Term IRI Term label Parent term IRI Parent term label Alternative term Definition http://purl.obolibrary.org/obo/GALLONT_0000009 monothalamous http://purl.obolibrary.org/obo/GALLONT_0000007 internal quality unilocular An internal gall trait in which a gall has a single larval chamber for the gall-inducing insect. http://purl.obolibrary.org/obo/GALLONT_0000011 polythalamous http://purl.obolibrary.org/obo/GALLONT_0000007 internal quality multilocular An internal gall trait in which more than one larval chamber is present for the inducer species. http://purl.obolibrary.org/obo/GALLONT_0000015 cupuliform http://purl.obolibrary.org/obo/PATO_0002266 3-D shape cup-like A shape inhering in a bearer by virtue of the bearer resembling a cup, with a depression and rim-like edge apically. http://purl.obolibrary.org/obo/GALLONT_0000022 corrugated http://purl.obolibrary.org/obo/PATO_0000150 texture ribbed A texture quality in which the surface is marked by alternating parallel ridges and grooves. http://purl.obolibrary.org/obo/GALLONT_0000027 moss-like http://purl.obolibrary.org/obo/PATO_0000150 texture mossy A texture quality in which a surface has the appearance and/or consistency of moss, especially those species in Polytrichaceae (Bryophyta). http://purl.obolibrary.org/obo/GALLONT_0000029 felt-like http://purl.obolibrary.org/obo/PATO_0000454 hairy felted A quality inhering in a bearer by virtue of the bearer's being covered in short, dense, fine hairs, which give the appearance of felt. http://purl.obolibrary.org/obo/GALLONT_0000038 rosette gall http://purl.obolibrary.org/obo/UBERON_0001062 anatomical entity bunch gall A plant gall that is located on a bud and which consists of layers of scale leaves or similar phyllomes that surround the inducer's chamber. http://purl.obolibrary.org/obo/PATO_0000060 spatial pattern http://purl.obolibrary.org/obo/PATO_0000051 morphology distribution A spatial quality inhering in a bearer by virtue of the bearer's exhibiting repetition of placement of its parts. http://purl.obolibrary.org/obo/PATO_0000464 inconspicuous http://purl.obolibrary.org/obo/PATO_0001998 conspicuousness cryptic A quality inhering in a bearer by virtue of not being clearly visible. For a gall, a quality in which the gall is not clearly visible externally. http://purl.obolibrary.org/obo/PATO_0001480 spongy http://purl.obolibrary.org/obo/PATO_0000141 structure sponge-like A structural quality inhering in a bearer by virtue of the bearer's resembling a sponge in elasticity, absorbency, or porousness. http://purl.obolibrary.org/obo/PATO_0001500 tapered http://purl.obolibrary.org/obo/PATO_0001419 sharp taper A shape quality inhering in a bearer by virtue of the bearer's being gradually narrower or thinner toward one end. http://purl.obolibrary.org/obo/PATO_0001532 mono-colored http://purl.obolibrary.org/obo/PATO_0000019 color pattern uniformly colored A color pattern inhering in a bearer by virtue of the bearer's having one hue. http://purl.obolibrary.org/obo/PATO_0001730 deciduous (generic) http://purl.obolibrary.org/obo/PATO_0001729 shedability detachable A quality inhering in a bearer by virtue of the bearer's disposition to shed body parts. http://purl.obolibrary.org/obo/PATO_0001732 non-deciduous http://purl.obolibrary.org/obo/PATO_0001729 shedability integral A quality inhering in a plant by virtue of the bearer's disposition to not shed any body part. http://purl.obolibrary.org/obo/PATO_0001878 sigmoid http://purl.obolibrary.org/obo/PATO_0000052 shape sigmoidal A shape quality inhering in a bearer by virtue of the bearer's consisting of two curves, in opposite directions. S-shaped. http://purl.obolibrary.org/obo/PATO_0001883 clavate http://purl.obolibrary.org/obo/PATO_0002008 concave 3-D shape club-shaped A concave 3-D shape quality inhering in a bearer by virtue of the bearer's gradually becoming thicker towards the end. http://purl.obolibrary.org/obo/PATO_0002335 tholiform http://purl.obolibrary.org/obo/PATO_0000052 shape hemispheroid A shape quality inhering in a bearer by virtue of the bearer's being dome-shaped. http://purl.obolibrary.org/obo/PATO_0002427 knobbled http://purl.obolibrary.org/obo/PATO_0001925 surface feature shape tuberculose A surface feature shape having numerous very small circular rounded projections or protuberances. http://purl.obolibrary.org/obo/PATO_0005014 subspherical http://purl.obolibrary.org/obo/PATO_0001865 spheroid globular A spheroid shape quality inhering in a bearer by virtue of the bearer's being nearly, but not perfectly, spherical. http://purl.obolibrary.org/obo/GALLONT_0000002 emergence hole http://purl.obolibrary.org/obo/PO_0025117 plant anatomical space An anatomical space that is an opening through which a gall-inhabiting organism has emerged. http://purl.obolibrary.org/obo/GALLONT_0000003 plant gall cavity http://purl.obolibrary.org/obo/PO_0025117 plant anatomical space A plant anatomical space that is located inside a gall. http://purl.obolibrary.org/obo/GALLONT_0000004 kapéllo http://purl.obolibrary.org/obo/PO_0025496 multi-tissue plant structure A gall structure that is attractive to another organism, usually ants, and which facilitates dispersal of the gall http://purl.obolibrary.org/obo/GALLONT_0000005 larval chamber http://purl.obolibrary.org/obo/PO_0025498 cardinal part of multi-tissue plant structure A gall structure wherein the gall inducer and/or its associates resides and which includes a portion of nutritive tissue. http://purl.obolibrary.org/obo/GALLONT_0000006 detached chamber http://purl.obolibrary.org/obo/GALLONT_0000005 larval chamber A larval chamber that is detached from the plant but enclosed in a cavity. http://purl.obolibrary.org/obo/GALLONT_0000007 internal quality http://purl.obolibrary.org/obo/PATO_0000051 morphology A quality that inheres in the portion of a gall that is internal. http://purl.obolibrary.org/obo/GALLONT_0000008 filamentous http://purl.obolibrary.org/obo/GALLONT_0000007 internal quality A gall trait in which a larval chamber is suspended medially in the parenchyma by radiating plant fibers inside a largely hollow chamber. http://purl.obolibrary.org/obo/GALLONT_0000010 pithy http://purl.obolibrary.org/obo/GALLONT_0000007 internal quality An internal gall trait in which the tissue is reminiscent of pith, the relatively soft tissue at the center of a shoot axis. http://purl.obolibrary.org/obo/GALLONT_0000012 solid http://purl.obolibrary.org/obo/GALLONT_0000007 internal quality An internal gall trait in which the gall lacks macroscopic anatomical space(s) that is/are not the larval