclei of cells (and a few other objects, such as keratohyalin granules) blue. The staining of nuclei by hemalum does not require the presence of DNA and is probably due to binding of the dye-metal complex to arginine-rich basic nucleoproteins such as histones. The mechanism is different from that of nuclear staining by basic (cationic) dyes such as thionine or toluidine blue. Staining by basic dyes is prevented by chemical or enzymatic extraction of nucleic acids. Such extractions do not prevent staining of nuclei by hemalum. http://purl.obolibrary.org/obo/FBbi_00000088 intracellular filling http://purl.obolibrary.org/obo/FBbi_00000396 visualization of contiguous regions Visualization of the connected regions of a cell by filling with a label http://purl.obolibrary.org/obo/FBbi_00000089 tissue in vitreous ice embedment http://purl.obolibrary.org/obo/FBbi_00000015 embedded tissue Fully hydrated tissue rapidly frozen to produce vitrified water, and maintained continuously below the glass transition temperature of water (approximately -137 deg C http://purl.obolibrary.org/obo/FBbi_00000093 permeabilized tissue http://purl.obolibrary.org/obo/FBbi_00000001 sample preparation method Tissue treated to make cell membranes permeable, typically for the purpose of allowing access by exogenous stains or substrates. http://purl.obolibrary.org/obo/FBbi_00000129 glycerol permeabilized http://purl.obolibrary.org/obo/FBbi_00000093 permeabilized tissue Tissue made permeable by the action of glycerol http://purl.obolibrary.org/obo/FBbi_00000240 macroscopy http://purl.obolibrary.org/obo/FBbi_00000265 recorded image Methods for imaging objects large enough to be observed by the unaided eye http://purl.obolibrary.org/obo/FBbi_00000241 microscopy http://purl.obolibrary.org/obo/FBbi_00000265 recorded image Methods for forming images of objects too small to be observed with the unaided eye http://purl.obolibrary.org/obo/FBbi_00000244 dark-field microscopy http://purl.obolibrary.org/obo/FBbi_00000345 light microscopy Imaging with rejection of the unscattered illumination (removal of the zero order component of the diffracted wave) http://purl.obolibrary.org/obo/FBbi_00000248 polarization microscopy http://purl.obolibrary.org/obo/FBbi_00000345 light microscopy A form of light microscopy that uses polarized light. Such form can be used to image samples that exibit optical anisotropy. http://purl.obolibrary.org/obo/FBbi_00000257 scanning electron microscopy (SEM) http://purl.obolibrary.org/obo/FBbi_00000256 electron microscopy Image is formed by scanning the surface of the specimen with a beam of electrons in a raster pattern http://purl.obolibrary.org/obo/FBbi_00000259 atomic force microscopy http://purl.obolibrary.org/obo/FBbi_00000344 scanning probe microscopy The scanning probe is maintained at a fixed distance above the surface e of the specimen by van der Waals forces http://purl.obolibrary.org/obo/FBbi_00000262 detergent permeabilized http://purl.obolibrary.org/obo/FBbi_00000093 permeabilized tissue Membrane permeabilization by the action of ionic or non-ionic detergents http://purl.obolibrary.org/obo/FBbi_00000263 solvent permeabilized http://purl.obolibrary.org/obo/FBbi_00000093 permeabilized tissue Permeabilization due to extraction of lipid from membranes by an organic solvent such as acetone or methanol. http://purl.obolibrary.org/obo/FBbi_00000264 saponin permeabilized http://purl.obolibrary.org/obo/FBbi_00000093 permeabilized tissue Saponin, a detergent-like molecule, preferentially forms holes in membranes that contain cholesterol. http://purl.obolibrary.org/obo/FBbi_00000265 recorded image http://purl.obolibrary.org/obo/FBbi_00000222 imaging method Methods and devices used for capturing an image of a real object; distinct from images created by artwork http://purl.obolibrary.org/obo/FBbi_00000266 portrayed image http://purl.obolibrary.org/obo/FBbi_00000222 imaging method Methods and devices used for creating images by some form of artwork, as distinct from capturing images by means of some recording device http://purl.obolibrary.org/obo/FBbi_00000267 animation http://purl.obolibrary.org/obo/FBbi_00000224 computer graphic A form of graphical illustration that changes with time to give a sense of motion or represent dynamic changes in the portrayal. http://purl.obolibrary.org/obo/FBbi_00000268 illumination method http://purl.obolibrary.org/obo/FBbi_root_00000000 method involved in biological imaging Sources and methods for illumination http://purl.obolibrary.org/obo/FBbi_00000269 detection method http://purl.obolibrary.org/obo/FBbi_root_00000000 method involved in biological imaging Media and devices employed for recording the alterations in the illumination that result from its interaction with the sample http://purl.obolibrary.org/obo/FBbi_00000270 imaged parameter http://purl.obolibrary.org/obo/FBbi_root_00000000 method involved in biological imaging The physical property of the specimen that leads to the modifications of the illumination that are recorded in the image. http://purl.obolibrary.org/obo/FBbi_00000277 widefield illumination http://purl.obolibrary.org/obo/FBbi_00000268 illumination method Illumination that covers the entire field of view of the image-forming lens http://purl.obolibrary.org/obo/FBbi_00000278 narrowfield illumination http://purl.obolibrary.org/obo/FBbi_00000268 illumination method Illumination restricted to a small portion of the field of view of the imaging lens; often one or more diffraction limited spots http://purl.obolibrary.org/obo/FBbi_00000284 pulsed illumination http://purl.obolibrary.org/obo/FBbi_00000268 illumination method Illumination that varies with time; often achieved with pulsed lasers for the purpose of generating very-high peak illumination power http://purl.obolibrary.org/obo/FBbi_00000286 single point scanning http://purl.obolibrary.org/obo/FBbi_00000278 narrowfield illumination Illumination by a single spot of light that is scanned across the field of view http://purl.obolibrary.org/obo/FBbi_00000287 multiple point scanning http://purl.obolibrary.org/obo/FBbi_00000278 narrowfield illumination Illumination by multiple points of light simultaneously http://purl.obolibrary.org/obo/FBbi_00000288 spinning disk scanning http://purl.obolibrary.org/obo/FBbi_00000287 multiple point scanning Scanning by multiple points of light arising from pinholes in a spinning disk that is illuminated by a widefield source http://purl.obolibrary.org/obo/FBbi_00000289 array scanning http://purl.obolibrary.org/obo/FBbi_00000287 multiple point scanning Multiple points of illumination generated by a fixed array of sources. http://purl.obolibrary.org/obo/FBbi_00000290 hollow-cone illumination http://purl.obolibrary.org/obo/FBbi_00000285 oblique illumination Illumination parallel or at small angles to the optical axis is attenuated or blocked by a stop http://purl.obolibrary.org/obo/FBbi_00000291 anaxial illumination http://purl.obolibrary.org/obo/FBbi_00000285 oblique illumination Illumination is distributed asymmetrically around the optic axis, typically achieved by a non-circular stop placed below the lower lens element and aperture of the condenser. http://purl.obolibrary.org/obo/FBbi_00000292 darkfield illumination http://purl.obolibrary.org/obo/FBbi_00000290 hollow-cone illumination Illumination restricted to angles that exceed the acceptance angle of the image-forming lens http://purl.obolibrary.org/obo/FBbi_00000293 Rheinberg illumination http://purl.obolibrary.org/obo/FBbi_00000290 hollow-cone illumination Illumination at angles less than the acceptance angle of the image-forming lens is attenuated by a filter to give a colored background of unscattered light; higher angle illumination may be filtered to give a contrasting color http://purl.obolibrary.org/obo/FBbi_00000309 inelastic scattering http://purl.obolibrary.org/obo/FBbi_00000270 imaged parameter A form of particle scattering in which the energy of the scattered particle is different from that of the incident particle (contrary to elastic scattering, where the energy remains the same). http://purl.obolibrary.org/obo/FBbi_00000321 resolution-enhancing method http://purl.obolibrary.org/obo/FBbi_root_00000000 method involved in biological imaging Methods for increasing the resolution beyond the classical Abbe diffraction limit http://purl.obolibrary.org/obo/FBbi_00000326 Wollaston prism http://purl.obolibrary.org/obo/FBbi_00000322 optical method A birefringent optical element typically used to split polarized illumination into two sets of parallel but displaced rays http://purl.obolibrary.org/obo/FBbi_00000340 saturated structured-illumination microscopy (SSIM) http://purl.obolibrary.org/obo/FBbi_00000332 structured illumination microscopy (SIM) Structured illumination used at sufficiently high power to cause significant ground-state depletion of the imaged fluorophore, thus allowing for non-linear resolution enhancement http://purl.obolibrary.org/obo/FBbi_00000344 scanning probe microscopy http://purl.obolibrary.org/obo/FBbi_00000241 microscopy Imaging by means of a physical probe that passes over the sample http://purl.obolibrary.org/obo/FBbi_00000349 ANSOM http://purl.obolibrary.org/obo/FBbi_00000348 nearfield scanning optical microscopy (ANSOM) Aperture-less NSOM. http://purl.obolibrary.org/obo/FBbi_00000350 polarized light illumination http://purl.obolibrary.org/obo/FBbi_00000272 illumination by photons An illumination method in which the sample is illuminated by light waves of only one polarization, instead of a mix of waves of various polarizations. http://purl.obolibrary.org/obo/FBbi_00000352 polarization-sensitive detection http://purl.obolibrary.org/obo/FBbi_00000269 detection method A detection method that only detects light that has a specific polarization. http://purl.obolibrary.org/obo/FBbi_00000353 modified objective lens http://purl.obolibrary.org/obo/FBbi_00000322 optical method Uses an objective with extra components to manipulate the wave front in the plane of the objective aperture. http://purl.obolibrary.org/obo/FBbi_00000354 linear method http://purl.obolibrary.org/obo/FBbi_00000323 computational method A computational method that is linear in the mathematical sense, meaning that image intensity is conserved and the data remain suitable for all quantitative analyses http://purl.obolibrary.org/obo/FBbi_00000355 non-linear method http://purl.obolibrary.org/obo/FBbi_00000323 computational method Computational method that are mathematically non-linear; image intensity is not conserved, and the data are in general not suitable for quantitative analyses of pixel values http://purl.obolibrary.org/obo/FBbi_00000364 light-sheet illumination http://purl.obolibrary.org/obo/FBbi_00000285 oblique illumination Illumination in the form of a thin sheet of light directed perpendicular to the optic axis http://purl.obolibrary.org/obo/FBbi_00000365 FLIP http://purl.obolibrary.org/obo/FBbi_00000246 fluorescence microscopy Fluorescence loss in photobleaching; a method of determining whether two populations of fluorophore are in diffusive communication with one another by observing the decrease in brightness of one population when the other population is subjected to continuous photobleaching. http://purl.obolibrary.org/obo/FBbi_00000366 FRAP http://purl.obolibrary.org/obo/FBbi_00000365 FLIP Fluorescence loss in photobleaching; a method of determining the rate and extent of exchange between a localized population of fluorophore and a non-localized diffusible pool, by observing the rate of recovery of brightness of the localized population after photobleaching. http://purl.obolibrary.org/obo/FBbi_00000367 FRET http://purl.obolibrary.org/obo/FBbi_00000246 fluorescence microscopy Fluorescence (or Forster) resonance energy transfer; a method of estimating the distance between two fluorophores by measuring the extent of non-radiative energy transfer between the two. Experimentally, this involves selective excitation of one while observing emission from the other. http://purl.obolibrary.org/obo/FBbi_00000368 fluorescence lifetime imaging microscopy http://purl.obolibrary.org/obo/FBbi_00000246 fluorescence microscopy A fluorescence microscopy method in which the image contrast is derived from the fluorescence lifetime at each point in a two-dimensional image and not the local concentration and/or intensity of the fluorophore. http://purl.obolibrary.org/obo/FBbi_00000369 selective plane illumination fluorescence microscopy http://purl.obolibrary.org/obo/FBbi_00000246 fluorescence microscopy A fluorescence microscopy method where the sample is illuminated from the side in a well-defined volume around the focal plane of the detection optics. http://purl.obolibrary.org/obo/FBbi_00000370 coherent Raman anti-Stokes microscopy http://purl.obolibrary.org/obo/FBbi_00000345 light microscopy A form of microscopy that can detect molecularly specific contrasts based on the vibrational spectra of the sample molecules, by producing and detecting Raman-scattered photons. http://purl.obolibrary.org/obo/FBbi_00000371 OCT http://purl.obolibrary.org/obo/FBbi_00000345 light microscopy Optical coherence tomography; an interferometric method of imaging using back-scattered photons (elastic scattering) http://purl.obolibrary.org/obo/FBbi_00000372 secondary_electron imaging http://purl.obolibrary.org/obo/FBbi_00000257 scanning electron microscopy (SEM) Image created using the electrons generated by ionization of a sample due to inelastic scattering of the primary beam of radiation http://purl.obolibrary.org/obo/FBbi_00000373 back-scattered_electron imaging http://purl.obolibrary.org/obo/FBbi_00000257 scanning electron microscopy (SEM) Imaged formed using electrons undergoing elastic scattering at very high angles, with emission of characteristic X-rays http://purl.obolibrary.org/obo/FBbi_00000383 specimen_modifying_illumination http://purl.obolibrary.org/obo/FBbi_00000268 illumination method Illumination used for the purpose of inducing some observable change in the specimen during the course of an imaging session. This illumination may or may not be the same as the illumination used for imaging. Typically used in conjunction with live-cell imaging http://purl.obolibrary.org/obo/FBbi_00000391 slit-scanning illumination http://purl.obolibrary.org/obo/FBbi_00000278 narrowfield illumination Illumination in the shape of a thin line that is swept over the field of view http://purl.obolibrary.org/obo/FBbi_00000392 slit-scan confocal microscopy http://purl.obolibrary.org/obo/FBbi_00000251 confocal microscopy Illumination and detection via a thin slit http://purl.obolibrary.org/obo/FBbi_00000393 array-scan confocal microscopy http://purl.obolibrary.org/obo/FBbi_00000251 confocal microscopy Fixed array of sources focused to an array of spots that is swept over the specimen in raster fashion http://purl.obolibrary.org/obo/FBbi_00000396 visualization of contiguous regions http://purl.obolibrary.org/obo/FBbi_00000031 visualization method Methods of