chamber. http://purl.obolibrary.org/obo/GALLONT_0000013 nectarous http://purl.obolibrary.org/obo/PATO_0000051 morphology A gall quality in which a gall has nectaries present. http://purl.obolibrary.org/obo/GALLONT_0000014 caneliform http://purl.obolibrary.org/obo/PATO_0002266 3-D shape A shape quality inhering in a bearer by virtue of the bearer's having a shape resembling a canelé, a French pastry. http://purl.obolibrary.org/obo/GALLONT_0000016 echinoform http://purl.obolibrary.org/obo/PATO_0002266 3-D shape A shape trait in which a gall has radiating, spine-like processes that resemble the spines of a sea urchin (cf. Cidaridae). http://purl.obolibrary.org/obo/GALLONT_0000017 infundibuliform http://purl.obolibrary.org/obo/PATO_0000052 shape A shape quality inhering in a bearer by virtue of the bearer being shaped like a funnel, abruptly widening from a narrow cylindrical part, to a wider distal part. http://purl.obolibrary.org/obo/GALLONT_0000018 lenticular http://purl.obolibrary.org/obo/PATO_0001865 spheroid A shape quality inhering in a bearer by virtue of the bearer's being shaped like a lentil, with convex upper and lower surfaces. http://purl.obolibrary.org/obo/GALLONT_0000019 semiterete http://purl.obolibrary.org/obo/PATO_0000052 shape A shape quality inhering in a bearer by virtue of the bearer's appearing semicircular in cross-section, flat on one side, rounded on the other. http://purl.obolibrary.org/obo/GALLONT_0000020 confluent http://purl.obolibrary.org/obo/PATO_0000060 spatial pattern A spatial pattern (or gall arrangement) in which adjacent objects (galls) are positioned in such a way that each gall cannot readily be distinguished as an individual. http://purl.obolibrary.org/obo/GALLONT_0000021 linear color gradient http://purl.obolibrary.org/obo/PATO_0001533 multi-colored A color pattern inhering in a bearer by virtue of bearer's being marked with one hue or degree of saturation near one pole and a different hue or degree of saturation at the opposite pole and a color gradient between the two poles. http://purl.obolibrary.org/obo/GALLONT_0000023 crackled http://purl.obolibrary.org/obo/PATO_0000700 rough A texture quality in which the surface is marked by a network of cracks, as in craquelure. http://purl.obolibrary.org/obo/GALLONT_0000024 dimpled http://purl.obolibrary.org/obo/PATO_0001925 surface feature shape A surface feature shape in which a surface has a dimple, a depression or indentation on a surface. http://purl.obolibrary.org/obo/GALLONT_0000026 faceted http://purl.obolibrary.org/obo/PATO_0000150 texture A texture quality in which a surface is covered or partially by with facets. http://purl.obolibrary.org/obo/GALLONT_0000028 papery http://purl.obolibrary.org/obo/PATO_0000150 texture A texture quality in which a surface has the consistency and thickness of a paper bag (thin and dry). http://purl.obolibrary.org/obo/GALLONT_0000030 pruinose http://purl.obolibrary.org/obo/PATO_0002012 coating A coating quality in which a surface is covered in a whitish, powdery film or dust. http://purl.obolibrary.org/obo/GALLONT_0000031 semideciduous http://purl.obolibrary.org/obo/PATO_0001729 shedability A shedability quality in which a part can readily be detached from its location but it normally (in nature) stays attached; detachable. http://purl.obolibrary.org/obo/GALLONT_0000032 brittle http://purl.obolibrary.org/obo/PATO_0001543 flexibility A structural quality inhering in an object by virtue of the object's susceptibility to breaks, without significant deformation (strain) when subjected to stress. http://purl.obolibrary.org/obo/GALLONT_0000034 blister gall http://purl.obolibrary.org/obo/GALLONT_0000025 plant gall A plant gall that is part of a leaf and which appears as a portion of swollen tissue, similar to a blister. http://purl.obolibrary.org/obo/GALLONT_0000035 bud gall http://purl.obolibrary.org/obo/GALLONT_0000025 plant gall A plant gall that is located on a bud. http://purl.obolibrary.org/obo/GALLONT_0000036 bullet gall http://purl.obolibrary.org/obo/GALLONT_0000025 plant gall A plant gall that is monothalamous and solid, with a shape reminiscent of a bullet. Gall is usually subspherical or subelliptical in shape. http://purl.obolibrary.org/obo/GALLONT_0000037 roly-poly gall http://purl.obolibrary.org/obo/GALLONT_0000025 plant gall A plant gall that has a detached larval chamber capable of rolling around a hollow chamber located inside the gall. http://purl.obolibrary.org/obo/GALLONT_0000041 larval cavity http://purl.obolibrary.org/obo/GALLONT_0000003 plant gall cavity A cavity that is occupied by one or more gall inhabitants. http://purl.obolibrary.org/obo/PATO_0000001 quality http://purl.obolibrary.org/obo/BFO_0000020 characteristic A dependent entity that inheres in a bearer by virtue of how the bearer is related to other entities http://purl.obolibrary.org/obo/PATO_0000014 color http://purl.obolibrary.org/obo/PATO_0001300 optical quality A composite chromatic quality composed of hue, saturation and intensity parts. http://purl.obolibrary.org/obo/PATO_0000019 color pattern http://purl.obolibrary.org/obo/PATO_0000060 spatial pattern A chromatic property that is the relative position of different hues or degrees of saturation. http://purl.obolibrary.org/obo/PATO_0000051 morphology http://purl.obolibrary.org/obo/PATO_0001241 physical object quality A quality of a single physical entity inhering in the bearer by virtue of the bearer's size or shape or structure. http://purl.obolibrary.org/obo/PATO_0000052 shape http://purl.obolibrary.org/obo/PATO_0000051 morphology A morphological quality inhering in a bearer by virtue of the bearer's ratios of distances between its features (points, edges, surfaces and also holes etc). http://purl.obolibrary.org/obo/PATO_0000066 pilosity http://purl.obolibrary.org/obo/PATO_0000150 texture A texture quality inhering in a bearer by virtue of the bearer's having hair or bristles. http://purl.obolibrary.org/obo/PATO_0000069 deviation (from_normal) http://purl.obolibrary.org/obo/PATO_0000068 qualitative A quality inhering in a bearer by virtue of the whether the bearer differs from normal or average. http://purl.obolibrary.org/obo/PATO_0000070 amount http://purl.obolibrary.org/obo/PATO_0000068 qualitative The number of entities of this type that are part of the whole organism. For galls, the number of entities of some type that are part of or located in a whole gall. http://purl.obolibrary.org/obo/PATO_0000117 size http://purl.obolibrary.org/obo/PATO_0000051 morphology A morphology quality inhering in a bearer by virtue of the bearer's physical