visualization that differentiate between different regions or surfaces of the specimen based on contiguity http://purl.obolibrary.org/obo/FBbi_00000397 visualization by chemical attribute http://purl.obolibrary.org/obo/FBbi_00000031 visualization method Methods of visualization that differentiate regions of the specimen on the basis of their chemical properties http://purl.obolibrary.org/obo/FBbi_00000398 shadowing and plating http://purl.obolibrary.org/obo/FBbi_00000396 visualization of contiguous regions Visualization by depositing a label on the surface of a specimen uniformly (plating), or from a particular direction so that surface topography becomes visible (shadowing) http://purl.obolibrary.org/obo/FBbi_00000399 negative staining http://purl.obolibrary.org/obo/FBbi_00000396 visualization of contiguous regions Visualization by exclusion of a stain in which the specimen is immersed; compare with "positive staining. http://purl.obolibrary.org/obo/FBbi_00000453 TexasRed http://purl.obolibrary.org/obo/FBbi_00000455 fluorescent label Fluorophore with ex/em 589/615 http://purl.obolibrary.org/obo/FBbi_00000454 Tetramethyl rhodamine (TRITC) http://purl.obolibrary.org/obo/FBbi_00000455 fluorescent label Fluorophore derivative of rhodamine with ex/em 547/572 http://purl.obolibrary.org/obo/FBbi_00000579 isolated subcellular component http://purl.obolibrary.org/obo/FBbi_00000001 sample preparation method A fragment of a cell, subcellular organelle, or macromolecular complex. http://purl.obolibrary.org/obo/FBbi_00000580 secondary electron generation http://purl.obolibrary.org/obo/FBbi_00000270 imaged parameter Electrons generated by inelastic scattering of other radiation, the primary radiation. http://purl.obolibrary.org/obo/FBbi_00000581 critical_point dried specimen http://purl.obolibrary.org/obo/FBbi_00000013 cryofixed tissue Specimen from which water has been removed by a process that avoids liquid-gas and solid-gas phase transitions. http://purl.obolibrary.org/obo/FBbi_00000582 unprocessed raw data http://purl.obolibrary.org/obo/FBbi_00000323 computational method Data as acquired, with no alterations that change the pixel values. http://purl.obolibrary.org/obo/FBbi_00000583 lyophilized specimen http://purl.obolibrary.org/obo/FBbi_00000013 cryofixed tissue Specimen from which water has been removed by evaporation under vacuum at a temperature below freezing. http://purl.obolibrary.org/obo/FBbi_00000584 X-Rhodamine http://purl.obolibrary.org/obo/FBbi_00000455 fluorescent label Fluorophore derivative of rhodamine with ex/em 580/605 http://purl.obolibrary.org/obo/FBbi_00000585 serial block face SEM (SBFSEM) http://purl.obolibrary.org/obo/FBbi_00000373 back-scattered_electron imaging A method of reconstructing 3D structure by combining serial sectioning with scanning EM. http://purl.obolibrary.org/obo/FBbi_00000589 Raman scattering http://purl.obolibrary.org/obo/FBbi_00000309 inelastic scattering The inelastic scattering of photons caused by interaction with matter. http://purl.obolibrary.org/obo/FBbi_00000590 source of contrast http://purl.obolibrary.org/obo/FBbi_root_00000000 method involved in biological imaging The source of the variation in the imaged parameter across the field of view. http://purl.obolibrary.org/obo/FBbi_00000593 form birefringence http://purl.obolibrary.org/obo/FBbi_00100018 optical anisotropy An optical anisotropy that is caused by the arrangement of structures with different refractive indexes, on a scale smaller than a wavelength. http://purl.obolibrary.org/obo/FBbi_00000594 intrinsic birefringence http://purl.obolibrary.org/obo/FBbi_00100018 optical anisotropy An optical anisotropy that is a constant, intrinsic property of the material. http://purl.obolibrary.org/obo/FBbi_00000595 stress-induced birefringence http://purl.obolibrary.org/obo/FBbi_00100018 optical anisotropy An optical anisotropy that is the result of mechanical stress in an otherwise isotropic material. http://purl.obolibrary.org/obo/FBbi_00000603 fluorescence polarization microscopy http://purl.obolibrary.org/obo/FBbi_00000248 polarization microscopy A mode of microscopy that detects the rotational motion of fluorophores. http://purl.obolibrary.org/obo/FBbi_00000619 evanescent wave microscopy nearfield illumination http://purl.obolibrary.org/obo/FBbi_00000281 nearfield illumination A nearfield illumination method that uses evanescent wave microscopy. http://purl.obolibrary.org/obo/FBbi_00000620 evanescent wave scattering nearfield illumination http://purl.obolibrary.org/obo/FBbi_00000281 nearfield illumination A nearfield illumination method that uses evanescent wave scattering. http://purl.obolibrary.org/obo/FBbi_00000260 X-ray microscopy http://purl.obolibrary.org/obo/FBbi_00000241 microscopy http://purl.obolibrary.org/obo/FBbi_00001002 X-ray computed tomography http://purl.obolibrary.org/obo/FBbi_00001005 computed tomography http://purl.obolibrary.org/obo/FBbi_00001007 gamma ray illumination http://purl.obolibrary.org/obo/FBbi_00001006 x-ray/gamma ray illumination http://purl.obolibrary.org/obo/FBbi_00000342 X-ray illumination http://purl.obolibrary.org/obo/FBbi_00001006 x-ray/gamma ray illumination http://purl.obolibrary.org/obo/FBbi_00000002 chemically fixed tissue http://purl.obolibrary.org/obo/FBbi_00001012 fixation method http://purl.obolibrary.org/obo/FBbi_00000013 cryofixed tissue http://purl.obolibrary.org/obo/FBbi_00001012 fixation method http://purl.obolibrary.org/obo/FBbi_00000014 unfixed tissue http://purl.obolibrary.org/obo/FBbi_00001012 fixation method http://purl.obolibrary.org/obo/FBbi_00000609 heat fixed tissue http://purl.obolibrary.org/obo/FBbi_00001012 fixation method http://purl.obolibrary.org/obo/BFO_0000004 independent continuant http://purl.obolibrary.org/obo/BFO_0000002 continuant http://purl.obolibrary.org/obo/BFO_0000020 specifically dependent continuant http://purl.obolibrary.org/obo/BFO_0000002 continuant http://purl.obolibrary.org/obo/BFO_0000031 generically dependent continuant http://purl.obolibrary.org/obo/BFO_0000002 continuant http://purl.obolibrary.org/obo/BFO_0000015 process http://purl.obolibrary.org/obo/BFO_0000003 occurrent http://purl.obolibrary.org/obo/BFO_0000034 function http://purl.obolibrary.org/obo/BFO_0000016 disposition http://purl.obolibrary.org/obo/BFO_0000016 disposition http://purl.obolibrary.org/obo/BFO_0000017 realizable entity http://purl.obolibrary.org/obo/BFO_0000019 quality http://purl.obolibrary.org/obo/BFO_0000020 specifically dependent continuant http://purl.obolibrary.org/obo/FBbi_00000435 blue fluorescent protein from Aequorea http://purl.obolibrary.org/obo/FBbi_00000420 fluorescent protein derived from Aequorea http://purl.obolibrary.org/obo/FBbi_00000479 blue fluorescent proteins from Anthozoa http://purl.obolibrary.org/obo/FBbi_00000433 fluorescent protein derived from Anthozoa http://purl.obolibrary.org/obo/FBbi_00000436 cyan fluorescent protein from Aequorea http://purl.obolibrary.org/obo/FBbi_00000420 fluorescent protein derived from Aequorea http://purl.obolibrary.org/obo/FBbi_00000480 cyan fluorescent proteins from Anthozoa http://purl.obolibrary.org/obo/FBbi_00000433 fluorescent protein derived from Anthozoa http://purl.obolibrary.org/obo/FBbi_00000615 miniSOG http://purl.obolibrary.org/obo/FBbi_00000612 fluorescent protein derived from Arabidopsis http://purl.obolibrary.org/obo/FBbi_00000437 green fluorescent protein from Aequorea http://purl.obolibrary.org/obo/FBbi_00000420 fluorescent protein derived from Aequorea http://purl.obolibrary.org/obo/FBbi_00000481 green fluorescent proteins from Anthozoa http://purl.obolibrary.org/obo/FBbi_00000433 fluorescent protein derived from Anthozoa http://purl.obolibrary.org/obo/FBbi_00000439 yellow fluorescent protein from Aequorea http://purl.obolibrary.org/obo/FBbi_00000420 fluorescent protein derived from Aequorea http://purl.obolibrary.org/obo/FBbi_00000485 yellow fluorescent proteins from Anthozoa http://purl.obolibrary.org/obo/FBbi_00000433 fluorescent protein derived from Anthozoa http://purl.obolibrary.org/obo/FBbi_00000482 orange fluorescent proteins from Anthozoa http://purl.obolibrary.org/obo/FBbi_00000433 fluorescent protein derived from Anthozoa http://purl.obolibrary.org/obo/FBbi_00000483 red fluorescent proteins from Anthozoa http://purl.obolibrary.org/obo/FBbi_00000433 fluorescent protein derived from Anthozoa http://purl.obolibrary.org/obo/FBbi_00000484 far-red fluorescent proteins from Anthozoa http://purl.obolibrary.org/obo/FBbi_00000433 fluorescent protein derived from Anthozoa http://purl.obolibrary.org/obo/FBbi_00001012 fixation method http://purl.obolibrary.org/obo/FBbi_00000001 sample preparation method http://purl.obolibrary.org/obo/FBbi_00000015 embedded tissue http://purl.obolibrary.org/obo/FBbi_00000001 sample preparation method http://purl.obolibrary.org/obo/FBbi_00000023 unembedded tissue http://purl.obolibrary.org/obo/FBbi_00000001 sample preparation method http://purl.obolibrary.org/obo/FBbi_00000024 whole mounted tissue http://purl.obolibrary.org/obo/FBbi_00000001 sample preparation method http://purl.obolibrary.org/obo/FBbi_00000026 sectioned tissue http://purl.obolibrary.org/obo/FBbi_00000001 sample preparation method http://purl.obolibrary.org/obo/FBbi_00000611 dispersed cells in vitro http://purl.obolibrary.org/obo/FBbi_00000001 sample preparation method http://purl.obolibrary.org/obo/FBbi_00000003 coagulating-fixative fixed tissue http://purl.obolibrary.org/obo/FBbi_00000263 solvent permeabilized http://purl.obolibrary.org/obo/FBbi_00000008 crosslinking-fixative fixed tissue http://purl.obolibrary.org/obo/FBbi_00000002 chemically fixed tissue http://purl.obolibrary.org/obo/FBbi_00000004 acetone fixed tissue http://purl.obolibrary.org/obo/FBbi_00000003 coagulating-fixative fixed tissue http://purl.obolibrary.org/obo/FBbi_00000005 acrolein fixed tissue http://purl.obolibrary.org/obo/FBbi_00000003 coagulating-fixative fixed tissue http://purl.obolibrary.org/obo/FBbi_00000006 ethanol fixed tissue http://purl.obolibrary.org/obo/FBbi_00000003 coagulating-fixative fixed tissue http://purl.obolibrary.org/obo/FBbi_00000007 methanol fixed tissue http://purl.obolibrary.org/obo/FBbi_00000003 coagulating-fixative fixed tissue http://purl.obolibrary.org/obo/FBbi_00000009 ethylene glycol-bis-succinimidyl succinate fixed tissue http://purl.obolibrary.org/obo/FBbi_00000008 crosslinking-fixative fixed tissue http://purl.obolibrary.org/obo/FBbi_00000010 formaldehyde fixed tissue http://purl.obolibrary.org/obo/FBbi_00000008 crosslinking-fixative fixed tissue http://purl.obolibrary.org/obo/FBbi_00000011 glutaraldehyde fixed tissue http://purl.obolibrary.org/obo/FBbi_00000008 crosslinking-fixative fixed tissue http://purl.obolibrary.org/obo/FBbi_00000012 osmium tetroxide fixed tissue http://purl.obolibrary.org/obo/FBbi_00000008 crosslinking-fixative fixed tissue http://purl.obolibrary.org/obo/FBbi_00000419 freeze_fracture/freeze_etch http://purl.obolibrary.org/obo/FBbi_00000013 cryofixed tissue http://purl.obolibrary.org/obo/FBbi_00000621 freeze-substituted tissue http://purl.obolibrary.org/obo/FBbi_00000013 cryofixed tissue http://purl.obolibrary.org/obo/FBbi_00000016 tissue in plastic embedment http://purl.obolibrary.org/obo/FBbi_00000015 embedded tissue http://purl.obolibrary.org/obo/FBbi_00000019 tissue in wax embedment http://purl.obolibrary.org/obo/FBbi_00000015 embedded tissue http://purl.obolibrary.org/obo/FBbi_00000017 tissue in acrylic resin embedment http://purl.obolibrary.org/obo/FBbi_00000016 tissue in plastic embedment http://purl.obolibrary.org/obo/FBbi_00000018 tissue in epoxy resin embedment http://purl.obolibrary.org/obo/FBbi_00000016 tissue in plastic embedment http://purl.obolibrary.org/obo/FBbi_00000020 tissue in paraffin embedment http://purl.obolibrary.org/obo/FBbi_00000019 tissue in wax embedment http://purl.obolibrary.org/obo/FBbi_00000021 tissue in polyester wax embedment http://purl.obolibrary.org/obo/FBbi_00000019 tissue in wax embedment http://purl.obolibrary.org/obo/FBbi_00000022 tissue in polyethylene glycol embedment http://purl.obolibrary.org/obo/FBbi_00000019 tissue in wax embedment http://purl.obolibrary.org/obo/FBbi_00000027 cryostat-sectioned tissue http://purl.obolibrary.org/obo/FBbi_00000026 sectioned tissue http://purl.obolibrary.org/obo/FBbi_00000028 hand-sectioned tissue http://purl.obolibrary.org/obo/FBbi_00000026 sectioned tissue http://purl.obolibrary.org/obo/FBbi_00000029 microtome-sectioned tissue http://purl.obolibrary.org/obo/FBbi_00000026 sectioned tissue http://purl.obolibrary.org/obo/FBbi_00000030 vibratome-sectioned tissue http://purl.obolibrary.org/obo/FBbi_00000026 sectioned tissue http://purl.obolibrary.org/obo/FBbi_00000128 vizualization of label conjugated to probe http://purl.obolibrary.org/obo/FBbi_00000031 visualization method http://purl.obolibrary.org/obo/FBbi_00000077 beta-galactosidase http://purl.obolibrary.org/obo/FBbi_00000076 genetically encoded enzyme http://purl.obolibrary.org/obo/FBbi_00000078 beta-glucuronidase http://purl.obolibrary.org/obo/FBbi_00000076 genetically encoded enzyme http://purl.obolibrary.org/obo/FBbi_00000076 genetically encoded enzyme http://purl.obolibrary.org/obo/FBbi_00000079 genetically encoded tag http://purl.obolibrary.org/obo/FBbi_00000405 fluorescent protein tag http://purl.obolibrary.org/obo/FBbi_00000079 genetically encoded tag http://purl.obolibrary.org/obo/FBbi_00000407 small genetically encoded tag http://purl.obolibrary.org/obo/FBbi_00000079 genetically encoded tag http://purl.obolibrary.org/obo/FBbi_00000545 PA-CFP http://purl.obolibrary.org/obo/FBbi_00000536 photoactivatable fluorescent protein http://purl.obolibrary.org/obo/FBbi_00000544 PA-GFP http://purl.obolibrary.org/obo/FBbi_00000536 photoactivatable fluorescent protein http://purl.obolibrary.org/obo/FBbi_00000560 E2GFP http://purl.obolibrary.org/obo/FBbi_00000539 photoswitchable fluorescent protein http://purl.obolibrary.org/obo/FBbi_00000090 fluor labeled RNA fill http://purl.obolibrary.org/obo/FBbi_00000088 intracellular filling http://purl.obolibrary.org/obo/FBbi_00000094 fluor labeled protein fill http://purl.obolibrary.org/obo/FBbi_00000088 intracellular filling http://purl.obolibrary.org/obo/FBbi_00000118 miscellaneous fill http://purl.obolibrary.org/obo/FBbi_00000088 intracellular filling http://purl.obolibrary.org/obo/FBbi_00000404 fluorescent dextran fill http://purl.obolibrary.org/obo/FBbi_00000088 intracellular filling http://purl.obolibrary.org/obo/FBbi_00000091 5-SFX fluorescein RNA fill http://purl.obolibrary.org/obo/FBbi_00000090 fluor labeled RNA fill http://purl.obolibrary.org/obo/FBbi_00000092 X-rhodamine RNA fill http://purl.obolibrary.org/obo/FBbi_00000090 fluor labeled RNA fill http://purl.obolibrary.org/obo/FBbi_00000095 fluor conjugated actin fill http://purl.obolibrary.org/obo/FBbi_00000094 fluor labeled protein fill http://purl.obolibrary.org/obo/FBbi_00000109 fluor conjugated tubulin fill http://purl.obolibrary.org/obo/FBbi_00000094 fluor labeled protein fill