magnitude. http://purl.obolibrary.org/obo/PATO_0000119 height http://purl.obolibrary.org/obo/PATO_0001708 1-D extent A 1-D extent quality inhering in a bearer by virtue of the bearer's vertical dimension of extension. http://purl.obolibrary.org/obo/PATO_0000140 position http://purl.obolibrary.org/obo/PATO_0001018 physical quality A spatial quality inhering in a bearer by virtue of the bearer's spatial location relative to other objects in the vicinity. http://purl.obolibrary.org/obo/PATO_0000141 structure http://purl.obolibrary.org/obo/PATO_0000051 morphology A morphology quality inhering in a bearer by virtue of the bearer's relative position, shape, arrangements and connectivity of an organism's various parts; the pattern underlying its form. http://purl.obolibrary.org/obo/PATO_0000150 texture http://purl.obolibrary.org/obo/PATO_0000051 morphology A morphologic quality inhering in a bearer by virtue of the bearer's relative size, organization and distribution of its surface elements or the representation or invention of the appearance of its surface; visual and tactile surface characteristics. http://purl.obolibrary.org/obo/PATO_0000165 time http://purl.obolibrary.org/obo/PATO_0001018 physical quality A quality in which events occur in sequence. http://purl.obolibrary.org/obo/PATO_0000309 young http://purl.obolibrary.org/obo/PATO_0000011 age An age which is relatively low. http://purl.obolibrary.org/obo/PATO_0000317 black http://purl.obolibrary.org/obo/PATO_0000014 color A color that lacks any hues as parts. http://purl.obolibrary.org/obo/PATO_0000320 green http://purl.obolibrary.org/obo/PATO_0000014 color A color hue with medium-low wavelength of that portion of the visible spectrum lying between yellow and blue, evoked in the human observer by radiant energy with wavelengths of approximately 490 to 570 nanometers. http://purl.obolibrary.org/obo/PATO_0000322 red http://purl.obolibrary.org/obo/PATO_0000014 color A color hue with high wavelength of the long-wave end of the visible spectrum, evoked in the human observer by radiant energy with wavelengths of approximately 630 to 750 nanometers. http://purl.obolibrary.org/obo/PATO_0000324 yellow http://purl.obolibrary.org/obo/PATO_0000014 color A color hue with medium wavelength of that portion of the visible spectrum lying between orange and green, evoked in the human observer by radiant energy with wavelengths of approximately 570 to 590 nanometers. http://purl.obolibrary.org/obo/PATO_0000329 blotchy http://purl.obolibrary.org/obo/PATO_0001533 multi-colored A color pattern inhering in a bearer by virtue of bearer's being marked with irregularly shaped spots or blots of a different hue or degree of saturation. http://purl.obolibrary.org/obo/PATO_0000330 irregular spatial pattern http://purl.obolibrary.org/obo/PATO_0000060 spatial pattern A spatial pattern inhering in a bearer by virtue of the bearer's magnitude of or the relationships between its repeated parts lack consistency. http://purl.obolibrary.org/obo/PATO_0000333 spotted http://purl.obolibrary.org/obo/PATO_0001533 multi-colored A color pattern inhering in a bearer by virtue of bearer's being marked with a round area of different hue or degree of saturation. http://purl.obolibrary.org/obo/PATO_0000406 curved http://purl.obolibrary.org/obo/PATO_0001591 curvature A curvature quality inhering in a bearer by virtue of the bearer's having or being marked by a curve or smoothly rounded bend. http://purl.obolibrary.org/obo/PATO_0000409 oblate http://purl.obolibrary.org/obo/PATO_0001865 spheroid A spheroid quality inhering in a bearer by virtue of the bearer's exhibiting an equatorial diameter greater than its polar diameter. http://purl.obolibrary.org/obo/PATO_0000411 circular http://purl.obolibrary.org/obo/PATO_0000947 elliptic A shape quality inhering in a bearer by virtue of the bearer's being such that every part of the surface or the circumference is equidistant from the center. http://purl.obolibrary.org/obo/PATO_0000453 glabrous http://purl.obolibrary.org/obo/PATO_0000066 pilosity A pilosity quality inhering in a bearer by virtue of the bearer's lack of hairs or bristles. http://purl.obolibrary.org/obo/PATO_0000454 hairy http://purl.obolibrary.org/obo/PATO_0000066 pilosity A pilosity quality inhering in a bearer by virtue of the bearer's being covered with hair or hairlike projections. http://purl.obolibrary.org/obo/PATO_0000461 normal http://purl.obolibrary.org/obo/PATO_0000068 qualitative A quality inhering in a bearer by virtue of the bearer's exhibiting no deviation from normal or average. http://purl.obolibrary.org/obo/PATO_0000463 conspicuous http://purl.obolibrary.org/obo/PATO_0001998 conspicuousness A quality inhering in a bearer by virtue of being clearly visible. For a gall, a quality in which the gall is clearly visible externally. http://purl.obolibrary.org/obo/PATO_0000467 present http://purl.obolibrary.org/obo/PATO_0000070 amount A quality inhering in a bearer by virtue of the bearer's existence. http://purl.obolibrary.org/obo/PATO_0000470 increased amount http://purl.obolibrary.org/obo/PATO_0002300 increased quality An amount which is relatively high. http://purl.obolibrary.org/obo/PATO_0000570 increased height http://purl.obolibrary.org/obo/PATO_0000586 increased size A height which is relatively high. http://purl.obolibrary.org/obo/PATO_0000573 increased length http://purl.obolibrary.org/obo/PATO_0000122 length A length quality which is relatively large. http://purl.obolibrary.org/obo/PATO_0000586 increased size http://purl.obolibrary.org/obo/PATO_0002305 increased object quality A size quality which is relatively high. http://purl.obolibrary.org/obo/PATO_0000600 increased width http://purl.obolibrary.org/obo/PATO_0000921 width A width which is relatively large. http://purl.obolibrary.org/obo/PATO_0000623 exserted http://purl.obolibrary.org/obo/PATO_0001598 protruding A quality inhering in a bearer by virtue of the bearer's protruding or projecting from the body. http://purl.obolibrary.org/obo/PATO_0000700 rough http://purl.obolibrary.org/obo/PATO_0000150 texture A texture quality inhering in a bearer by virtue of the bearer's irregular surface. http://purl.obolibrary.org/obo/PATO_0000701 smooth http://purl.obolibrary.org/obo/PATO_0000150 texture A texture quality inhering in a bearer by virtue of the bearer's processing a surface free of roughness or irregularities. http://purl.obolibrary.org/obo/PATO_0000921 width http://purl.obolibrary.org/obo/PATO_0001708 1-D extent A 1-D extent quality which is equal to the distance from one side of an object to