http://purl.obolibrary.org/obo/FBbi_00000055 DiOC6 (3,3'-dihexyloxacarbocyanine iodide) http://purl.obolibrary.org/obo/FBbi_00000112 probe for lipid http://purl.obolibrary.org/obo/FBbi_00000060 Nile red http://purl.obolibrary.org/obo/FBbi_00000112 probe for lipid http://purl.obolibrary.org/obo/FBbi_00000113 DiA http://purl.obolibrary.org/obo/FBbi_00000112 probe for lipid http://purl.obolibrary.org/obo/FBbi_00000114 DiD http://purl.obolibrary.org/obo/FBbi_00000112 probe for lipid http://purl.obolibrary.org/obo/FBbi_00000115 DiI http://purl.obolibrary.org/obo/FBbi_00000112 probe for lipid http://purl.obolibrary.org/obo/FBbi_00000116 DiO http://purl.obolibrary.org/obo/FBbi_00000112 probe for lipid http://purl.obolibrary.org/obo/FBbi_00000117 DiR http://purl.obolibrary.org/obo/FBbi_00000112 probe for lipid http://purl.obolibrary.org/obo/FBbi_00000438 DiIC16 http://purl.obolibrary.org/obo/FBbi_00000112 probe for lipid http://purl.obolibrary.org/obo/FBbi_00000057 lucifer yellow http://purl.obolibrary.org/obo/FBbi_00000118 miscellaneous fill http://purl.obolibrary.org/obo/FBbi_00000119 biotin ethylenediamine fill http://purl.obolibrary.org/obo/FBbi_00000118 miscellaneous fill http://purl.obolibrary.org/obo/FBbi_00000120 cobalt fill http://purl.obolibrary.org/obo/FBbi_00000118 miscellaneous fill http://purl.obolibrary.org/obo/FBbi_00000121 silver-intensified cobalt fill http://purl.obolibrary.org/obo/FBbi_00000120 cobalt fill http://purl.obolibrary.org/obo/FBbi_00000123 [14]C http://purl.obolibrary.org/obo/FBbi_00000122 metabolically incorporated radioisotope http://purl.obolibrary.org/obo/FBbi_00000124 [32]P http://purl.obolibrary.org/obo/FBbi_00000122 metabolically incorporated radioisotope http://purl.obolibrary.org/obo/FBbi_00000125 [33]P http://purl.obolibrary.org/obo/FBbi_00000122 metabolically incorporated radioisotope http://purl.obolibrary.org/obo/FBbi_00000126 [35]S http://purl.obolibrary.org/obo/FBbi_00000122 metabolically incorporated radioisotope http://purl.obolibrary.org/obo/FBbi_00000127 [3]H http://purl.obolibrary.org/obo/FBbi_00000122 metabolically incorporated radioisotope http://purl.obolibrary.org/obo/FBbi_00000578 other radioisotope http://purl.obolibrary.org/obo/FBbi_00000122 metabolically incorporated radioisotope http://purl.obolibrary.org/obo/FBbi_00000455 fluorescent label http://purl.obolibrary.org/obo/FBbi_00000128 vizualization of label conjugated to probe http://purl.obolibrary.org/obo/FBbi_00000456 enzyme label http://purl.obolibrary.org/obo/FBbi_00000128 vizualization of label conjugated to probe http://purl.obolibrary.org/obo/FBbi_00000457 electron dense label http://purl.obolibrary.org/obo/FBbi_00000128 vizualization of label conjugated to probe http://purl.obolibrary.org/obo/FBbi_00000224 computer graphic http://purl.obolibrary.org/obo/FBbi_00000223 graphic illustration http://purl.obolibrary.org/obo/FBbi_00000228 camera lucida assisted graphic http://purl.obolibrary.org/obo/FBbi_00000223 graphic illustration http://purl.obolibrary.org/obo/FBbi_00000229 free hand graphic http://purl.obolibrary.org/obo/FBbi_00000223 graphic illustration http://purl.obolibrary.org/obo/FBbi_00000230 line art graphic http://purl.obolibrary.org/obo/FBbi_00000223 graphic illustration http://purl.obolibrary.org/obo/FBbi_00000225 black and white graphic http://purl.obolibrary.org/obo/FBbi_00000224 computer graphic http://purl.obolibrary.org/obo/FBbi_00000226 color graphic http://purl.obolibrary.org/obo/FBbi_00000224 computer graphic http://purl.obolibrary.org/obo/FBbi_00000227 grey scale graphic http://purl.obolibrary.org/obo/FBbi_00000224 computer graphic http://purl.obolibrary.org/obo/FBbi_00000231 charcoal pencil graphic http://purl.obolibrary.org/obo/FBbi_00000230 line art graphic http://purl.obolibrary.org/obo/FBbi_00000232 colored pencil graphic http://purl.obolibrary.org/obo/FBbi_00000230 line art graphic http://purl.obolibrary.org/obo/FBbi_00000233 graphite pencil graphic http://purl.obolibrary.org/obo/FBbi_00000230 line art graphic http://purl.obolibrary.org/obo/FBbi_00000234 pen and ink graphic http://purl.obolibrary.org/obo/FBbi_00000230 line art graphic http://purl.obolibrary.org/obo/FBbi_00000235 painted graphic http://purl.obolibrary.org/obo/FBbi_00000230 line art graphic http://purl.obolibrary.org/obo/FBbi_00000236 acrylic painted graphic http://purl.obolibrary.org/obo/FBbi_00000235 painted graphic http://purl.obolibrary.org/obo/FBbi_00000237 oil painted graphic http://purl.obolibrary.org/obo/FBbi_00000235 painted graphic http://purl.obolibrary.org/obo/FBbi_00000238 pastel painted graphic http://purl.obolibrary.org/obo/FBbi_00000235 painted graphic http://purl.obolibrary.org/obo/FBbi_00000239 watercolor painted graphic http://purl.obolibrary.org/obo/FBbi_00000235 painted graphic http://purl.obolibrary.org/obo/FBbi_00000343 microscopy with lenses http://purl.obolibrary.org/obo/FBbi_00000241 microscopy http://purl.obolibrary.org/obo/FBbi_00000616 evanescent wave scattering http://purl.obolibrary.org/obo/FBbi_00000244 dark-field microscopy http://purl.obolibrary.org/obo/FBbi_00000251 confocal microscopy http://purl.obolibrary.org/obo/FBbi_00000246 fluorescence microscopy http://purl.obolibrary.org/obo/FBbi_00000255 multi-photon microscopy http://purl.obolibrary.org/obo/FBbi_00000246 fluorescence microscopy http://purl.obolibrary.org/obo/FBbi_00000617 evanescent wave microscopy http://purl.obolibrary.org/obo/FBbi_00000246 fluorescence microscopy http://purl.obolibrary.org/obo/FBbi_00000351 orientation-independent polarization microscopy http://purl.obolibrary.org/obo/FBbi_00000248 polarization microscopy http://purl.obolibrary.org/obo/FBbi_00000252 single-spot confocal microscopy http://purl.obolibrary.org/obo/FBbi_00000251 confocal microscopy http://purl.obolibrary.org/obo/FBbi_00000253 spinning disk confocal microscopy http://purl.obolibrary.org/obo/FBbi_00000251 confocal microscopy http://purl.obolibrary.org/obo/FBbi_00000254 two-photon laser scanning microscopy http://purl.obolibrary.org/obo/FBbi_00000255 multi-photon microscopy http://purl.obolibrary.org/obo/FBbi_00000258 transmission electron microscopy http://purl.obolibrary.org/obo/FBbi_00000256 electron microscopy http://purl.obolibrary.org/obo/FBbi_00000380 scanning-transmission electron microscopy http://purl.obolibrary.org/obo/FBbi_00000256 electron microscopy http://purl.obolibrary.org/obo/FBbi_00000381 EELS imaging http://purl.obolibrary.org/obo/FBbi_00000256 electron microscopy http://purl.obolibrary.org/obo/FBbi_00000382 EDAX imaging http://purl.obolibrary.org/obo/FBbi_00000256 electron microscopy http://purl.obolibrary.org/obo/FBbi_00000622 high-voltage electron microscopy (HVEM) http://purl.obolibrary.org/obo/FBbi_00000258 transmission electron microscopy http://purl.obolibrary.org/obo/FBbi_00000623 intermediate voltage electron microscopy (IVEM) http://purl.obolibrary.org/obo/FBbi_00000258 transmission electron microscopy http://purl.obolibrary.org/obo/FBbi_00000033 diagram http://purl.obolibrary.org/obo/FBbi_00000266 portrayed image http://purl.obolibrary.org/obo/FBbi_00000223 graphic illustration http://purl.obolibrary.org/obo/FBbi_00000266 portrayed image http://purl.obolibrary.org/obo/FBbi_00000261 montage http://purl.obolibrary.org/obo/FBbi_00000266 portrayed image http://purl.obolibrary.org/obo/FBbi_00000272 illumination by photons http://purl.obolibrary.org/obo/FBbi_00000268 illumination method http://purl.obolibrary.org/obo/FBbi_00000273 illumination by electrons http://purl.obolibrary.org/obo/FBbi_00000268 illumination method http://purl.obolibrary.org/obo/FBbi_00000274 illumination by acoustic waves http://purl.obolibrary.org/obo/FBbi_00000268 illumination method http://purl.obolibrary.org/obo/FBbi_00000275 illumination by neutrons http://purl.obolibrary.org/obo/FBbi_00000268 illumination method http://purl.obolibrary.org/obo/FBbi_00000276 illumination by ions http://purl.obolibrary.org/obo/FBbi_00000268 illumination method http://purl.obolibrary.org/obo/FBbi_00000279 coherent illumination http://purl.obolibrary.org/obo/FBbi_00000268 illumination method http://purl.obolibrary.org/obo/FBbi_00000280 incoherent illumination http://purl.obolibrary.org/obo/FBbi_00000268 illumination method http://purl.obolibrary.org/obo/FBbi_00000281 nearfield illumination http://purl.obolibrary.org/obo/FBbi_00000268 illumination method http://purl.obolibrary.org/obo/FBbi_00000282 farfield illumination http://purl.obolibrary.org/obo/FBbi_00000268 illumination method http://purl.obolibrary.org/obo/FBbi_00000283 continuous illumination http://purl.obolibrary.org/obo/FBbi_00000268 illumination method http://purl.obolibrary.org/obo/FBbi_00000285 oblique illumination http://purl.obolibrary.org/obo/FBbi_00000268 illumination method http://purl.obolibrary.org/obo/FBbi_00000306 wide-field detection http://purl.obolibrary.org/obo/FBbi_00000269 detection method http://purl.obolibrary.org/obo/FBbi_00000307 narrow-field detection http://purl.obolibrary.org/obo/FBbi_00000269 detection method http://purl.obolibrary.org/obo/FBbi_00000374 detection of photons http://purl.obolibrary.org/obo/FBbi_00000269 detection method http://purl.obolibrary.org/obo/FBbi_00000375 detection of electrons http://purl.obolibrary.org/obo/FBbi_00000269 detection method http://purl.obolibrary.org/obo/FBbi_00000376 detection of acoustic waves http://purl.obolibrary.org/obo/FBbi_00000269 detection method http://purl.obolibrary.org/obo/FBbi_00000377 detection of current induced in the specimen http://purl.obolibrary.org/obo/FBbi_00000269 detection method http://purl.obolibrary.org/obo/FBbi_00000394 spot detector http://purl.obolibrary.org/obo/FBbi_00000269 detection method http://purl.obolibrary.org/obo/FBbi_00000395 area detector http://purl.obolibrary.org/obo/FBbi_00000269 detection method http://purl.obolibrary.org/obo/FBbi_00000308 absorption of illumination http://purl.obolibrary.org/obo/FBbi_00000270 imaged parameter http://purl.obolibrary.org/obo/FBbi_00000310 elastic scattering http://purl.obolibrary.org/obo/FBbi_00000270 imaged parameter http://purl.obolibrary.org/obo/FBbi_00000311 refractive index http://purl.obolibrary.org/obo/FBbi_00000270 imaged parameter http://purl.obolibrary.org/obo/FBbi_00000312 optical path length gradient http://purl.obolibrary.org/obo/FBbi_00000270 imaged parameter http://purl.obolibrary.org/obo/FBbi_00000313 retardance http://purl.obolibrary.org/obo/FBbi_00000270 imaged parameter http://purl.obolibrary.org/obo/FBbi_00000314 stiffness http://purl.obolibrary.org/obo/FBbi_00000270 imaged parameter http://purl.obolibrary.org/obo/FBbi_00000315 electron density http://purl.obolibrary.org/obo/FBbi_00000270 imaged parameter http://purl.obolibrary.org/obo/FBbi_00000316 fluorescence emission http://purl.obolibrary.org/obo/FBbi_00000270 imaged parameter http://purl.obolibrary.org/obo/FBbi_00000319 chemical composition http://purl.obolibrary.org/obo/FBbi_00000270 imaged parameter http://purl.obolibrary.org/obo/FBbi_00000320 elevation http://purl.obolibrary.org/obo/FBbi_00000270 imaged parameter http://purl.obolibrary.org/obo/FBbi_00000322 optical method http://purl.obolibrary.org/obo/FBbi_00000271 contrast-enhancing method http://purl.obolibrary.org/obo/FBbi_00000323 computational method http://purl.obolibrary.org/obo/FBbi_00000271 contrast-enhancing method http://purl.obolibrary.org/obo/FBbi_00001006 x-ray/gamma ray illumination http://purl.obolibrary.org/obo/FBbi_00000272 illumination by photons http://purl.obolibrary.org/obo/FBbi_00000341 UV/visible/IR illumination http://purl.obolibrary.org/obo/FBbi_00000272 illumination by photons http://purl.obolibrary.org/obo/FBbi_00000588 inelastic scattering of electrons http://purl.obolibrary.org/obo/FBbi_00000309 inelastic scattering http://purl.obolibrary.org/obo/FBbi_00000586 elastic scattering of electrons http://purl.obolibrary.org/obo/FBbi_00000310 elastic scattering http://purl.obolibrary.org/obo/FBbi_00000587 elastic scattering of photons http://purl.obolibrary.org/obo/FBbi_00000310 elastic scattering http://purl.obolibrary.org/obo/FBbi_00000317 sub-nanosecond time-resolved fluorescence emission) http://purl.obolibrary.org/obo/FBbi_00000316 fluorescence emission http://purl.obolibrary.org/obo/FBbi_00000318 fluorescence polarization (polarization angle resolved fluorescence emission) http://purl.obolibrary.org/obo/FBbi_00000316 fluorescence emission http://purl.obolibrary.org/obo/FBbi_00000608 X-ray fluorescence http://purl.obolibrary.org/obo/FBbi_00000316 fluorescence emission http://purl.obolibrary.org/obo/FBbi_00000332 structured illumination microscopy (SIM) http://purl.obolibrary.org/obo/FBbi_00000321 resolution-enhancing method http://purl.obolibrary.org/obo/FBbi_00000333 point-localization method http://purl.obolibrary.org/obo/FBbi_00000321 resolution-enhancing method http://purl.obolibrary.org/obo/FBbi_00000334 stimulated emission depletion (STED) http://purl.obolibrary.org/obo/FBbi_00000321 resolution-enhancing method http://purl.obolibrary.org/obo/FBbi_00000618 ground state depletion scanning (GSD) http://purl.obolibrary.org/obo/FBbi_00000321 resolution-enhancing method http://purl.obolibrary.org/obo/FBbi_00000325 defocus phase contrast http://purl.obolibrary.org/obo/FBbi_00000322 optical method http://purl.obolibrary.org/obo/FBbi_00000329 interference reflection contrast (IRM) http://purl.obolibrary.org/obo/FBbi_00000322 optical method http://purl.obolibrary.org/obo/FBbi_00000330 interference contrast http://purl.obolibrary.org/obo/FBbi_00000322 optical method http://purl.obolibrary.org/obo/FBbi_00000331 polarization contrast http://purl.obolibrary.org/obo/FBbi_00000322 optical method http://purl.obolibrary.org/obo/FBbi_00000335 PALM (photoactivation localization microscopy) http://purl.obolibrary.org/obo/FBbi_00000333 point-localization method http://purl.obolibrary.org/obo/FBbi_00000336 STORM (stochastic optical reconstruction microscopy) http://purl.obolibrary.org/obo/FBbi_00000333 point-localization method http://purl.obolibrary.org/obo/FBbi_00000337 FIONA (fluorescence imaging with one nanometer accuracy) http://purl.obolibrary.org/obo/FBbi_00000333 point-localization method http://purl.obolibrary.org/obo/FBbi_00000338 DOPI (defocussed orientation and position imaging) http://purl.obolibrary.org/obo/FBbi_00000333 point-localization method http://purl.obolibrary.org/obo/FBbi_00000339 PAINT (point accumulation for imaging in nanoscale topography) http://purl.obolibrary.org/obo/FBbi_00000333 point-localization method http://purl.obolibrary.org/obo/FBbi_00000256 electron microscopy http://purl.obolibrary.org/obo/FBbi_00000343 microscopy with lenses http://purl.obolibrary.org/obo/FBbi_00000345 light microscopy http://purl.obolibrary.org/obo/FBbi_00000343 microscopy with lenses http://purl.obolibrary.org/obo/FBbi_00000347 scanning tunneling microscopy http://purl.obolibrary.org/obo/FBbi_00000344 scanning probe microscopy http://purl.obolibrary.org/obo/FBbi_00000348 nearfield scanning optical microscopy (ANSOM) http://purl.obolibrary.org/obo/FBbi_00000344 scanning probe microscopy http://purl.obolibrary.org/obo/FBbi_00000243 bright-field microscopy http://purl.obolibrary.org/obo/FBbi_00000345 light microscopy http://purl.obolibrary.org/obo/FBbi_00000245 differential interference contrast microscopy http://purl.obolibrary.org/obo/FBbi_00000345 light microscopy http://purl.obolibrary.org/obo/FBbi_00000246 fluorescence microscopy http://purl.obolibrary.org/obo/FBbi_00000345 light microscopy http://purl.obolibrary.org/obo/FBbi_00000247 phase contrast microscopy http://purl.obolibrary.org/obo/FBbi_00000345 light microscopy http://purl.obolibrary.org/obo/FBbi_00000249 time lapse microscopy http://purl.obolibrary.org/obo/FBbi_00000345 light microscopy http://purl.obolibrary.org/obo/FBbi_00000324 in-focus phase contrast http://purl.obolibrary.org/obo/FBbi_00000353 modified objective lens http://purl.obolibrary.org/obo/FBbi_00000327 Hoffman modulation http://purl.obolibrary.org/obo/FBbi_00000353 modified objective lens http://purl.obolibrary.org/obo/FBbi_00000328 single sideband edge enhancement (SSBE) http://purl.obolibrary.org/obo/FBbi_00000353 modified objective lens http://purl.obolibrary.org/obo/FBbi_00000356 Wiener filter http://purl.obolibrary.org/obo/FBbi_00000354 linear method http://purl.obolibrary.org/obo/FBbi_00000357 3D-deconvolution http://purl.obolibrary.org/obo/FBbi_00000354 linear method http://purl.obolibrary.org/obo/FBbi_00000358 no-neighbors deblurring http://purl.obolibrary.org/obo/FBbi_00000355 non-linear method http://purl.obolibrary.org/obo/FBbi_00000359 nearest-neighbors deblurring http://purl.obolibrary.org/obo/FBbi_00000355 non-linear method http://purl.obolibrary.org/obo/FBbi_00000360 constrained iterative deconvolution http://purl.obolibrary.org/obo/FBbi_00000357 3D-deconvolution http://purl.obolibrary.org/obo/FBbi_00000361 maximum likelihood deconvolution http://purl.obolibrary.org/obo/FBbi_00000357 3D-deconvolution http://purl.obolibrary.org/obo/FBbi_00000362 blind deconvolution http://purl.obolibrary.org/obo/FBbi_00000357 3D-deconvolution http://purl.obolibrary.org/obo/FBbi_00000363 exhaustive photon reassignment http://purl.obolibrary.org/obo/FBbi_00000357 3D-deconvolution http://purl.obolibrary.org/obo/FBbi_00000378 detection of UV/visible/IR photons http://purl.obolibrary.org/obo/FBbi_00000374 detection of photons http://purl.obolibrary.org/obo/FBbi_00000379 detection of X-ray photons http://purl.obolibrary.org/obo/FBbi_00000374 detection of photons http://purl.obolibrary.org/obo/FBbi_00000384 photo-bleaching illumination http://purl.obolibrary.org/obo/FBbi_00000383 specimen_modifying_illumination http://purl.obolibrary.org/obo/FBbi_00000385 photo-ablation illumination http://purl.obolibrary.org/obo/FBbi_00000383 specimen_modifying_illumination http://purl.obolibrary.org/obo/FBbi_00000386 photo-switching illumination http://purl.obolibrary.org/obo/FBbi_00000383 specimen_modifying_illumination http://purl.obolibrary.org/obo/FBbi_00000387 photo-activation illumination http://purl.obolibrary.org/obo/FBbi_00000383 specimen_modifying_illumination http://purl.obolibrary.org/obo/FBbi_00000388 uncaging illumination http://purl.obolibrary.org/obo/FBbi_00000383 specimen_modifying_illumination http://purl.obolibrary.org/obo/FBbi_00000389 trapping illumination http://purl.obolibrary.org/obo/FBbi_00000383 specimen_modifying_illumination http://purl.obolibrary.org/obo/FBbi_00000390 emission-depletion illumination http://purl.obolibrary.org/obo/FBbi_00000383 specimen_modifying_illumination http://purl.obolibrary.org/obo/FBbi_00000295 photomultiplier tube (PMT) http://purl.obolibrary.org/obo/FBbi_00000394 spot detector http://purl.obolibrary.org/obo/FBbi_00000296 photodiode http://purl.obolibrary.org/obo/FBbi_00000394 spot detector http://purl.obolibrary.org/obo/FBbi_00000297 avalanche photodiode (APD) http://purl.obolibrary.org/obo/FBbi_00000394 spot detector http://purl.obolibrary.org/obo/FBbi_00000305 piezo-electric device http://purl.obolibrary.org/obo/FBbi_00000394 spot detector http://purl.obolibrary.org/obo/FBbi_00000294 charge coupled device (CCD) http://purl.obolibrary.org/obo/FBbi_00000395 area detector http://purl.obolibrary.org/obo/FBbi_00000298 silicon intensified target tube (SIT) http://purl.obolibrary.org/obo/FBbi_00000395 area detector http://purl.obolibrary.org/obo/FBbi_00000299 intensified SIT (ISIT) http://purl.obolibrary.org/obo/FBbi_00000395 area detector http://purl.obolibrary.org/obo/FBbi_00000300 intensified CCD (ICCD) http://purl.obolibrary.org/obo/FBbi_00000395 area detector http://purl.obolibrary.org/obo/FBbi_00000301 electron multiplying CCD (EMCCD) http://purl.obolibrary.org/obo/FBbi_00000395 area detector http://purl.obolibrary.org/obo/FBbi_00000302 electron bombardment CCD (EBCCD) http://purl.obolibrary.org/obo/FBbi_00000395 area detector http://purl.obolibrary.org/obo/FBbi_00000303 film http://purl.obolibrary.org/obo/FBbi_00000395 area detector http://purl.obolibrary.org/obo/FBbi_00000304 complementary metal oxide semiconductor (CMOS) http://purl.obolibrary.org/obo/FBbi_00000395 area detector http://purl.obolibrary.org/obo/FBbi_00000613 vidicon tube camera http://purl.obolibrary.org/obo/FBbi_00000395 area detector http://purl.obolibrary.org/obo/FBbi_00000122 metabolically incorporated radioisotope http://purl.obolibrary.org/obo/FBbi_00000397 visualization by chemical attribute http://purl.obolibrary.org/obo/FBbi_00000403 small-molecule probe http://purl.obolibrary.org/obo/FBbi_00000397 visualization by chemical attribute http://purl.obolibrary.org/obo/FBbi_00000410 macromolecular probe http://purl.obolibrary.org/obo/FBbi_00000397 visualization by chemical attribute http://purl.obolibrary.org/obo/FBbi_00000573 uranium compound http://purl.obolibrary.org/obo/FBbi_00000399 negative staining http://purl.obolibrary.org/obo/FBbi_00000574 molybdenum compound http://purl.obolibrary.org/obo/FBbi_00000399 negative staining http://purl.obolibrary.org/obo/FBbi_00000575 tungsten compound http://purl.obolibrary.org/obo/FBbi_00000399 negative staining http://purl.obolibrary.org/obo/FBbi_00000576 aurothioglucose http://purl.obolibrary.org/obo/FBbi_00000399 negative staining http://purl.obolibrary.org/obo/FBbi_00000577 other negative stain http://purl.obolibrary.org/obo/FBbi_00000399 negative staining http://purl.obolibrary.org/obo/FBbi_00000204 DNA probe http://purl.obolibrary.org/obo/FBbi_00000400 sequence-specific nucleic acid probe http://purl.obolibrary.org/obo/FBbi_00000215 RNA probe http://purl.obolibrary.org/obo/FBbi_00000400 sequence-specific nucleic acid probe http://purl.obolibrary.org/obo/FBbi_00000432 peptide-nucleic acid probe http://purl.obolibrary.org/obo/FBbi_00000400 sequence-specific nucleic acid probe http://purl.obolibrary.org/obo/FBbi_00000130 labeled primary antibody http://purl.obolibrary.org/obo/FBbi_00000401 antibody http://purl.obolibrary.org/obo/FBbi_00000156 primary antibody plus labeled secondary antibody http://purl.obolibrary.org/obo/FBbi_00000401 antibody http://purl.obolibrary.org/obo/FBbi_00000425 conconavalin A http://purl.obolibrary.org/obo/FBbi_00000402 lectin http://purl.obolibrary.org/obo/FBbi_00000426 wheat germ agglutinin http://purl.obolibrary.org/obo/FBbi_00000402 lectin http://purl.obolibrary.org/obo/FBbi_00000427 Phaseolus vulgaris lectin PHA-L) http://purl.obolibrary.org/obo/FBbi_00000402 lectin http://purl.obolibrary.org/obo/FBbi_00000428 Arachis hypogaea (PNA) http://purl.obolibrary.org/obo/FBbi_00000402 lectin http://purl.obolibrary.org/obo/FBbi_00000429 Helix pomatia agglutinin http://purl.obolibrary.org/obo/FBbi_00000402 lectin http://purl.obolibrary.org/obo/FBbi_00000430 soybean agglutinin http://purl.obolibrary.org/obo/FBbi_00000402 lectin http://purl.obolibrary.org/obo/FBbi_00000431 cholera toxin B http://purl.obolibrary.org/obo/FBbi_00000402 lectin http://purl.obolibrary.org/obo/FBbi_00000112 probe for lipid http://purl.obolibrary.org/obo/FBbi_00000403 small-molecule probe http://purl.obolibrary.org/obo/FBbi_00000406 probes for nucleic acid http://purl.obolibrary.org/obo/FBbi_00000403 small-molecule probe http://purl.obolibrary.org/obo/FBbi_00000408 probe for protein http://purl.obolibrary.org/obo/FBbi_00000403 small-molecule probe http://purl.obolibrary.org/obo/FBbi_00000409 organelle-specific probe http://purl.obolibrary.org/obo/FBbi_00000403 small-molecule probe http://purl.obolibrary.org/obo/FBbi_00000415 stain with broad specificity http://purl.obolibrary.org/obo/FBbi_00000403 small-molecule probe http://purl.obolibrary.org/obo/FBbi_00000420 fluorescent protein derived from Aequorea http://purl.obolibrary.org/obo/FBbi_00000405 fluorescent protein tag http://purl.obolibrary.org/obo/FBbi_00000433 fluorescent protein derived from Anthozoa http://purl.obolibrary.org/obo/FBbi_00000405 fluorescent protein tag http://purl.obolibrary.org/obo/FBbi_00000434 optical highlighter http://purl.obolibrary.org/obo/FBbi_00000405 fluorescent protein tag http://purl.obolibrary.org/obo/FBbi_00000612 fluorescent protein derived from Arabidopsis http://purl.obolibrary.org/obo/FBbi_00000405 fluorescent protein tag http://purl.obolibrary.org/obo/FBbi_00000421 membrane-permeant probe http://purl.obolibrary.org/obo/FBbi_00000406 probes for nucleic acid http://purl.obolibrary.org/obo/FBbi_00000422 membrane impermeant probe http://purl.obolibrary.org/obo/FBbi_00000406 probes for nucleic acid http://purl.obolibrary.org/obo/FBbi_00000034 HA peptide tag http://purl.obolibrary.org/obo/FBbi_00000407 small genetically encoded tag http://purl.obolibrary.org/obo/FBbi_00000086 c-MYC peptide tag http://purl.obolibrary.org/obo/FBbi_00000407 small genetically encoded tag http://purl.obolibrary.org/obo/FBbi_00000087 FLAG peptide tag http://purl.obolibrary.org/obo/FBbi_00000407 small genetically encoded tag http://purl.obolibrary.org/obo/FBbi_00000416 tetracysteine tag http://purl.obolibrary.org/obo/FBbi_00000407 small genetically encoded tag http://purl.obolibrary.org/obo/FBbi_00000418 genetically encoded biotin tag http://purl.obolibrary.org/obo/FBbi_00000407 small genetically encoded tag http://purl.obolibrary.org/obo/FBbi_00000459 affinity for specific proteins http://purl.obolibrary.org/obo/FBbi_00000408 probe for protein http://purl.obolibrary.org/obo/FBbi_00000460 non-specific protein affinity http://purl.obolibrary.org/obo/FBbi_00000408 probe for protein http://purl.obolibrary.org/obo/FBbi_00000411 probe for mitochondria http://purl.obolibrary.org/obo/FBbi_00000409 organelle-specific probe http://purl.obolibrary.org/obo/FBbi_00000412 probe for endoplasmic reticulum http://purl.obolibrary.org/obo/FBbi_00000409 organelle-specific probe http://purl.obolibrary.org/obo/FBbi_00000413 probe for Golgi http://purl.obolibrary.org/obo/FBbi_00000409 organelle-specific probe http://purl.obolibrary.org/obo/FBbi_00000414 probe for lysosomes http://purl.obolibrary.org/obo/FBbi_00000409 organelle-specific probe http://purl.obolibrary.org/obo/FBbi_00000079 genetically encoded tag http://purl.obolibrary.org/obo/FBbi_00000410 macromolecular probe http://purl.obolibrary.org/obo/FBbi_00000400 sequence-specific nucleic acid probe http://purl.obolibrary.org/obo/FBbi_00000410 macromolecular probe http://purl.obolibrary.org/obo/FBbi_00000401 antibody http://purl.obolibrary.org/obo/FBbi_00000410 macromolecular probe http://purl.obolibrary.org/obo/FBbi_00000402 lectin http://purl.obolibrary.org/obo/FBbi_00000410 macromolecular probe http://purl.obolibrary.org/obo/FBbi_00000463 non-immunological protein probe http://purl.obolibrary.org/obo/FBbi_00000410 macromolecular probe http://purl.obolibrary.org/obo/FBbi_00000054 CMX rosamine (Mitotracker Red) http://purl.obolibrary.org/obo/FBbi_00000411 probe for mitochondria http://purl.obolibrary.org/obo/FBbi_00000062 rhodamine 123 http://purl.obolibrary.org/obo/FBbi_00000411 probe for mitochondria http://purl.obolibrary.org/obo/FBbi_00000567 optically-dense stain http://purl.obolibrary.org/obo/FBbi_00000415 stain with broad specificity http://purl.obolibrary.org/obo/FBbi_00000568 electron-dense stain http://purl.obolibrary.org/obo/FBbi_00000415 stain with broad specificity http://purl.obolibrary.org/obo/FBbi_00000051 acridine orange http://purl.obolibrary.org/obo/FBbi_00000421 membrane-permeant probe http://purl.obolibrary.org/obo/FBbi_00000052 Hoechst 33342 http://purl.obolibrary.org/obo/FBbi_00000421 membrane-permeant probe http://purl.obolibrary.org/obo/FBbi_00000061 pyronine http://purl.obolibrary.org/obo/FBbi_00000421 membrane-permeant probe http://purl.obolibrary.org/obo/FBbi_00000064 SYTO Blue http://purl.obolibrary.org/obo/FBbi_00000421 membrane-permeant probe http://purl.obolibrary.org/obo/FBbi_00000065 SYTO Green http://purl.obolibrary.org/obo/FBbi_00000421 membrane-permeant probe http://purl.obolibrary.org/obo/FBbi_00000066 SYTO Orange http://purl.obolibrary.org/obo/FBbi_00000421 membrane-permeant probe http://purl.obolibrary.org/obo/FBbi_00000067 SYTO Red http://purl.obolibrary.org/obo/FBbi_00000421 membrane-permeant probe http://purl.obolibrary.org/obo/FBbi_00000417 Hoechst 33258 http://purl.obolibrary.org/obo/FBbi_00000421 membrane-permeant probe http://purl.obolibrary.org/obo/FBbi_00000038 ethidium bromide http://purl.obolibrary.org/obo/FBbi_00000422 membrane impermeant probe http://purl.obolibrary.org/obo/FBbi_00000042 methyl green http://purl.obolibrary.org/obo/FBbi_00000422 membrane impermeant probe http://purl.obolibrary.org/obo/FBbi_00000047 propidium iodide http://purl.obolibrary.org/obo/FBbi_00000422 membrane impermeant probe http://purl.obolibrary.org/obo/FBbi_00000048 SYTOX Green http://purl.obolibrary.org/obo/FBbi_00000422 membrane impermeant probe http://purl.obolibrary.org/obo/FBbi_00000056 4',6-diamidino-2-phenylindole (DAPI) http://purl.obolibrary.org/obo/FBbi_00000422 membrane impermeant probe http://purl.obolibrary.org/obo/FBbi_00000068 YO-PRO-1 http://purl.obolibrary.org/obo/FBbi_00000422 membrane impermeant probe http://purl.obolibrary.org/obo/FBbi_00000423 acridine homodimer http://purl.obolibrary.org/obo/FBbi_00000422 membrane impermeant probe http://purl.obolibrary.org/obo/FBbi_00000424 7-amino-actinomycin D http://purl.obolibrary.org/obo/FBbi_00000422 membrane impermeant probe http://purl.obolibrary.org/obo/FBbi_00000535 fluorescent protein timer http://purl.obolibrary.org/obo/FBbi_00000434 optical highlighter http://purl.obolibrary.org/obo/FBbi_00000536 photoactivatable fluorescent protein http://purl.obolibrary.org/obo/FBbi_00000434 optical highlighter http://purl.obolibrary.org/obo/FBbi_00000537 photoconvertible fluorescent protein http://purl.obolibrary.org/obo/FBbi_00000434 optical highlighter http://purl.obolibrary.org/obo/FBbi_00000538 photoconvertible/photoswitchable fluorescent protein http://purl.obolibrary.org/obo/FBbi_00000434 optical highlighter http://purl.obolibrary.org/obo/FBbi_00000539 photoswitchable fluorescent protein http://purl.obolibrary.org/obo/FBbi_00000434 optical highlighter http://purl.obolibrary.org/obo/FBbi_00000080 EBFP http://purl.obolibrary.org/obo/FBbi_00000435 blue fluorescent protein from Aequorea