another side which is opposite. http://purl.obolibrary.org/obo/PATO_0000944 sharpness http://purl.obolibrary.org/obo/PATO_0000052 shape A shape quality inhering in a bearer by virtue of the bearer's having a sharp or tapered end or point. http://purl.obolibrary.org/obo/PATO_0000947 elliptic http://purl.obolibrary.org/obo/PATO_0002318 superelliptic A spheroid quality inhering in a bearer by virtue of the bearer's being oval with two axes of symmetry, as produced by a conical section. http://purl.obolibrary.org/obo/PATO_0000952 brown http://purl.obolibrary.org/obo/PATO_0000014 color A color consisting of dark orange, red, of very low intensity. http://purl.obolibrary.org/obo/PATO_0000954 pink http://purl.obolibrary.org/obo/PATO_0000322 red Red color having medium to high brightness and low to moderate saturation. http://purl.obolibrary.org/obo/PATO_0000957 opacity http://purl.obolibrary.org/obo/PATO_0001300 optical quality An optical quality which obtains by virtue of the ability of the bearer to absorb visible light. http://purl.obolibrary.org/obo/PATO_0000963 opaque http://purl.obolibrary.org/obo/PATO_0000957 opacity A optical quality inhering in a bearer by virtue of the bearer's not being clear; not transmitting or reflecting light or radiant energy. http://purl.obolibrary.org/obo/PATO_0000970 permeability http://purl.obolibrary.org/obo/PATO_0000141 structure A structural quality inhering in a bearer by virtue of the bearer's disposition to being permeated or pervaded by a gas or liquid (as by osmosis or diffusion). http://purl.obolibrary.org/obo/PATO_0000982 permeable http://purl.obolibrary.org/obo/PATO_0000970 permeability A permeability quality inhering in a bearer by virtue of the bearer's being capable to be permeated or pervaded by a gas or liquid (as by osmosis or diffusion). http://purl.obolibrary.org/obo/PATO_0001018 physical quality http://purl.obolibrary.org/obo/PATO_0001241 physical object quality A quality of a physical entity that exists through action of continuants at the physical level of organisation in relation to other entities. http://purl.obolibrary.org/obo/PATO_0001241 physical object quality http://purl.obolibrary.org/obo/PATO_0000001 quality A quality which inheres in a continuant. http://purl.obolibrary.org/obo/PATO_0001246 light brown http://purl.obolibrary.org/obo/PATO_0000952 brown A color consisting of brown hue and high brightness. http://purl.obolibrary.org/obo/PATO_0001250 light green http://purl.obolibrary.org/obo/PATO_0000320 green A color consisting of green hue and high brightness. http://purl.obolibrary.org/obo/PATO_0001264 light yellow http://purl.obolibrary.org/obo/PATO_0000324 yellow A color consisting of yellow hue and high brightness. http://purl.obolibrary.org/obo/PATO_0001287 red brown http://purl.obolibrary.org/obo/PATO_0000952 brown A color consisting of red and brown hue. http://purl.obolibrary.org/obo/PATO_0001300 optical quality http://purl.obolibrary.org/obo/PATO_0070060 quality of interaction of a substance with electromagnetic radiation An EM radiation quality in which the EM radiation is within the fiat range of the spectrum visible deemed to be light. http://purl.obolibrary.org/obo/PATO_0001332 amorphous http://purl.obolibrary.org/obo/PATO_0000051 morphology A morphology quality inhering in a bearer by virtue of the bearer's lack of distinct morphology. http://purl.obolibrary.org/obo/PATO_0001334 diameter http://purl.obolibrary.org/obo/PATO_0001708 1-D extent A length quality which is equal to the length of any straight line segment that passes through the center of a circle and whose endpoints are on the circular boundary. http://purl.obolibrary.org/obo/PATO_0001354 translucent http://purl.obolibrary.org/obo/PATO_0000957 opacity A optical quality inhering in a bearer by virtue of the bearer's exhibiting low opacity. http://purl.obolibrary.org/obo/PATO_0001359 rugose http://purl.obolibrary.org/obo/PATO_0001925 surface feature shape A surface feature shape quality inhering in a bearer by virtue of the bearer's having many wrinkles or creases on the surface. http://purl.obolibrary.org/obo/PATO_0001361 warty http://purl.obolibrary.org/obo/PATO_0000700 rough A texture quality inhering in a bearer by virtue of the bearer's being covered with warts or projections that resemble warts resulting in a hard rough surface. http://purl.obolibrary.org/obo/PATO_0001362 fragile http://purl.obolibrary.org/obo/PATO_0001662 fragility A structural quality inhering in a bearer by virtue of the bearer's disposition to being easily damaged or destroyed. http://purl.obolibrary.org/obo/PATO_0001365 spiny http://purl.obolibrary.org/obo/PATO_0001925 surface feature shape A surface feature shape quality inhering in a bearer by virtue of the bearer's having spines, thorns or similar thin projections on its surface. http://purl.obolibrary.org/obo/PATO_0001370 viscid http://purl.obolibrary.org/obo/PATO_0002012 coating A coating quality which is sticky or clammy. http://purl.obolibrary.org/obo/PATO_0001409 spindle-shaped http://purl.obolibrary.org/obo/PATO_0002007 convex 3-D shape A shape quality inhering in a bearer by virtue of the bearer's resembling a long tapered rod. http://purl.obolibrary.org/obo/PATO_0001419 sharp http://purl.obolibrary.org/obo/PATO_0000944 sharpness A shape quality inhering in a bearer by virtue of the bearer's terminating in a point or edge. http://purl.obolibrary.org/obo/PATO_0001435 attachment quality http://purl.obolibrary.org/obo/PATO_0000141 structure A structural quality inhering in a bearer by virtue of the bearer's having connection or association with another entity. http://purl.obolibrary.org/obo/PATO_0001436 sessile (sensu botany) http://purl.obolibrary.org/obo/PATO_0001435 attachment quality An attachment quality inhering in a flower by virtue of the bearer's lacking a stalk, as in flowers or leaves that grow directly from the stem. http://purl.obolibrary.org/obo/PATO_0001438 pedicellate http://purl.obolibrary.org/obo/PATO_0001435 attachment quality A attachment quality inhering in a bearer by virtue of the bearer's having or being supported by a pedicel or pedicle. http://purl.obolibrary.org/obo/PATO_0001475 increased position http://purl.obolibrary.org/obo/PATO_0002305 increased object quality A position which is relatively high. http://purl.obolibrary.org/obo/PATO_0001487 senescent http://purl.obolibrary.org/obo/PATO_0000011 age A time quality inhering in a bearer by virtue of the bearer's growing old; aging. http://purl.obolibrary.org/obo/PATO_0001499 spherical http://purl.obolibrary.org/obo/PATO_0001865 spheroid A spheroid quality inhering in a bearer by virtue of the bearer's resembling a ball (a sphere whose equatorial diameter is equal to the polar diameter). http://purl.obolibrary.org/obo/PATO_0001533 multi-colored http://purl.obolibrary.org/obo/PATO_0000019 color pattern A color pattern inhering in a bearer by virtue of bearer's having two or more hues or degrees of saturation. http://purl.obolibrary.org/obo/PATO_0001534 motley http://purl.obolibrary.org/obo/PATO_0001533 multi-colored A color pattern inhering in a bearer by virtue of bearer's having 3 or more hues or degrees of saturations. http://purl.obolibrary.org/obo/PATO_0001535 dappled http://purl.obolibrary.org/obo/PATO_0001533 multi-colored A color pattern inhering in a bearer by virtue of bearer's being marked with small spots, patches, or specks of hue or degree of saturation differing from that of the background. http://purl.obolibrary.org/obo/PATO_0001543 flexibility http://purl.obolibrary.org/obo/PATO_0001546 quality of a solid A physical quality inhering in a bearer by virtue of the bearer's disposition to being turned, bowed, or twisted without breaking. http://purl.obolibrary.org/obo/PATO_0001544 flexible http://purl.obolibrary.org/obo/PATO_0001543 flexibility A physical quality inhering in a bearer by virtue of the bearer's ability of being turned, bowed, or twisted without breaking. http://purl.obolibrary.org/obo/PATO_0001555 has number of http://purl.obolibrary.org/obo/PATO_0001241 physical object quality The number of parts of a particular type that the bearer entity has. This is a relational quality, and thus holds between two entities: the bearer of the quality, and the type of parts. http://purl.obolibrary.org/obo/PATO_0001577 increased permeability http://purl.obolibrary.org/obo/PATO_0002305 increased object quality A permeability which is relatively high. http://purl.obolibrary.org/obo/PATO_0001591 curvature http://purl.obolibrary.org/obo/PATO_0000052 shape A surface shape quality inhering in a bearer by virtue of the bearer's exhibiting a degree of bending. http://purl.obolibrary.org/obo/PATO_0001592 increased curvature http://purl.obolibrary.org/obo/PATO_0002305 increased object quality A curvature which is relatively high. http://purl.obolibrary.org/obo/PATO_0001598 protruding http://purl.obolibrary.org/obo/PATO_0001018 physical quality A quality inhering in a bearer by virtue of the bearer's extending out above or beyond a surface or boundary. http://purl.obolibrary.org/obo/PATO_0001609 scattered http://purl.obolibrary.org/obo/PATO_0000060 spatial pattern A spatial pattern inhering in a bearer by virtue of the bearer's being scattered; spread irregularly, and at a distance from each other. http://purl.obolibrary.org/obo/PATO_0001629 aggregated http://purl.obolibrary.org/obo/PATO_0000330 irregular spatial pattern A spatial pattern inhering in a bearer by virtue of the bearer's being gathered or tending to gather into a mass or whole. http://purl.obolibrary.org/obo/PATO_0001662 fragility http://purl.obolibrary.org/obo/PATO_0000141 structure A structural quality inhering in a bearer by virtue of the bearer's disposition to being damaged or destroyed. http://purl.obolibrary.org/obo/PATO_0001708 1-D extent http://purl.obolibrary.org/obo/PATO_0000117 size A size quality inhering in an bearer by virtue of the bearer's extension in one dimension. http://purl.obolibrary.org/obo/PATO_0001714 increased diameter http://purl.obolibrary.org/obo/PATO_0001334 diameter A diameter which is relatively large. http://purl.obolibrary.org/obo/PATO_0001716 non-fragile http://purl.obolibrary.org/obo/PATO_0001662 fragility A structural quality inhering in a bearer by virtue of the bearer's ability to withstand great strain without tearing or breaking. http://purl.obolibrary.org/obo/PATO_0001729 shedability http://purl.obolibrary.org/obo/PATO_0001995 organismal quality An organismal quality inhering in a bearer by virtue of the bearer's disposition to lose an entity by natural process. http://purl.obolibrary.org/obo/PATO_0001764 increased age http://purl.obolibrary.org/obo/PATO_0000011 age An age which is high relative to the normal or average. http://purl.obolibrary.org/obo/PATO_0001776 increased flexibility http://purl.obolibrary.org/obo/PATO_0002305 increased object quality A flexibility which is relatively high. http://purl.obolibrary.org/obo/PATO_0001851 swollen http://purl.obolibrary.org/obo/PATO_0000141 structure A structure quality inhering in a bearer by virtue of the bearer's exhibiting transient abnormal enlargement, not due to cell proliferation. http://purl.obolibrary.org/obo/PATO_0001857 concave http://purl.obolibrary.org/obo/PATO_0002005 concavity A shape quality in a bearer by virtue of the bearer's curving inward. http://purl.obolibrary.org/obo/PATO_0001865 spheroid http://purl.obolibrary.org/obo/PATO_0002007 convex 3-D shape A convex 3-D shape quality inhering in a bearer by virtue of the bearer's having a quadric surface in three dimensions obtained by rotating an ellipse about one of its principal axes. Includes spheres and oblate/prolate spheroids. http://purl.obolibrary.org/obo/PATO_0001871 reniform http://purl.obolibrary.org/obo/PATO_0002008 concave 3-D shape A concave 3-D shape quality inhering in a bearer by virtue of the bearer's having the shape of a kidney. http://purl.obolibrary.org/obo/PATO_0001873 cylindrical http://purl.obolibrary.org/obo/PATO_0002007 convex 3-D shape A convex 3-D shape quality inhering in a bearer by virtue of the bearer's exhibiting a consistently-sized round cross section. http://purl.obolibrary.org/obo/PATO_0001874 discoid http://purl.obolibrary.org/obo/PATO_0001873 cylindrical A shape quality inhering in a bearer by virtue of the bearer's being cylindrical, in which the height is less than the diameter. http://purl.obolibrary.org/obo/PATO_0001875 triangular http://purl.obolibrary.org/obo/PATO_0002006 2-D shape A shape quality inhering in a bearer by virtue of the bearer's having three angles. http://purl.obolibrary.org/obo/PATO_0001877 lanceolate http://purl.obolibrary.org/obo/PATO_0001419 sharp A shape quality inhering in a bearer by virtue of the bearer's being shaped like a lance-head, considerably longer than wide, tapering towards the tip from below the middle; attached at the broad end. http://purl.obolibrary.org/obo/PATO_0001907 botryoidal http://purl.obolibrary.org/obo/PATO_0001925 surface feature shape A surface feature shape quality inhering in a bearer by virtue of the bearer's being like the surface of a compact mass of grapes. http://purl.obolibrary.org/obo/PATO_0001925 