http://purl.obolibrary.org/obo/FBbi_00000461 AzuriteFP http://purl.obolibrary.org/obo/FBbi_00000435 blue fluorescent protein from Aequorea http://purl.obolibrary.org/obo/FBbi_00000462 SiriusFP http://purl.obolibrary.org/obo/FBbi_00000435 blue fluorescent protein from Aequorea http://purl.obolibrary.org/obo/FBbi_00000081 ECFP http://purl.obolibrary.org/obo/FBbi_00000436 cyan fluorescent protein from Aequorea http://purl.obolibrary.org/obo/FBbi_00000468 CeruleanFP http://purl.obolibrary.org/obo/FBbi_00000436 cyan fluorescent protein from Aequorea http://purl.obolibrary.org/obo/FBbi_00000469 CyPet http://purl.obolibrary.org/obo/FBbi_00000436 cyan fluorescent protein from Aequorea http://purl.obolibrary.org/obo/FBbi_00000470 SCFP http://purl.obolibrary.org/obo/FBbi_00000436 cyan fluorescent protein from Aequorea http://purl.obolibrary.org/obo/FBbi_00000082 EGFP http://purl.obolibrary.org/obo/FBbi_00000437 green fluorescent protein from Aequorea http://purl.obolibrary.org/obo/FBbi_00000471 EmeraldFP http://purl.obolibrary.org/obo/FBbi_00000437 green fluorescent protein from Aequorea http://purl.obolibrary.org/obo/FBbi_00000472 SuperfolderFP http://purl.obolibrary.org/obo/FBbi_00000437 green fluorescent protein from Aequorea http://purl.obolibrary.org/obo/FBbi_00000473 T-SapphireFP http://purl.obolibrary.org/obo/FBbi_00000437 green fluorescent protein from Aequorea http://purl.obolibrary.org/obo/FBbi_00000084 EYFP http://purl.obolibrary.org/obo/FBbi_00000439 yellow fluorescent protein from Aequorea http://purl.obolibrary.org/obo/FBbi_00000474 CitrineFP http://purl.obolibrary.org/obo/FBbi_00000439 yellow fluorescent protein from Aequorea http://purl.obolibrary.org/obo/FBbi_00000475 SYFP http://purl.obolibrary.org/obo/FBbi_00000439 yellow fluorescent protein from Aequorea http://purl.obolibrary.org/obo/FBbi_00000476 TopazFP http://purl.obolibrary.org/obo/FBbi_00000439 yellow fluorescent protein from Aequorea http://purl.obolibrary.org/obo/FBbi_00000477 VenusFP http://purl.obolibrary.org/obo/FBbi_00000439 yellow fluorescent protein from Aequorea http://purl.obolibrary.org/obo/FBbi_00000478 yPet http://purl.obolibrary.org/obo/FBbi_00000439 yellow fluorescent protein from Aequorea http://purl.obolibrary.org/obo/FBbi_00000191 aminomethylcoumarin http://purl.obolibrary.org/obo/FBbi_00000455 fluorescent label http://purl.obolibrary.org/obo/FBbi_00000192 Cascade blue http://purl.obolibrary.org/obo/FBbi_00000455 fluorescent label http://purl.obolibrary.org/obo/FBbi_00000440 Alexa Fluor 488 http://purl.obolibrary.org/obo/FBbi_00000455 fluorescent label http://purl.obolibrary.org/obo/FBbi_00000441 Alexa Fluor 546 http://purl.obolibrary.org/obo/FBbi_00000455 fluorescent label http://purl.obolibrary.org/obo/FBbi_00000442 Alexa Fluor 568 http://purl.obolibrary.org/obo/FBbi_00000455 fluorescent label http://purl.obolibrary.org/obo/FBbi_00000443 Alexa Fluor 555 http://purl.obolibrary.org/obo/FBbi_00000455 fluorescent label http://purl.obolibrary.org/obo/FBbi_00000444 Alexa Fluor 594 http://purl.obolibrary.org/obo/FBbi_00000455 fluorescent label http://purl.obolibrary.org/obo/FBbi_00000445 Alexa Fluor 610 http://purl.obolibrary.org/obo/FBbi_00000455 fluorescent label http://purl.obolibrary.org/obo/FBbi_00000446 Alexa Fluor 633 http://purl.obolibrary.org/obo/FBbi_00000455 fluorescent label http://purl.obolibrary.org/obo/FBbi_00000447 Alexa Fluor 647 http://purl.obolibrary.org/obo/FBbi_00000455 fluorescent label http://purl.obolibrary.org/obo/FBbi_00000448 Cy2 http://purl.obolibrary.org/obo/FBbi_00000455 fluorescent label http://purl.obolibrary.org/obo/FBbi_00000449 Cy3 http://purl.obolibrary.org/obo/FBbi_00000455 fluorescent label http://purl.obolibrary.org/obo/FBbi_00000450 Cy5 http://purl.obolibrary.org/obo/FBbi_00000455 fluorescent label http://purl.obolibrary.org/obo/FBbi_00000451 Fluorescein (FITC) http://purl.obolibrary.org/obo/FBbi_00000455 fluorescent label http://purl.obolibrary.org/obo/FBbi_00000452 Rhodamine http://purl.obolibrary.org/obo/FBbi_00000455 fluorescent label http://purl.obolibrary.org/obo/FBbi_00000458 biotin http://purl.obolibrary.org/obo/FBbi_00000455 fluorescent label http://purl.obolibrary.org/obo/FBbi_00000132 alkaline phosphatase http://purl.obolibrary.org/obo/FBbi_00000456 enzyme label http://purl.obolibrary.org/obo/FBbi_00000138 horseradish peroxidase http://purl.obolibrary.org/obo/FBbi_00000456 enzyme label http://purl.obolibrary.org/obo/FBbi_00000158 acid phosphatase http://purl.obolibrary.org/obo/FBbi_00000456 enzyme label http://purl.obolibrary.org/obo/FBbi_00000176 esterase http://purl.obolibrary.org/obo/FBbi_00000456 enzyme label http://purl.obolibrary.org/obo/FBbi_00000178 glucose oxidase http://purl.obolibrary.org/obo/FBbi_00000456 enzyme label http://purl.obolibrary.org/obo/FBbi_00000202 gold http://purl.obolibrary.org/obo/FBbi_00000457 electron dense label http://purl.obolibrary.org/obo/FBbi_00000073 taxol http://purl.obolibrary.org/obo/FBbi_00000459 affinity for specific proteins http://purl.obolibrary.org/obo/FBbi_00000100 phalloidin http://purl.obolibrary.org/obo/FBbi_00000459 affinity for specific proteins http://purl.obolibrary.org/obo/FBbi_00000466 tetrodotoxin http://purl.obolibrary.org/obo/FBbi_00000459 affinity for specific proteins http://purl.obolibrary.org/obo/FBbi_00000467 batrachatoxin http://purl.obolibrary.org/obo/FBbi_00000459 affinity for specific proteins http://purl.obolibrary.org/obo/FBbi_00000046 orcein http://purl.obolibrary.org/obo/FBbi_00000460 non-specific protein affinity http://purl.obolibrary.org/obo/FBbi_00000464 alpha-bungarotoxin http://purl.obolibrary.org/obo/FBbi_00000463 non-immunological protein probe http://purl.obolibrary.org/obo/FBbi_00000465 botulinum toxin http://purl.obolibrary.org/obo/FBbi_00000463 non-immunological protein probe http://purl.obolibrary.org/obo/FBbi_00000486 mTagBFP http://purl.obolibrary.org/obo/FBbi_00000479 blue fluorescent proteins from Anthozoa http://purl.obolibrary.org/obo/FBbi_00000487 AmCyanFP http://purl.obolibrary.org/obo/FBbi_00000480 cyan fluorescent proteins from Anthozoa http://purl.obolibrary.org/obo/FBbi_00000488 mCyFP http://purl.obolibrary.org/obo/FBbi_00000480 cyan fluorescent proteins from Anthozoa http://purl.obolibrary.org/obo/FBbi_00000489 mTFP1 http://purl.obolibrary.org/obo/FBbi_00000480 cyan fluorescent proteins from Anthozoa http://purl.obolibrary.org/obo/FBbi_00000490 TagCFP http://purl.obolibrary.org/obo/FBbi_00000480 cyan fluorescent proteins from Anthozoa http://purl.obolibrary.org/obo/FBbi_00000499 AceFP http://purl.obolibrary.org/obo/FBbi_00000481 green fluorescent proteins from Anthozoa http://purl.obolibrary.org/obo/FBbi_00000500 Azami GreenFP http://purl.obolibrary.org/obo/FBbi_00000481 green fluorescent proteins from Anthozoa http://purl.obolibrary.org/obo/FBbi_00000501 CopGFP http://purl.obolibrary.org/obo/FBbi_00000481 green fluorescent proteins from Anthozoa http://purl.obolibrary.org/obo/FBbi_00000502 mWasabiFP http://purl.obolibrary.org/obo/FBbi_00000481 green fluorescent proteins from Anthozoa http://purl.obolibrary.org/obo/FBbi_00000503 TagGFP http://purl.obolibrary.org/obo/FBbi_00000481 green fluorescent proteins from Anthozoa http://purl.obolibrary.org/obo/FBbi_00000504 TagGFP2 http://purl.obolibrary.org/obo/FBbi_00000481 green fluorescent proteins from Anthozoa http://purl.obolibrary.org/obo/FBbi_00000505 ZsGreenFP http://purl.obolibrary.org/obo/FBbi_00000481 green fluorescent proteins from Anthozoa http://purl.obolibrary.org/obo/FBbi_00000085 DsRed http://purl.obolibrary.org/obo/FBbi_00000482 orange fluorescent proteins from Anthozoa http://purl.obolibrary.org/obo/FBbi_00000506 DsRed-ExpressFP http://purl.obolibrary.org/obo/FBbi_00000482 orange fluorescent proteins from Anthozoa http://purl.obolibrary.org/obo/FBbi_00000507 DsRed-Express2FP http://purl.obolibrary.org/obo/FBbi_00000482 orange fluorescent proteins from Anthozoa http://purl.obolibrary.org/obo/FBbi_00000508 DsRed-MaxFP http://purl.obolibrary.org/obo/FBbi_00000482 orange fluorescent proteins from Anthozoa http://purl.obolibrary.org/obo/FBbi_00000509 DsRed-monomerFP http://purl.obolibrary.org/obo/FBbi_00000482 orange fluorescent proteins from Anthozoa http://purl.obolibrary.org/obo/FBbi_00000510 DsRed2FP http://purl.obolibrary.org/obo/FBbi_00000482 orange fluorescent proteins from Anthozoa http://purl.obolibrary.org/obo/FBbi_00000511 dTomatoFP http://purl.obolibrary.org/obo/FBbi_00000482 orange fluorescent proteins from Anthozoa http://purl.obolibrary.org/obo/FBbi_00000512 Kusabira OrangeFP http://purl.obolibrary.org/obo/FBbi_00000482 orange fluorescent proteins from Anthozoa http://purl.obolibrary.org/obo/FBbi_00000513 Kusabira OrangeFP2 http://purl.obolibrary.org/obo/FBbi_00000482 orange fluorescent proteins from Anthozoa http://purl.obolibrary.org/obo/FBbi_00000514 mOrangeFP http://purl.obolibrary.org/obo/FBbi_00000482 orange fluorescent proteins from Anthozoa http://purl.obolibrary.org/obo/FBbi_00000515 mOrange2FP http://purl.obolibrary.org/obo/FBbi_00000482 orange fluorescent proteins from Anthozoa http://purl.obolibrary.org/obo/FBbi_00000516 TagRFP http://purl.obolibrary.org/obo/FBbi_00000482 orange fluorescent proteins from Anthozoa http://purl.obolibrary.org/obo/FBbi_00000517 TagRFP-T http://purl.obolibrary.org/obo/FBbi_00000482 orange fluorescent proteins from Anthozoa http://purl.obolibrary.org/obo/FBbi_00000518 tdTomatoFP http://purl.obolibrary.org/obo/FBbi_00000482 orange fluorescent proteins from Anthozoa http://purl.obolibrary.org/obo/FBbi_00000519 turboRFP http://purl.obolibrary.org/obo/FBbi_00000482 orange fluorescent proteins from Anthozoa http://purl.obolibrary.org/obo/FBbi_00000520 AsRed2FP http://purl.obolibrary.org/obo/FBbi_00000483 red fluorescent proteins from Anthozoa http://purl.obolibrary.org/obo/FBbi_00000521 eqFP611 http://purl.obolibrary.org/obo/FBbi_00000483 red fluorescent proteins from Anthozoa http://purl.obolibrary.org/obo/FBbi_00000522 HcRed1FP http://purl.obolibrary.org/obo/FBbi_00000483 red fluorescent proteins from Anthozoa http://purl.obolibrary.org/obo/FBbi_00000523 JRedFP http://purl.obolibrary.org/obo/FBbi_00000483 red fluorescent proteins from Anthozoa http://purl.obolibrary.org/obo/FBbi_00000524 mAppleFP http://purl.obolibrary.org/obo/FBbi_00000483 red fluorescent proteins from Anthozoa http://purl.obolibrary.org/obo/FBbi_00000525 mCherryFP http://purl.obolibrary.org/obo/FBbi_00000483 red fluorescent proteins from Anthozoa http://purl.obolibrary.org/obo/FBbi_00000526 mRasberryFP http://purl.obolibrary.org/obo/FBbi_00000483 red fluorescent proteins from Anthozoa http://purl.obolibrary.org/obo/FBbi_00000527 mRFP1 http://purl.obolibrary.org/obo/FBbi_00000483 red fluorescent proteins from Anthozoa http://purl.obolibrary.org/obo/FBbi_00000528 mRubyFP http://purl.obolibrary.org/obo/FBbi_00000483 red fluorescent proteins from Anthozoa http://purl.obolibrary.org/obo/FBbi_00000529 mStrawberryFP http://purl.obolibrary.org/obo/FBbi_00000483 red fluorescent proteins from Anthozoa http://purl.obolibrary.org/obo/FBbi_00000530 tdRFP611 http://purl.obolibrary.org/obo/FBbi_00000483 red fluorescent proteins from Anthozoa http://purl.obolibrary.org/obo/FBbi_00000491 AQ143 http://purl.obolibrary.org/obo/FBbi_00000484 far-red fluorescent proteins from Anthozoa http://purl.obolibrary.org/obo/FBbi_00000492 HcRed-tandemFP http://purl.obolibrary.org/obo/FBbi_00000484 far-red fluorescent proteins from Anthozoa http://purl.obolibrary.org/obo/FBbi_00000493 KatushkaFP http://purl.obolibrary.org/obo/FBbi_00000484 far-red fluorescent proteins from Anthozoa http://purl.obolibrary.org/obo/FBbi_00000494 mKateFP http://purl.obolibrary.org/obo/FBbi_00000484 far-red fluorescent proteins from Anthozoa http://purl.obolibrary.org/obo/FBbi_00000495 mKate2FP http://purl.obolibrary.org/obo/FBbi_00000484 far-red fluorescent proteins from Anthozoa http://purl.obolibrary.org/obo/FBbi_00000496 mPlumFP http://purl.obolibrary.org/obo/FBbi_00000484 far-red fluorescent proteins from Anthozoa http://purl.obolibrary.org/obo/FBbi_00000497 tdKatuskaFP http://purl.obolibrary.org/obo/FBbi_00000484 far-red fluorescent proteins from Anthozoa http://purl.obolibrary.org/obo/FBbi_00000498 tdRFP639 http://purl.obolibrary.org/obo/FBbi_00000484 far-red fluorescent proteins from Anthozoa http://purl.obolibrary.org/obo/FBbi_00000531 PhiYFP http://purl.obolibrary.org/obo/FBbi_00000485 yellow fluorescent proteins from Anthozoa http://purl.obolibrary.org/obo/FBbi_00000532 TagYFP http://purl.obolibrary.org/obo/FBbi_00000485 yellow fluorescent proteins from Anthozoa http://purl.obolibrary.org/obo/FBbi_00000533 TurboYFP http://purl.obolibrary.org/obo/FBbi_00000485 yellow fluorescent proteins from Anthozoa http://purl.obolibrary.org/obo/FBbi_00000534 ZsYellowFP http://purl.obolibrary.org/obo/FBbi_00000485 yellow fluorescent proteins from Anthozoa http://purl.obolibrary.org/obo/FBbi_00000546 PA-mCherry1FP http://purl.obolibrary.org/obo/FBbi_00000536 photoactivatable fluorescent protein http://purl.obolibrary.org/obo/FBbi_00000547 PA-mRFP http://purl.obolibrary.org/obo/FBbi_00000536 photoactivatable fluorescent protein http://purl.obolibrary.org/obo/FBbi_00000540 DsRed-ES FP http://purl.obolibrary.org/obo/FBbi_00000535 fluorescent protein timer http://purl.obolibrary.org/obo/FBbi_00000541 Fast-FT http://purl.obolibrary.org/obo/FBbi_00000535 fluorescent protein timer http://purl.obolibrary.org/obo/FBbi_00000542 Medium-FT http://purl.obolibrary.org/obo/FBbi_00000535 fluorescent protein timer http://purl.obolibrary.org/obo/FBbi_00000543 Slow-FT http://purl.obolibrary.org/obo/FBbi_00000535 fluorescent protein timer http://purl.obolibrary.org/obo/FBbi_00000548 Phamret http://purl.obolibrary.org/obo/FBbi_00000536 photoactivatable fluorescent protein http://purl.obolibrary.org/obo/FBbi_00000549 Dendra2FP http://purl.obolibrary.org/obo/FBbi_00000537 photoconvertible fluorescent protein http://purl.obolibrary.org/obo/FBbi_00000550 dEOSFP http://purl.obolibrary.org/obo/FBbi_00000537 photoconvertible fluorescent protein http://purl.obolibrary.org/obo/FBbi_00000551 KaedeFP http://purl.obolibrary.org/obo/FBbi_00000537 photoconvertible fluorescent protein http://purl.obolibrary.org/obo/FBbi_00000552 mEOS2FP http://purl.obolibrary.org/obo/FBbi_00000537 photoconvertible fluorescent protein http://purl.obolibrary.org/obo/FBbi_00000553 mKikGR http://purl.obolibrary.org/obo/FBbi_00000537 photoconvertible fluorescent protein http://purl.obolibrary.org/obo/FBbi_00000554 wtEOSFP http://purl.obolibrary.org/obo/FBbi_00000537 photoconvertible fluorescent protein http://purl.obolibrary.org/obo/FBbi_00000555 wtKIikGR http://purl.obolibrary.org/obo/FBbi_00000537 photoconvertible fluorescent protein http://purl.obolibrary.org/obo/FBbi_00000556 IrisFP http://purl.obolibrary.org/obo/FBbi_00000538 photoconvertible/photoswitchable fluorescent protein http://purl.obolibrary.org/obo/FBbi_00000557 bsDronpa http://purl.obolibrary.org/obo/FBbi_00000539 photoswitchable fluorescent protein http://purl.obolibrary.org/obo/FBbi_00000558 Dronpa http://purl.obolibrary.org/obo/FBbi_00000539 photoswitchable fluorescent protein http://purl.obolibrary.org/obo/FBbi_00000559 Dronpa-3 http://purl.obolibrary.org/obo/FBbi_00000539 photoswitchable fluorescent protein http://purl.obolibrary.org/obo/FBbi_00000561 KFP1 http://purl.obolibrary.org/obo/FBbi_00000539 photoswitchable fluorescent protein http://purl.obolibrary.org/obo/FBbi_00000562 mTFP0.7 http://purl.obolibrary.org/obo/FBbi_00000539 photoswitchable fluorescent protein http://purl.obolibrary.org/obo/FBbi_00000563 PadronFP http://purl.obolibrary.org/obo/FBbi_00000539 photoswitchable fluorescent protein http://purl.obolibrary.org/obo/FBbi_00000564 rsCherryFP http://purl.obolibrary.org/obo/FBbi_00000539 photoswitchable fluorescent protein http://purl.obolibrary.org/obo/FBbi_00000565 rsCherryRevFP http://purl.obolibrary.org/obo/FBbi_00000539 photoswitchable fluorescent protein http://purl.obolibrary.org/obo/FBbi_00000566 rsFastLimeFP http://purl.obolibrary.org/obo/FBbi_00000539 photoswitchable fluorescent protein http://purl.obolibrary.org/obo/FBbi_00000035 cresyl fast violet http://purl.obolibrary.org/obo/FBbi_00000567 optically-dense stain http://purl.obolibrary.org/obo/FBbi_00000039 fuchsin http://purl.obolibrary.org/obo/FBbi_00000567 optically-dense stain http://purl.obolibrary.org/obo/FBbi_00000040 giemsa http://purl.obolibrary.org/obo/FBbi_00000567 optically-dense stain http://purl.obolibrary.org/obo/FBbi_00000043 methyl violet http://purl.obolibrary.org/obo/FBbi_00000567 optically-dense stain http://purl.obolibrary.org/obo/FBbi_00000044 nitro blue tetrazolium chloride http://purl.obolibrary.org/obo/FBbi_00000567 optically-dense stain http://purl.obolibrary.org/obo/FBbi_00000045 nuclear fast red http://purl.obolibrary.org/obo/FBbi_00000567 optically-dense stain http://purl.obolibrary.org/obo/FBbi_00000049 toluidine blue http://purl.obolibrary.org/obo/FBbi_00000567 optically-dense stain http://purl.obolibrary.org/obo/FBbi_00000053 cationic colloidal gold http://purl.obolibrary.org/obo/FBbi_00000567 optically-dense stain http://purl.obolibrary.org/obo/FBbi_00000058 methylene blue http://purl.obolibrary.org/obo/FBbi_00000567 optically-dense stain http://purl.obolibrary.org/obo/FBbi_00000059 Nile blue A http://purl.obolibrary.org/obo/FBbi_00000567 optically-dense stain http://purl.obolibrary.org/obo/FBbi_00000063 rhodamine B http://purl.obolibrary.org/obo/FBbi_00000567 optically-dense stain http://purl.obolibrary.org/obo/FBbi_00000569 uranyl salt http://purl.obolibrary.org/obo/FBbi_00000568 electron-dense stain http://purl.obolibrary.org/obo/FBbi_00000570 lead salt http://purl.obolibrary.org/obo/FBbi_00000568 electron-dense stain http://purl.obolibrary.org/obo/FBbi_00000571 osmium tetroxide http://purl.obolibrary.org/obo/FBbi_00000568 electron-dense stain http://purl.obolibrary.org/obo/FBbi_00000572 potassium permanganate http://purl.obolibrary.org/obo/FBbi_00000568 electron-dense stain http://purl.obolibrary.org/obo/FBbi_00000610 copper salt http://purl.obolibrary.org/obo/FBbi_00000568 electron-dense stain http://purl.obolibrary.org/obo/FBbi_00000591 differences in chemical composition http://purl.obolibrary.org/obo/FBbi_00000590 source of contrast http://purl.obolibrary.org/obo/FBbi_00000592 distribution of epitope http://purl.obolibrary.org/obo/FBbi_00000590 source of contrast http://purl.obolibrary.org/obo/FBbi_00000596 distribution of a specific nucleic acid sequence http://purl.obolibrary.org/obo/FBbi_00000590 source of contrast http://purl.obolibrary.org/obo/FBbi_00000597 distribution of a specific protein http://purl.obolibrary.org/obo/FBbi_00000590 source of contrast http://purl.obolibrary.org/obo/FBbi_00000598 differences in adsorption or binding of stain http://purl.obolibrary.org/obo/FBbi_00000590 source of contrast http://purl.obolibrary.org/obo/FBbi_00000599 boundaries between regions with different refractive index http://purl.obolibrary.org/obo/FBbi_00000590 source of contrast http://purl.obolibrary.org/obo/FBbi_00000600 differences in amount of elastic light scattering http://purl.obolibrary.org/obo/FBbi_00000590 source of contrast http://purl.obolibrary.org/obo/FBbi_00000601 differences in deposition of metal shadow http://purl.obolibrary.org/obo/FBbi_00000590 source of contrast http://purl.obolibrary.org/obo/FBbi_00000602 differences in intrinsic optical density http://purl.obolibrary.org/obo/FBbi_00000590 source of contrast http://purl.obolibrary.org/obo/FBbi_00000604 compartmentalization of stain or label http://purl.obolibrary.org/obo/FBbi_00000590 source of contrast http://purl.obolibrary.org/obo/FBbi_00000605 differences in fluorescence lifetime http://purl.obolibrary.org/obo/FBbi_00000590 source of contrast http://purl.obolibrary.org/obo/FBbi_00000606 differences in orientation of fluorophore http://purl.obolibrary.org/obo/FBbi_00000590 source of contrast http://purl.obolibrary.org/obo/FBbi_00000607 intrinsic mass distribution http://purl.obolibrary.org/obo/FBbi_00000590 source of contrast http://purl.obolibrary.org/obo/FBbi_00000614 phototropin 2 http://purl.obolibrary.org/obo/FBbi_00000612 fluorescent protein derived from Arabidopsis http://purl.obolibrary.org/obo/FBbi_00000001 sample preparation method http://purl.obolibrary.org/obo/FBbi_root_00000000 method involved in biological imaging http://purl.obolibrary.org/obo/FBbi_00000031 visualization method http://purl.obolibrary.org/obo/FBbi_root_00000000 method involved in biological imaging http://purl.obolibrary.org/obo/FBbi_00000222 imaging method http://purl.obolibrary.org/obo/FBbi_root_00000000 method involved in biological imaging http://purl.obolibrary.org/obo/FBbi_00000271 contrast-enhancing method http://purl.obolibrary.org/obo/FBbi_root_00000000 method involved in biological imaging http://purl.obolibrary.org/obo/BFO_0000001 entity http://purl.obolibrary.org/obo/FBbi_00000000 obsolete dummy term http://purl.obolibrary.org/obo/FBbi_00000032 obsolete endogenous substrate, non-vital dye http://purl.obolibrary.org/obo/FBbi_00000036 obsolete endogenous substrate, diaminobenzidine http://purl.obolibrary.org/obo/FBbi_00000050 obsolete endogenous substrate, vital dye http://purl.obolibrary.org/obo/FBbi_00000069 obsolete endogenous substrate, dye conjugate http://purl.obolibrary.org/obo/FBbi_00000070 obsolete endogenous substrate, acidotropic-fluor conjugate http://purl.obolibrary.org/obo/FBbi_00000071 obsolete endogenous substrate, lectin-fluor conjugate http://purl.obolibrary.org/obo/FBbi_00000072 obsolete endogenous substrate, lectin-gold conjugate http://purl.obolibrary.org/obo/FBbi_00000074 obsolete endogenous substrate, phalloidin-fluor conjugate http://purl.obolibrary.org/obo/FBbi_00000075 obsolete exogenous label http://purl.obolibrary.org/obo/FBbi_00000083 obsolete Aequorea victoria red fluorescent protein tag http://purl.obolibrary.org/obo/FBbi_00000096 obsolete Alexa Fluor 488 actin fill http://purl.obolibrary.org/obo/FBbi_00000097 obsolete Alexa Fluor 568 actin fill http://purl.obolibrary.org/obo/FBbi_00000098 obsolete fluoresceine actin fill http://purl.obolibrary.org/obo/FBbi_00000099 obsolete rhodamine actin fill http://purl.obolibrary.org/obo/FBbi_00000101 obsolete Alexa Fluor 350 phalloidin fill http://purl.obolibrary.org/obo/FBbi_00000102 obsolete Alexa Fluor 488 phalloidin fill http://purl.obolibrary.org/obo/FBbi_00000103 obsolete eosin phalloidin fill http://purl.obolibrary.org/obo/FBbi_00000104 obsolete fluoresceine phalloidin fill http://purl.obolibrary.org/obo/FBbi_00000105 obsolete Oregon Green 488 phalloidin fill http://purl.obolibrary.org/obo/FBbi_00000106 obsolete Oregon Green 514 phalloidin fill http://purl.obolibrary.org/obo/FBbi_00000107 obsolete rhodamine phalloidin fill http://purl.obolibrary.org/obo/FBbi_00000108 obsolete Texas Red-X phalloidin fill http://purl.obolibrary.org/obo/FBbi_00000110 obsolete Oregon Green 514 tubulin fill http://purl.obolibrary.org/obo/FBbi_00000111 obsolete X-rhodamine tubulin fill http://purl.obolibrary.org/obo/FBbi_00000131 obsolete primary antibody-enzyme conjugate, substrate http://purl.obolibrary.org/obo/FBbi_00000133 obsolete primary antibody-alkaline phosphastase conjugate, DAB http://purl.obolibrary.org/obo/FBbi_00000134 obsolete primary antibody-alkaline phosphastase conjugate, ELF 97 phosphate http://purl.obolibrary.org/obo/FBbi_00000135 obsolete primary antibody-alkaline phosphastase conjugate, Vector Black http://purl.obolibrary.org/obo/FBbi_00000136 obsolete primary antibody-alkaline phosphastase conjugate, Vector Blue http://purl.obolibrary.org/obo/FBbi_00000137 obsolete primary antibody-alkaline phosphastase conjugate, Vector Red http://purl.obolibrary.org/obo/FBbi_00000139 obsolete primary antibody-horseradish peroxidase, 4-chloro-1-naphthol http://purl.obolibrary.org/obo/FBbi_00000140 obsolete primary antibody-horseradish peroxidase, 3-amino-9-ethylcarbazole http://purl.obolibrary.org/obo/FBbi_00000141 obsolete primary antibody-horseradish peroxidase, 3,3',5,5'-tetramethylbenzidine http://purl.obolibrary.org/obo/FBbi_00000142 obsolete primary antibody-horseradish peroxidase, Vector NovaRed http://purl.obolibrary.org/obo/FBbi_00000143 obsolete primary antibody-horseradish peroxidase, Vector SG http://purl.obolibrary.org/obo/FBbi_00000144 obsolete primary antibody-horseradish peroxidase, Vector VIP http://purl.obolibrary.org/obo/FBbi_00000145 obsolete primary antibody-fluor conjugate http://purl.obolibrary.org/obo/FBbi_00000146 obsolete primary antibody-aminomethylcoumarin acetate http://purl.obolibrary.org/obo/FBbi_00000147 obsolete primary antibody-Cascade blue http://purl.obolibrary.org/obo/FBbi_00000148 obsolete primary antibody-cyanine http://purl.obolibrary.org/obo/FBbi_00000149 obsolete primary antibody-fluorescein isothiocyanate http://purl.obolibrary.org/obo/FBbi_00000150 obsolete primary antibody-indocarbocyanine http://purl.obolibrary.org/obo/FBbi_00000151 obsolete primary antibody-indodicarbocyanine http://purl.obolibrary.org/obo/FBbi_00000152 obsolete primary antibody-rhodamine red-X http://purl.obolibrary.org/obo/FBbi_00000153 obsolete primary antibody-tetramethyl rhodamine isothiocyanate http://purl.obolibrary.org/obo/FBbi_00000154 obsolete primary antibody-Texas Red http://purl.obolibrary.org/obo/FBbi_00000155 obsolete primary antibody-gold conjugate http://purl.obolibrary.org/obo/FBbi_00000157 obsolete secondary antibody-enzyme conjugate, substrate http://purl.obolibrary.org/obo/FBbi_00000159 obsolete secondary antibody-alkaline phosphastase conjugate, DAB http://purl.obolibrary.org/obo/FBbi_00000160 obsolete secondary antibody-alkaline phosphastase conjugate, ELF 97 phosphate http://purl.obolibrary.org/obo/FBbi_00000161 obsolete secondary antibody-alkaline phosphastase conjugate, Fast Blue B http://purl.obolibrary.org/obo/FBbi_00000162 obsolete secondary antibody-alkaline phosphastase conjugate, Fast Red http://purl.obolibrary.org/obo/FBbi_00000163 obsolete secondary antibody-alkaline phosphastase conjugate, INT http://purl.obolibrary.org/obo/FBbi_00000164 obsolete secondary antibody-alkaline phosphastase conjugate, Magenta Phos http://purl.obolibrary.org/obo/FBbi_00000165 obsolete secondary antibody-alkaline phosphastase conjugate, NABP http://purl.obolibrary.org/obo/FBbi_00000166 obsolete secondary antibody-alkaline phosphastase conjugate, NAGP http://purl.obolibrary.org/obo/FBbi_00000167 obsolete secondary antibody-alkaline phosphastase conjugate, NAMP http://purl.obolibrary.org/obo/FBbi_00000168 obsolete secondary antibody-alkaline phosphastase conjugate, NATP http://purl.obolibrary.org/obo/FBbi_00000169 obsolete secondary antibody-alkaline phosphastase conjugate, NBT http://purl.obolibrary.org/obo/FBbi_00000170 obsolete secondary antibody-alkaline phosphastase conjugate, Vector Black http://purl.obolibrary.org/obo/FBbi_00000171 obsolete secondary antibody-alkaline phosphastase conjugate, Vector Blue http://purl.obolibrary.org/obo/FBbi_00000172 obsolete secondary antibody-alkaline phosphastase conjugate, Vector Red http://purl.obolibrary.org/obo/FBbi_00000173 obsolete secondary antibody-alkaline phosphastase conjugate, BCIP http://purl.obolibrary.org/obo/FBbi_00000174 obsolete secondary antibody-beta-galactosidase, X-Gal http://purl.obolibrary.org/obo/FBbi_00000175 obsolete secondary antibody-beta-glucuronidase, X-gluc http://purl.obolibrary.org/obo/FBbi_00000177 obsolete secondary antibody-esterase, Naphthol-AS-D-chloroacetate http://purl.obolibrary.org/obo/FBbi_00000179 obsolete secondary antibody-glucose oxidase, TNBT http://purl.obolibrary.org/obo/FBbi_00000180 obsolete secondary antibody-horseradish peroxidase, 3,3'-diaminobenzidine http://purl.obolibrary.org/obo/FBbi_00000181 obsolete secondary antibody-horseradish peroxidase, 3,3'-diaminobenzidine silver enhanced http://purl.obolibrary.org/obo/FBbi_00000182 obsolete secondary antibody-horseradish peroxidase, 4-chloro-1-naphthol http://purl.obolibrary.org/obo/FBbi_00000183 obsolete secondary antibody-horseradish peroxidase, 3-amino-9-ethylcarbazole http://purl.obolibrary.org/obo/FBbi_00000184 obsolete secondary antibody-horseradish peroxidase, 3,3',5,5'-tetramethylbenzidine http://purl.obolibrary.org/obo/FBbi_00000185 obsolete secondary antibody-horseradish peroxidase, Vector NovaRed http://purl.obolibrary.org/obo/FBbi_00000186 obsolete secondary antibody-horseradish peroxidase, Vector SG http://purl.obolibrary.org/obo/FBbi_00000187 obsolete secondary antibody-horseradish peroxidase, Vector VIP http://purl.obolibrary.org/obo/FBbi_00000188 obsolete secondary antibody-phosphatase, Naphthol-AS-BI-phosphate http://purl.obolibrary.org/obo/FBbi_00000189 obsolete secondary antibody-fluor conjugate http://purl.obolibrary.org/obo/FBbi_00000190 obsolete secondary antibody-Alexa Fluor conjugate http://purl.obolibrary.org/obo/FBbi_00000193 obsolete secondary antibody-cyanine conjugate http://purl.obolibrary.org/obo/FBbi_00000194 obsolete secondary antibody-diaminotriazinylaminoflorescein conjugate http://purl.obolibrary.org/obo/FBbi_00000195 obsolete secondary antibody-fluorescein isothiocyanate conjugate http://purl.obolibrary.org/obo/FBbi_00000196 obsolete secondary antibody-indocarbocyanine conjugate http://purl.obolibrary.org/obo/FBbi_00000197 obsolete secondary antibody-indodicarbocyanine conjugate http://purl.obolibrary.org/obo/FBbi_00000198 obsolete secondary antibody-lissamine rhodamine sulfonyl chloride http://purl.obolibrary.org/obo/FBbi_00000199 obsolete secondary antibody-rhodamine red-X conjugate http://purl.obolibrary.org/obo/FBbi_00000200 obsolete secondary antibody-tetramethyl rhodamine isothiocyanate conjugate http://purl.obolibrary.org/obo/FBbi_00000201 obsolete secondary antibody-Texas red conjugate http://purl.obolibrary.org/obo/FBbi_00000203 obsolete labeled nucleic acid probe http://purl.obolibrary.org/obo/FBbi_00000205 obsolete biotin labeled DNA probe http://purl.obolibrary.org/obo/FBbi_00000206 obsolete digoxigenin labeled DNA probe http://purl.obolibrary.org/obo/FBbi_00000207 obsolete fluor labeled DNA probe http://purl.obolibrary.org/obo/FBbi_00000208 obsolete BODIPY