surface feature shape http://purl.obolibrary.org/obo/PATO_0000052 shape A surface shape quality inhering in a bearer by virtue of the bearer's shape of features present on its surface or outer shell. http://purl.obolibrary.org/obo/PATO_0001941 yellow green http://purl.obolibrary.org/obo/PATO_0000320 green A color consisting of yellow and green hues. http://purl.obolibrary.org/obo/PATO_0001946 banded http://purl.obolibrary.org/obo/PATO_0001533 multi-colored A color pattern inhering in a bearer by virtue of bearer's exhibiting transverse stripes of one hue or degree of saturation crossing another. http://purl.obolibrary.org/obo/PATO_0001947 netted http://purl.obolibrary.org/obo/PATO_0001533 multi-colored A color pattern inhering in a bearer by virtue of bearer's being covered with reticulated lines of a different hue or degree of saturation. http://purl.obolibrary.org/obo/PATO_0001949 pointleted http://purl.obolibrary.org/obo/PATO_0001419 sharp A shape quality inhering in a bearer by virtue of the bearer's terminating abruptly in a little point. http://purl.obolibrary.org/obo/PATO_0001955 cuneate http://purl.obolibrary.org/obo/PATO_0001875 triangular A shape quality inhering in a bearer by virtue of the bearer's being narrowly triangular, wider at the apex and tapering toward the base. http://purl.obolibrary.org/obo/PATO_0001979 lobed http://purl.obolibrary.org/obo/PATO_0000052 shape A shape quality inhering in a bearer by virtue of the bearer's being partly divided into a determinate number of regions. http://purl.obolibrary.org/obo/PATO_0001981 auriculate http://purl.obolibrary.org/obo/PATO_0000052 shape A shape quality inhering in a bearer by virtue of the bearer's having a shape resembling an ear. http://purl.obolibrary.org/obo/PATO_0001998 conspicuousness http://purl.obolibrary.org/obo/PATO_0000068 qualitative A quality inhering in a bearer by virtue of its visibility. http://purl.obolibrary.org/obo/PATO_0002005 concavity http://purl.obolibrary.org/obo/PATO_0000052 shape Surface shape that refers to the inward or outward curvature of the surface. http://purl.obolibrary.org/obo/PATO_0002006 2-D shape http://purl.obolibrary.org/obo/PATO_0000052 shape A shape that inheres in a 2 dimensional entity, such as a cross section or projection of a 3 dimensional entity. http://purl.obolibrary.org/obo/PATO_0002007 convex 3-D shape http://purl.obolibrary.org/obo/PATO_0002266 3-D shape A complete three dimensional shape in which for every line connecting pair of points on the object is within the object. Or: a shape lacking cavities. Contrast: concave. http://purl.obolibrary.org/obo/PATO_0002008 concave 3-D shape http://purl.obolibrary.org/obo/PATO_0002266 3-D shape A complete three dimensional shape in which there is a line connecting pair of points on the object that lies outside the object. Or: a shape with cavities. Contrast: concave. http://purl.obolibrary.org/obo/PATO_0002012 coating http://purl.obolibrary.org/obo/PATO_0000150 texture A texture quality that exists through a liquid cover on the surface of the bearer. http://purl.obolibrary.org/obo/PATO_0002014 structure, cavities http://purl.obolibrary.org/obo/PATO_0000141 structure A structural quality that inheres in a bearer by virtue of the bearer's containing hollow areas. http://purl.obolibrary.org/obo/PATO_0002020 pale pink http://purl.obolibrary.org/obo/PATO_0000954 pink Pink color having high brightness and low saturation. http://purl.obolibrary.org/obo/PATO_0002021 conical http://purl.obolibrary.org/obo/PATO_0002007 convex 3-D shape A convex 3-D shape quality inhering in a bearer by virtue of the bearer's resembling a cone (a 3-D shape with a round cross section that tapers). http://purl.obolibrary.org/obo/PATO_0002055 increased fragility http://purl.obolibrary.org/obo/PATO_0002305 increased object quality A fragility which is relatively high. http://purl.obolibrary.org/obo/PATO_0002063 columnar http://purl.obolibrary.org/obo/PATO_0000052 shape A shape inhering in a bearer by virtue of the bearer's being elongated and cylindrical. http://purl.obolibrary.org/obo/PATO_0002078 hollow http://purl.obolibrary.org/obo/PATO_0002014 structure, cavities A quality inhering in a bearer by virtue of the bearer's having an empty space or cavity within. http://purl.obolibrary.org/obo/PATO_0002108 papillary http://purl.obolibrary.org/obo/PATO_0000623 exserted A quality inhering in a bearer by virtue of the bearer's resembling small nipple like projection. http://purl.obolibrary.org/obo/PATO_0002198 quality of a substance http://purl.obolibrary.org/obo/PATO_0001018 physical quality A quality inhering in a bearer by virtue of its constitution. http://purl.obolibrary.org/obo/PATO_0002215 falciform http://purl.obolibrary.org/obo/PATO_0000052 shape A shape quality inhering in a bearer by virtue of the bearer's having the shape of a scythe or sickle. http://purl.obolibrary.org/obo/PATO_0002226 subcylindrical http://purl.obolibrary.org/obo/PATO_0001873 cylindrical A cylindrical shape quality inhering in a bearer by virtue of the bearer's being imperfectly cylindrical or approximately cylindrical. http://purl.obolibrary.org/obo/PATO_0002228 acuminate http://purl.obolibrary.org/obo/PATO_0001500 tapered A tapered shape quality inhering in a bearer by virtue of the bearer's tapering gradually to a sharp point. http://purl.obolibrary.org/obo/PATO_0002240 teardrop-shaped http://purl.obolibrary.org/obo/PATO_0002007 convex 3-D shape A convex 3-D shape quality inhering in a bearer by virtue of the bearer's shape resembling falling drop. http://purl.obolibrary.org/obo/PATO_0002266 3-D shape http://purl.obolibrary.org/obo/PATO_0000052 shape A shape that inheres in a 3 dimensional entity. http://purl.obolibrary.org/obo/PATO_0002273 marbled http://purl.obolibrary.org/obo/PATO_0001533 multi-colored Multicolored quality inhering in a bearer by virtue of the bearer's being colored with a variegated pattern resembling marble,. http://purl.obolibrary.org/obo/PATO_0002274 mottled http://purl.obolibrary.org/obo/PATO_0001533 multi-colored Multicolored quality inhering in a bearer by virtue of the bearer's being dappled with spots, patches, or blotches of different colors. http://purl.obolibrary.org/obo/PATO_0002276 barred http://purl.obolibrary.org/obo/PATO_0001533 multi-colored A color pattern inhering in a bearer by virtue of bearer's exhibiting vertical bars of one hue or degree of saturation crossing another. http://purl.obolibrary.org/obo/PATO_0002299 tubular http://purl.obolibrary.org/obo/PATO_0002078 hollow A cylindrical shape that is