TR-14-dUTP labeled DNA probe http://purl.obolibrary.org/obo/FBbi_00000209 obsolete bromodeoxyuridine labeled DNA probe http://purl.obolibrary.org/obo/FBbi_00000210 obsolete fluoresceine-12-dUTP labeled DNA probe http://purl.obolibrary.org/obo/FBbi_00000211 obsolete Oregon Green 488-5-dUTP labeled DNA probe http://purl.obolibrary.org/obo/FBbi_00000212 obsolete radioisotope labeled DNA probe http://purl.obolibrary.org/obo/FBbi_00000213 obsolete [32]P labeled DNA probe http://purl.obolibrary.org/obo/FBbi_00000214 obsolete [33]P labeled DNA probe http://purl.obolibrary.org/obo/FBbi_00000216 obsolete biotin labeled RNA probe http://purl.obolibrary.org/obo/FBbi_00000217 obsolete digoxigenin labeled RNA probe http://purl.obolibrary.org/obo/FBbi_00000218 obsolete fluoroscein labeled RNA probe http://purl.obolibrary.org/obo/FBbi_00000219 obsolete radioisotope labeled RNA probe http://purl.obolibrary.org/obo/FBbi_00000220 obsolete [32]P labeled RNA probe http://purl.obolibrary.org/obo/FBbi_00000221 obsolete [33]P labeled RNA probe http://purl.obolibrary.org/obo/FBbi_00000242 obsolete wide field light micrograph http://purl.obolibrary.org/obo/FBbi_00000250 obsolete narrow field light micrograph http://purl.obolibrary.org/obo/FBbi_root_00000000 method involved in biological imaging http://purl.obolibrary.org/obo/RO_0002025 has effector activity http://purl.obolibrary.org/obo/RO_0002017 has component activity A 'has effector activity' B if A and B are GO molecular functions (GO_0003674), A 'has component activity' B and B is the effector (output function) of B. Each compound function has only one effector activity. http://purl.obolibrary.org/obo/RO_0002258 developmentally preceded by http://purl.obolibrary.org/obo/RO_0002324 developmentally related to Candidate definition: x developmentally related to y if and only if there exists some developmental process (GO:0032502) p such that x and y both participates in p, and x is the output of p and y is the input of p http://purl.obolibrary.org/obo/RO_0002286 developmentally succeeded by http://purl.obolibrary.org/obo/RO_0002384 has developmental potential involving Inverse of developmentally preceded by http://purl.obolibrary.org/obo/RO_0002384 has developmental potential involving http://purl.obolibrary.org/obo/RO_0002324 developmentally related to x has developmental potential involving y iff x is capable of a developmental process with output y. y may be the successor of x, or may be a different structure in the vicinity (as for example in the case of developmental induction). http://purl.obolibrary.org/obo/RO_0002388 has potential to directly develop into http://purl.obolibrary.org/obo/RO_0002387 has potential to develop into x has potential to directly develop into y iff x directly develops into y or x is capable of directly developing into y http://purl.obolibrary.org/obo/BFO_0000063 precedes http://purl.obolibrary.org/obo/RO_0002222 temporally related to x precedes y if and only if the time point at which x ends is before or equivalent to the time point at which y starts. Formally: x precedes y iff ω(x) <= α(y), where α is a function that maps a process to a start point, and ω is a function that maps a process to an end point. http://purl.obolibrary.org/obo/RO_0000052 characteristic of http://purl.obolibrary.org/obo/RO_0002314 characteristic of part of a relation between a specifically dependent continuant (the characteristic) and any other entity (the bearer), in which the characteristic depends on the bearer for its existence. http://purl.obolibrary.org/obo/RO_0000079 function of http://purl.obolibrary.org/obo/RO_0000052 characteristic of a relation between a function and an independent continuant (the bearer), in which the function specifically depends on the bearer for its existence http://purl.obolibrary.org/obo/RO_0000080 quality of http://purl.obolibrary.org/obo/RO_0000052 characteristic of a relation between a quality and an independent continuant (the bearer), in which the quality specifically depends on the bearer for its existence http://purl.obolibrary.org/obo/RO_0000085 has function http://purl.obolibrary.org/obo/RO_0000053 has characteristic a relation between an independent continuant (the bearer) and a function, in which the function specifically depends on the bearer for its existence http://purl.obolibrary.org/obo/RO_0000086 has quality http://purl.obolibrary.org/obo/RO_0000053 has characteristic a relation between an independent continuant (the bearer) and a quality, in which the quality specifically depends on the bearer for its existence http://purl.obolibrary.org/obo/RO_0002018 has component process http://purl.obolibrary.org/obo/RO_0002180 has component w 'has process component' p if p and w are processes, w 'has part' p and w is such that it can be directly disassembled into into n parts p, p2, p3, ..., pn, where these parts are of similar type. http://purl.obolibrary.org/obo/RO_0019000 regulates characteristic http://purl.obolibrary.org/obo/RO_0002410 causally related to A relationship that holds between a process and a characteristic in which process (P) regulates characteristic (C) iff: P results in the existence of C OR affects the intensity or magnitude of C. http://purl.obolibrary.org/obo/RO_0019001 positively regulates characteristic http://purl.obolibrary.org/obo/RO_0019000 regulates characteristic A relationship that holds between a process and a characteristic in which process (P) positively regulates characteristic (C) iff: P results in an increase in the intensity or magnitude of C. http://purl.obolibrary.org/obo/RO_0019002 negatively regulates characteristic http://purl.obolibrary.org/obo/RO_0019000 regulates characteristic A relationship that holds between a process and a characteristic in which process (P) negatively regulates characteristic (C) iff: P results in a decrease in the intensity or magnitude of C. http://purl.obolibrary.org/obo/RO_0002202 develops from http://purl.obolibrary.org/obo/RO_0002254 has developmental contribution from x develops from y if and only if either (a) x directly develops from y or (b) there exists some z such that x directly develops from z and z develops from y http://purl.obolibrary.org/obo/BFO_0000051 has part http://purl.obolibrary.org/obo/RO_0002131 overlaps a core relation that holds between a whole and its part http://purl.obolibrary.org/obo/RO_0000087 has role http://purl.obolibrary.org/obo/RO_0000053 has characteristic a relation between an independent continuant (the bearer) and a role, in which the role specifically depends on the bearer for its existence http://purl.obolibrary.org/obo/RO_0002327 enables http://purl.obolibrary.org/obo/RO_0002215 capable of c enables p iff c is capable of p and c acts to execute p. http://purl.obolibrary.org/obo/RO_0002333 enabled by http://purl.obolibrary.org/obo/RO_0002328 functionally related to inverse of enables http://purl.obolibrary.org/obo/RO_0002404 causally downstream of http://purl.obolibrary.org/obo/RO_0002427 causally downstream of or within inverse of upstream of http://purl.obolibrary.org/obo/RO_0002409 indirectly negatively regulates http://purl.obolibrary.org/obo/RO_0012012 indirectly regulates p indirectly negatively regulates q iff p is indirectly causally upstream of q and p negatively regulates q. http://purl.obolibrary.org/obo/RO_0002412 immediately causally upstream of http://purl.obolibrary.org/obo/RO_0002411 causally upstream of p is immediately causally upstream of q iff p is causally upstream of q, and the end of p is coincident with the beginning of q. http://purl.obolibrary.org/obo/RO_0002436 molecularly interacts with http://purl.obolibrary.org/obo/RO_0002434 interacts with An interaction relationship in which the two partners are molecular entities that directly physically interact with each other for example via a stable binding interaction or a brief interaction during which one modifies the other. http://purl.obolibrary.org/obo/RO_0002448 directly regulates activity of http://purl.obolibrary.org/obo/RO_0011002 regulates activity of The entity A, immediately upstream of the entity B, has an activity that regulates an activity performed by B. For example, A and B may be gene products and binding of B by A regulates the kinase activity of B. A and B can be physically interacting but not necessarily. Immediately upstream means there are no intermediate entity between A and B. http://purl.obolibrary.org/obo/RO_0002449 directly negatively regulates activity of http://purl.obolibrary.org/obo/RO_0002448 directly regulates activity of The entity A, immediately upstream of the entity B, has an activity that negatively regulates an activity performed by B. For example, A and B may be gene products and binding of B by A negatively regulates the kinase activity of B. http://purl.obolibrary.org/obo/RO_0002566 causally influences http://purl.obolibrary.org/obo/RO_0002506 causal relation between entities The entity or characteristic A is causally upstream of the entity or characteristic B, A having an effect on B. An entity corresponds to any biological type of entity as long as a mass is measurable. A characteristic corresponds to a particular specificity of an entity (e.g., phenotype, shape, size). http://purl.obolibrary.org/obo/RO_0002263 acts upstream of http://purl.obolibrary.org/obo/RO_0002264 acts upstream of or within c acts upstream of p if and only if c enables some f that is involved in p' and p' occurs chronologically before p, is not part of p, and affects the execution of p. c is a material entity and f, p, p' are processes. http://purl.obolibrary.org/obo/RO_0002304 causally upstream of, positive effect http://purl.obolibrary.org/obo/RO_0004047 causally upstream of or within, positive effect p is causally upstream of, positive effect q iff p is casually upstream of q, and the execution of p is required for the execution of q. http://purl.obolibrary.org/obo/RO_0002305 causally upstream of, negative effect http://purl.obolibrary.org/obo/RO_0004046 causally upstream of or within, negative effect p is causally upstream of, negative effect q iff p is casually upstream of q, and the execution of p decreases the execution of q. http://purl.obolibrary.org/obo/RO_0002131 overlaps http://purl.obolibrary.org/obo/RO_0002323 mereotopologically related to x overlaps y if and only if there exists some z such that x has part z and z part of y http://purl.obolibrary.org/obo/RO_0002254 has developmental contribution from http://purl.obolibrary.org/obo/RO_0002258 developmentally preceded by x has developmental contribution from y iff x has some part z such that z develops from y http://purl.obolibrary.org/obo/RO_0000091 has disposition http://purl.obolibrary.org/obo/RO_0000053 has characteristic a relation between an independent continuant (the bearer) and a disposition, in which the disposition specifically depends on the bearer for its existence http://purl.obolibrary.org/obo/RO_0000092 disposition of http://purl.obolibrary.org/obo/RO_0000052 characteristic of inverse of has disposition http://purl.obolibrary.org/obo/RO_0011002 regulates activity of http://purl.obolibrary.org/obo/RO_0002566 causally influences The entity A has an activity that regulates an activity of the entity B. For example, A and B are gene products where the catalytic activity of A regulates the kinase activity of B. http://purl.obolibrary.org/obo/BFO_0000062 preceded by http://purl.obolibrary.org/obo/RO_0002086 ends after x is preceded by y if and only if the time point at which y ends is before or equivalent to the time point at which x starts. Formally: x preceded by y iff ω(y) <= α(x), where α is a function that maps a process to a start point, and ω is a function that maps a process to an end point. http://purl.obolibrary.org/obo/RO_0000081 role of http://purl.obolibrary.org/obo/RO_0000052 characteristic of a relation between a role and an independent continuant (the bearer), in which the role specifically depends on the bearer for its existence http://purl.obolibrary.org/obo/RO_0002411 causally upstream of http://purl.obolibrary.org/obo/RO_0002418 causally upstream of or within p is causally upstream of q iff p is causally related to q, the end of p precedes the end of q, and p is not an occurrent part of q. http://purl.obolibrary.org/obo/BFO_0000050 part of http://purl.obolibrary.org/obo/RO_0002131 overlaps a core relation that holds between a part and its whole http://purl.obolibrary.org/obo/RO_0002211 regulates http://purl.obolibrary.org/obo/RO_0002411 causally upstream of p regulates q iff p is causally upstream of q, the execution of p is not constant and varies according to specific conditions, and p influences the rate or magnitude of execution of q due to an effect either on some enabler of q or some enabler of a part of q. http://purl.obolibrary.org/obo/RO_0002212 negatively regulates http://purl.obolibrary.org/obo/RO_0002211 regulates p negatively regulates q iff p regulates q, and p decreases the rate or magnitude of execution of q. http://purl.obolibrary.org/obo/RO_0002213 positively regulates http://purl.obolibrary.org/obo/RO_0002211 regulates p positively regulates q iff p regulates q, and p increases the rate or magnitude of execution of q. http://purl.obolibrary.org/obo/RO_0002180 has component http://purl.obolibrary.org/obo/BFO_0000051 has part w 'has component' p if w 'has part' p and w is such that it can be directly disassembled into into n parts p, p2, p3, ..., pn, where these parts are of similar type. http://purl.obolibrary.org/obo/RO_0002233 has input http://purl.obolibrary.org/obo/RO_0000057 has participant p has input c iff: p is a process, c is a material entity, c is a participant in p, c is present at the start of p, and the state of c is modified during p. http://purl.obolibrary.org/obo/RO_0002314 characteristic of part of http://purl.obolibrary.org/obo/RO_0002502 depends on q characteristic of part of w if and only if there exists some p such that q inheres in p and p part of w. http://purl.obolibrary.org/obo/RO_0002352 input of http://purl.obolibrary.org/obo/RO_0002328 functionally related to inverse of has input http://purl.obolibrary.org/obo/RO_0002203 develops into http://purl.obolibrary.org/obo/RO_0002387 has potential to develop into inverse of develops from http://purl.obolibrary.org/obo/RO_0002215 capable of http://purl.obolibrary.org/obo/RO_0002216 capable of part of A relation between a material entity (such as a cell) and a process, in which the material entity has the ability to carry out the process. http://purl.obolibrary.org/obo/RO_0002387 has potential to develop into http://purl.obolibrary.org/obo/RO_0002384 has developmental potential involving x has the potential to develop into y iff x develops into y or if x is capable of developing into y http://purl.obolibrary.org/obo/RO_0002023 directly negatively regulated by http://purl.obolibrary.org/obo/RO_0002022 directly regulated by Process(P2) is directly negatively regulated by process(P1) iff: P1 negatively regulates P2 via direct physical interaction between an agent executing P1 (or some part of P1) and an agent executing P2 (or some part of P2). For example, if protein A has protein binding activity(P1) that targets protein B and this binding negatively regulates the kinase activity (P2) of protein B then P2 directly negatively regulated by P1. http://purl.obolibrary.org/obo/RO_0002024 directly positively regulated by http://purl.obolibrary.org/obo/RO_0002022 directly regulated by Process(P2) is directly postively regulated by process(P1) iff: P1 positively regulates P2 via direct physical interaction between an agent executing P1 (or some part of P1) and an agent executing P2 (or some part of P2). For example, if protein A has protein binding activity(P1) that targets protein B and this binding positively regulates the kinase activity (P2) of protein B then P2 is directly postively regulated by P1. http://purl.obolibrary.org/obo/RO_0012011 indirectly causally upstream of http://purl.obolibrary.org/obo/RO_0002411 causally upstream of p is indirectly causally upstream of q iff p is causally upstream of q and there exists some process r such that p is causally upstream of r and r is causally upstream of q. http://purl.obolibrary.org/obo/RO_0012012 indirectly regulates http://purl.obolibrary.org/obo/RO_0012011 indirectly causally upstream of p indirectly regulates q iff p is indirectly causally upstream of q and p regulates q. http://purl.obolibrary.org/obo/RO_0002264 acts upstream of or within http://purl.obolibrary.org/obo/RO_0002500 causal agent in process c acts upstream of or within p if c is enables f, and f is causally upstream of or within p. c is a material entity and p is an process. http://purl.obolibrary.org/obo/RO_0002331 involved in http://purl.obolibrary.org/obo/RO_0002431 involved in or involved in regulation of c involved_in p if and only if c enables some process p', and p' is part of p http://purl.obolibrary.org/obo/RO_0002431 involved in or involved in regulation of http://purl.obolibrary.org/obo/RO_0002500 causal agent in process c involved in or regulates p if and only if either (i) c is involved in p or (ii) c is involved in regulation of p http://purl.obolibrary.org/obo/RO_0004031 enables subfunction http://purl.obolibrary.org/obo/RO_0002328 functionally related to Holds between an entity and an process P where the entity enables some larger compound process, and that larger process has-part P. http://purl.obolibrary.org/obo/RO_0004034 acts upstream of, positive effect http://purl.obolibrary.org/obo/RO_0004032 acts upstream of or within, positive effect c 'acts upstream of, positive effect' p if c is enables f, and f is causally upstream of p, and the direction of f is positive http://purl.obolibrary.org/obo/RO_0004035 acts upstream of, negative effect http://purl.obolibrary.org/obo/RO_0004033 acts upstream of or within, negative effect c 'acts upstream of, negative effect' p if c is enables f, and f is causally upstream of p, and the direction of f is negative http://purl.obolibrary.org/obo/RO_0002216 capable of part of http://purl.obolibrary.org/obo/RO_0002500 causal agent in process c stands in this relationship to p if and only if there exists some p' such that c is capable_of p', and p' is part_of p. http://purl.obolibrary.org/obo/RO_0002255 developmentally contributes to http://purl.obolibrary.org/obo/RO_0002385 has potential to developmentally contribute to inverse of has developmental contribution from http://purl.obolibrary.org/obo/RO_0002329 part of structure that is capable of http://purl.obolibrary.org/obo/RO_0002328 functionally related to this relation holds between c and p when c is part of some c', and c' is capable of p. http://purl.obolibrary.org/obo/RO_0002334 regulated by http://purl.obolibrary.org/obo/RO_0002427 causally downstream of or within inverse of regulates http://purl.obolibrary.org/obo/RO_0002335 negatively regulated by http://purl.obolibrary.org/obo/RO_0002334 regulated by inverse of negatively regulates http://purl.obolibrary.org/obo/RO_0002336 positively regulated by http://purl.obolibrary.org/obo/RO_0002334 regulated by inverse of positively regulates http://purl.obolibrary.org/obo/RO_0002385 has potential to developmentally contribute to http://purl.obolibrary.org/obo/RO_0002384 has developmental potential involving x has potential to developmentrally contribute to y iff x developmentally contributes to y or x is capable of developmentally contributing to y http://purl.obolibrary.org/obo/RO_0002418 causally upstream of or within http://purl.obolibrary.org/obo/RO_0002501 causal relation between processes p is 'causally upstream or within' q iff p is causally related to q, and the end of p precedes, or is coincident with, the end of q. http://purl.obolibrary.org/obo/RO_0002427 causally downstream of or within http://purl.obolibrary.org/obo/RO_0002501 causal relation between processes inverse of causally upstream of or within http://purl.obolibrary.org/obo/RO_0002500 causal agent in process http://purl.obolibrary.org/obo/RO_0002595 causal relation between material entity and a process A relationship between a material entity and a process where the material entity has some causal role that influences the process http://purl.obolibrary.org/obo/RO_0002501 causal relation between processes http://purl.obolibrary.org/obo/RO_0002410 causally related to p is causally related to q if and only if p or any part of p and q or any part of q are linked by a chain of events where each event pair is one where the execution of p influences the execution of q. p may be upstream, downstream, part of, or a container of q. http://purl.obolibrary.org/obo/RO_0002584 has part structure that is capable of http://purl.obolibrary.org/obo/RO_0002595 causal relation between material entity and a process s 'has part structure that is capable of' p if and only if there exists some part x such that s 'has part' x and x 'capable of' p http://purl.obolibrary.org/obo/RO_0002595 causal relation between material entity and a process http://purl.obolibrary.org/obo/RO_0002410 causally related to A relationship that holds between a material entity and a process in which causality is involved, with either the material entity or some part of the material entity exerting some influence over the process, or the process influencing some aspect of the material entity. http://purl.obolibrary.org/obo/RO_0002596 capable of regulating http://purl.obolibrary.org/obo/RO_0002500 causal agent in process Holds between c and p if and only if c is capable of some activity a, and a regulates p. http://purl.obolibrary.org/obo/RO_0002597 capable of negatively regulating http://purl.obolibrary.org/obo/RO_0002596 capable of regulating Holds between c and p if and only if c is capable of some activity a, and a negatively regulates p. http://purl.obolibrary.org/obo/RO_0002598 capable of positively regulating http://purl.obolibrary.org/obo/RO_0002596 capable of regulating Holds between c and p if and only if c is capable of some activity a, and a positively regulates p. http://purl.obolibrary.org/obo/RO_0002608 process has causal agent http://purl.obolibrary.org/obo/RO_0002410 causally related to Inverse of 'causal agent in process' http://purl.obolibrary.org/obo/RO_0002015 has positive regulatory component activity http://purl.obolibrary.org/obo/RO_0002013 has regulatory component activity A relationship that holds between a GO molecular function and a component of that molecular function that positively regulates the activity of the whole. More formally, A 'has regulatory component activity' B iff :A and B are GO molecular functions (GO_0003674), A has_component B and A is positively regulated by B. http://purl.obolibrary.org/obo/RO_0002013 has regulatory component activity http://purl.obolibrary.org/obo/RO_0002017 has component activity A 'has regulatory component activity' B if A and B are GO molecular functions (GO_0003674), A has_component B and A is regulated by B. http://purl.obolibrary.org/obo/RO_0002014 has negative regulatory component activity http://purl.obolibrary.org/obo/RO_0002013 has regulatory component activity A relationship that holds between a GO molecular function and a component of that molecular function that negatively regulates the activity of the whole. More formally, A 'has regulatory component activity' B iff :A and B are GO molecular functions (GO_0003674), A has_component B and A is negatively regulated by B. http://purl.obolibrary.org/obo/RO_0002407 indirectly positively regulates http://purl.obolibrary.org/obo/RO_0012012 indirectly regulates p indirectly positively regulates q iff p is indirectly causally upstream of q and p positively regulates q. http://purl.obolibrary.org/obo/RO_0002428 involved in regulation of http://purl.obolibrary.org/obo/RO_0002431 involved in or involved in regulation of c involved in regulation of p if c is involved in some p' and p' regulates some p http://purl.obolibrary.org/obo/RO_0002429 involved in positive regulation of http://purl.obolibrary.org/obo/RO_0002428 involved in regulation of c involved in regulation of p if c is involved in some p' and p' positively regulates some p http://purl.obolibrary.org/obo/RO_0002430 involved in negative regulation of http://purl.obolibrary.org/obo/RO_0002428 involved in regulation of c involved in regulation of p if c is involved in some p' and p' negatively regulates some p http://purl.obolibrary.org/obo/RO_0002450 directly positively regulates activity of http://purl.obolibrary.org/obo/RO_0002448 directly regulates activity of The entity A, immediately upstream of the entity B, has an activity that positively regulates an activity performed by B. For example, A and B may be gene products and binding of B by A positively regulates the kinase activity of B. http://purl.obolibrary.org/obo/RO_0002578 directly regulates http://purl.obolibrary.org/obo/RO_0002211 regulates p directly regulates q iff p is immediately causally upstream of q and p regulates q. http://purl.obolibrary.org/obo/RO_0002629 directly positively regulates http://purl.obolibrary.org/obo/RO_0002578 directly regulates p directly positively regulates q iff p is immediately causally upstream of q, and p positively regulates q. http://purl.obolibrary.org/obo/RO_0002630 directly negatively regulates http://purl.obolibrary.org/obo/RO_0002578 directly regulates p directly negatively regulates q iff p is immediately causally upstream of q, and p negatively regulates q. http://purl.obolibrary.org/obo/RO_0002090 immediately precedes http://purl.obolibrary.org/obo/BFO_0000063 precedes http://purl.obolibrary.org/obo/RO_0002405 immediately causally downstream of http://purl.obolibrary.org/obo/RO_0002404 causally downstream of http://purl.obolibrary.org/obo/RO_0002017 has component activity http://purl.obolibrary.org/obo/RO_0002018 has component process http://purl.obolibrary.org/obo/RO_0002447 phosphorylates http://purl.obolibrary.org/obo/RO_0002436 molecularly interacts with http://purl.obolibrary.org/obo/RO_0002559 causally influenced by http://purl.obolibrary.org/obo/RO_0002506 causal relation between entities http://purl.obolibrary.org/obo/RO_0002563 interaction relation helper property http://purl.obolibrary.org/obo/RO_0002464 helper property (not for use in curation) http://purl.obolibrary.org/obo/RO_0002564 molecular interaction relation helper property http://purl.obolibrary.org/obo/RO_0002563 interaction relation helper property http://purl.obolibrary.org/obo/RO_0002481 is kinase activity http://purl.obolibrary.org/obo/RO_0002564 molecular interaction relation helper property http://purl.obolibrary.org/obo/RO_0002087 immediately preceded by http://purl.obolibrary.org/obo/BFO_0000062 preceded by http://purl.obolibrary.org/obo/RO_0002086 ends after http://purl.obolibrary.org/obo/RO_0002222 temporally related to http://purl.obolibrary.org/obo/RO_0004033 acts upstream of or within, negative effect http://purl.obolibrary.org/obo/RO_0002264 acts upstream of or within http://purl.obolibrary.org/obo/RO_0004032 acts upstream of or within, positive effect http://purl.obolibrary.org/obo/RO_0002264 acts upstream of or within http://purl.obolibrary.org/obo/RO_0002022 directly regulated by http://purl.obolibrary.org/obo/RO_0002334 regulated by http://purl.obolibrary.org/obo/RO_0002506 causal relation between entities http://purl.obolibrary.org/obo/RO_0002410 causally related to http://purl.obolibrary.org/obo/RO_0004046 causally upstream of or within, negative effect http://purl.obolibrary.org/obo/RO_0002418 causally upstream of or within http://purl.obolibrary.org/obo/RO_0004047 causally upstream of or within, positive effect http://purl.obolibrary.org/obo/RO_0002418 causally upstream of or within http://purl.obolibrary.org/obo/RO_0002324 developmentally related to A relationship that holds between entities participating in some developmental process (GO:0032502) http://purl.obolibrary.org/obo/IAO_0000136 is about A (currently) primitive relation that relates an information artifact to an entity. http://purl.obolibrary.org/obo/RO_0000053 has characteristic Inverse of characteristic_of http://purl.obolibrary.org/obo/RO_0000056 participates in a relation between a continuant and a process, in which the continuant is somehow involved in the process http://purl.obolibrary.org/obo/RO_0000057 has participant a relation between a process and a continuant, in which the continuant is somehow involved in the process http://purl.obolibrary.org/obo/RO_0017001 device utilizes material X device utilizes material Y means X and Y are material entities, and X is capable of some process P that has input Y. http://purl.obolibrary.org/obo/RO_0002434 interacts with A relationship that holds between two entities in which the processes executed by the two entities are causally connected. http://purl.obolibrary.org/obo/RO_0002323 mereotopologically related to A mereological relationship or a topological relationship http://purl.obolibrary.org/obo/RO_0002328 functionally related to A grouping relationship for any relationship directly involving a function, or that holds because of a function of one of the related entities. http://purl.obolibrary.org/obo/RO_0020105 is anatomical entity This property only applies to anatomical entities. http://purl.obolibrary.org/obo/FBbi_00000346 makes_use_of The child is an essential component of the parent device, or plays an essential role in performance of the parent function. http://purl.obolibrary.org/obo/RO_0002410 causally related to relation that links two events, processes, states, or objects such that one event, process, state, or object (a cause) contributes to the production of another event, process, state, or object (an effect) where the cause is partly or wholly responsible for the effect, and the effect is partly or wholly dependent on the cause. http://purl.obolibrary.org/obo/RO_0002464 helper property (not for use in curation) http://purl.obolibrary.org/obo/RO_0002222 temporally related to http://purl.obolibrary.org/obo/RO_0002502 depends on