hollow. http://purl.obolibrary.org/obo/PATO_0002300 increased quality http://purl.obolibrary.org/obo/PATO_0000069 deviation (from_normal) A quality that has a value that is increased compared to normal or average. http://purl.obolibrary.org/obo/PATO_0002305 increased object quality http://purl.obolibrary.org/obo/PATO_0002300 increased quality A quality of an object that has a value that is increased compared to normal or average. http://purl.obolibrary.org/obo/PATO_0002311 fimbriated http://purl.obolibrary.org/obo/PATO_0000052 shape Having a fringe or border of hairlike or fingerlike projections. http://purl.obolibrary.org/obo/PATO_0002318 superelliptic http://purl.obolibrary.org/obo/PATO_0002006 2-D shape A shape constituting a transition between a rectangle and a circle; a closed curve, of which the circle and ellipse are special cases, whose parametric equation is x = a.cos2/rt, y = b.cos2/rt http://purl.obolibrary.org/obo/PATO_0002339 hispid http://purl.obolibrary.org/obo/PATO_0000454 hairy A quality of being covered with stiff or rough hairs. http://purl.obolibrary.org/obo/PATO_0002340 hispidulous http://purl.obolibrary.org/obo/PATO_0002339 hispid A quality of being minutely hispid. http://purl.obolibrary.org/obo/PATO_0002344 arachnose http://purl.obolibrary.org/obo/PATO_0000454 hairy A quality inhering in a bearer by virtue of the bearer's being characterized by fine, entangled hairs giving the appearance of cobweb. http://purl.obolibrary.org/obo/PATO_0002400 fusiform http://purl.obolibrary.org/obo/PATO_0001409 spindle-shaped Having a spindle-like shape that is wide in the middle and tapers at both ends. http://purl.obolibrary.org/obo/PATO_0002411 yellow brown http://purl.obolibrary.org/obo/PATO_0000952 brown A color consisting of yellow and brown hue. http://purl.obolibrary.org/obo/PATO_0002440 ornamentation http://purl.obolibrary.org/obo/PATO_0001925 surface feature shape A surface feature shape quality inhering in a bearer by virtue of the degree of the bearer's highly topographical with ridges, pits, rugosity or other surface structures. http://purl.obolibrary.org/obo/PATO_0002442 unornamented http://purl.obolibrary.org/obo/PATO_0002440 ornamentation A surface feature shape in which the bearer's surface is lacking ridges, pits, rugosity or other surface structures. http://purl.obolibrary.org/obo/PATO_0005002 pear-shaped http://purl.obolibrary.org/obo/PATO_0002007 convex 3-D shape Having the shape of a pear; tapering near the top and bulging toward the base or bottom. From thefreedictionary.com http://purl.obolibrary.org/obo/PATO_0005004 subelliptical http://purl.obolibrary.org/obo/PATO_0002318 superelliptic A shape that is almost an ellipse. http://purl.obolibrary.org/obo/PO_0000003 whole plant http://purl.obolibrary.org/obo/PO_0009011 plant structure A plant structure (PO:0005679) which is a whole organism. http://purl.obolibrary.org/obo/PO_0000017 vascular leaf primordium http://purl.obolibrary.org/obo/PO_0025128 phyllome primordium A phyllome primordium (PO:0025128) that develops from a vascular leaf anlagen (PO:0025431) and is part of a vegetative shoot apex (PO:0025223) and is committed to the development of a vascular leaf (PO:0009025). http://purl.obolibrary.org/obo/PO_0000019 gynoecium primordium http://purl.obolibrary.org/obo/PO_0025477 floral organ primordium A floral structure primordium (PO:0025477) that is committed to the development of a gynoecium (PO:0009062). http://purl.obolibrary.org/obo/PO_0000034 vascular system http://purl.obolibrary.org/obo/PO_0009015 portion of vascular tissue A maximal portion of vascular tissue (PO:0009015) in a whole plant (PO:0000003), collective plant structure (PO:0025497), multi-tissue plant structure (PO:0025496), or cardinal part of multi-tissue plant structure (PO:0025498). http://purl.obolibrary.org/obo/PO_0000036 leaf vascular system http://purl.obolibrary.org/obo/PO_0025206 phyllome vascular system A phyllome vascular system (PO:0025206) that includes the totality of the portions of vascular tissue in their specific arrangement in a vascular leaf (PO:0009025). http://purl.obolibrary.org/obo/PO_0000037 shoot axis apex http://purl.obolibrary.org/obo/PO_0025029 shoot axis A shoot axis (PO:0025029) that is the most distal part of a shoot system (PO:0009006) and has as parts a shoot apical meristem (PO:0020148) and the youngest primordia (PO:0025127). http://purl.obolibrary.org/obo/PO_0000047 leaf lamina epidermis http://purl.obolibrary.org/obo/PO_0006016 leaf epidermis A portion of leaf epidermis (PO:0006016) that is part of a leaf lamina (PO:0020039). http://purl.obolibrary.org/obo/PO_0000048 leaf lamina vascular system http://purl.obolibrary.org/obo/PO_0000034 vascular system A vascular system (PO:0000034) that includes the totality of the portions of vascular tissue in their specific arrangement in a leaf lamina (PO:0020039). http://purl.obolibrary.org/obo/PO_0000051 petiole epidermis http://purl.obolibrary.org/obo/PO_0006016 leaf epidermis A portion of leaf epidermis (PO:0006016) that is part of a petiole (PO:0020038). http://purl.obolibrary.org/obo/PO_0000055 bud http://purl.obolibrary.org/obo/PO_0009006 shoot system An undeveloped shoot system (PO:0009006). http://purl.obolibrary.org/obo/PO_0000112 shoot axis epidermis http://purl.obolibrary.org/obo/PO_0006035 shoot system epidermis A portion of shoot system epidermis (PO:0006035) that is part of a shoot axis (PO:0025029). http://purl.obolibrary.org/obo/PO_0000207 nectary epidermis http://purl.obolibrary.org/obo/PO_0006035 shoot system epidermis A portion of shoot system epidermis (PO:0006035) that is part of a nectary (PO:0009035) . http://purl.obolibrary.org/obo/PO_0000225 peripheral zone http://purl.obolibrary.org/obo/PO_0009013 portion of meristem tissue A portion of meristem tissue (PO:0009013) which is the organogenic region of the meristem, characterized by higher rates of cell division. http://purl.obolibrary.org/obo/PO_0000229 flower meristem http://purl.obolibrary.org/obo/PO_0008028 reproductive shoot apical meristem A portion of reproductive shoot apical meristem tissue (PO:0008028) that gives rise to the floral organs (PO:0025395). http://purl.obolibrary.org/obo/PO_0000282 trichome http://purl.obolibrary.org/obo/UBERON_0001062 anatomical entity A unicellular or multicellular plant structure (PO:0009011) that forms a non-sclerified outgrowth from the epidermis (PO:0005679). http://purl.obolibrary.org/obo/PO_0000349 plant epidermal initial cell http://purl.obolibrary.org/obo/PO_0004011 initial cell An initial cell (PO:0004011) that is part of an plant epidermis (PO:0005679) and gives rise to specialized cells. http://purl.obolibrary.org/obo/PO_0001083 inflorescence development stage http://purl.obolibrary.org/obo/PO_0025530 reproductive shoot system development stage A reproductive shoot system development stage (PO:0025530) that has as primary participant a inflorescence (PO:0009049). http://purl.obolibrary.org/obo/PO_0004010 meristematic cell http://purl.obolibrary.org/obo/PO_0025606 native plant cell A native plant cell (PO:0025606) synthesizing protoplasm and producing new cells by division and with only a primary cell wall. http://purl.obolibrary.org/obo/PO_0004011 initial cell http://purl.obolibrary.org/obo/PO_0004010 meristematic cell A meristematic cell (PO:0004010) that by division gives rise to two cells, one of which remains meristematic, while the other is added to the plant body. http://purl.obolibrary.org/obo/PO_0005020 vascular bundle http://purl.obolibrary.org/obo/PO_0009015 portion of vascular tissue A portion of vascular tissue (PO:0009015) that is a unit strand of the vascular system (PO:0000034) and has as part xylem (PO:0005352) or phloem (PO:0005417). http://purl.obolibrary.org/obo/PO_0005029 root primordium http://purl.obolibrary.org/obo/UBERON_0001062 anatomical entity A primordium (PO:0025127) that develops from a root anlagen (PO:0025433) and is committed to the development of a root (PO:0009005). http://purl.obolibrary.org/obo/PO_0005421 parenchyma http://purl.obolibrary.org/obo/PO_0025059 portion of ground tissue A portion of ground tissue (PO:0025059) composed of polyhedral cells typically with thin, non-lignified cellulosic cell walls and nucleate, living protoplasts. http://purl.obolibrary.org/obo/PO_0005597 cambium http://purl.obolibrary.org/obo/PO_0020145 lateral meristem A lateral meristem (PO:0020145) that has as part a single layer of cambial initial cells (PO:0000295) and their derivatives, arranged orderly in radial files. http://purl.obolibrary.org/obo/PO_0005656 portion of secretory tissue http://purl.obolibrary.org/obo/PO_0009007 portion of plant tissue A portion of plant tissue (PO:0009007) that form specialized structures producing a secretion. http://purl.obolibrary.org/obo/PO_0005679 plant epidermis http://purl.obolibrary.org/obo/UBERON_0001062 anatomical entity A portion of plant tissue (PO:0009007) composed of plant epidermal cells (PO:0004013) that develops from the protoderm (PO:0006210) and covers the surface of a plant structure (PO:0009011). http://purl.obolibrary.org/obo/PO_0006001 phyllome http://purl.obolibrary.org/obo/UBERON_0001062 anatomical entity A lateral plant organ (PO:0009008) produced by a shoot apical meristem (PO:0020148). http://purl.obolibrary.org/obo/PO_0006003 scale leaf http://purl.obolibrary.org/obo/PO_0006001 phyllome A phyllome that is reduced in size relative to a vascular leaf on the same plant and is often associated with a perennating or dormant bud or a vegetatively propagating organ such as a rhizome. http://purl.obolibrary.org/obo/PO_0006016 leaf epidermis http://purl.obolibrary.org/obo/PO_0025157 phyllome epidermis A portion of phyllome epidermis (PO:0025157) that is part of a leaf (PO:0025034). http://purl.obolibrary.org/obo/PO_0006018 adaxial leaf epidermis http://purl.obolibrary.org/obo/PO_0006016 leaf epidermis A portion of leaf epidermis (PO:0006016) that covers the adaxial/upper surface of a leaf. http://purl.obolibrary.org/obo/PO_0006019 abaxial leaf epidermis http://purl.obolibrary.org/obo/PO_0006016 leaf epidermis A portion of leaf epidermis (PO:0006016) that covers the abaxial/lower surface of a leaf. http://purl.obolibrary.org/obo/PO_0006035 shoot system epidermis http://purl.obolibrary.org/obo/PO_0005679 plant epidermis A portion of plant epidermis (PO:0005679) that is part of a shoot system (PO:0009006) and arises from the meristem L1 layer (PO:0009020). http://purl.obolibrary.org/obo/PO_0006036 root epidermis http://purl.obolibrary.org/obo/PO_0005679 plant epidermis A portion of plant epidermis (PO:0005679) that is part of a root (PO:0009005). http://purl.obolibrary.org/obo/PO_0006079 shoot system meristem http://purl.obolibrary.org/obo/PO_0009013 portion of meristem tissue A portion of meristem tissue (PO:0009013) that is part of a shoot system (PO:0009006). http://purl.obolibrary.org/obo/PO_0006210 protoderm http://purl.obolibrary.org/obo/PO_0009013 portion of meristem tissue A portion of meristem tissue (PO:0009013) that is the outer layer of an apical meristem (PO:0020144), or the outer layer of a plant embryo proper (PO:0000001), and gives rise to a portion of epidermis (PO:0005679). http://purl.obolibrary.org/obo/PO_0006504 leaf trichome http://purl.obolibrary.org/obo/PO_0025186 phyllome trichome A phyllome trichome that is part of a leaf epidermis. http://purl.obolibrary.org/obo/PO_0007033 whole plant development stage http://purl.obolibrary.org/obo/PO_0009012 plant structure development stage A plant structure development stage (PO:0009012) that has as primary participant a whole plant (PO:0000003). http://purl.obolibrary.org/obo/PO_0008016 vegetative shoot apical meristem http://purl.obolibrary.org/obo/PO_0020148 shoot apical meristem A shoot apical meristem (PO:0020148) that gives rise to the apical growth of vegetative tissues and organs. http://purl.obolibrary.org/obo/PO_0008028 reproductive shoot apical meristem http://purl.obolibrary.org/obo/PO_0020148 shoot apical meristem A shoot apical meristem (PO:0020148) that gives rise to the apical growth of reproductive tissues and organs. http://purl.obolibrary.org/obo/PO_0008039 stem base http://purl.obolibrary.org/obo/PO_0025001 cardinal organ part The basal part of stem. http://purl.obolibrary.org/obo/PO_0009001 fruit http://purl.obolibrary.org/obo/UBERON_0001062 anatomical entity A multi-tissue plant structure (PO:0025496) that develops from a gynoecium (PO:0009062), or a single carpel (PO:0009030), and at maturity may have as parts one or more seeds (PO:0009010). http://purl.obolibrary.org/obo/PO_0009002 plant cell http://purl.obolibrary.org/obo/PO_0009011 plant structure A cell which is a plant structure (PO:0009011). http://purl.obolibrary.org/obo/PO_0009005 root http://purl.obolibrary.org/obo/UBERON_0001062 anatomical entity A plant axis (PO:0025004) that lacks shoot axis nodes (PO:0005004) and usually grows indeterminately. http://purl.obolibrary.org/obo/PO_0009006 shoot system http://purl.obolibrary.org/obo/PO_0025007 collective plant organ structure A collective plant organ structure (PO:0025007) that produces shoot-borne portions of meristem tissue (PO:0009013) and the plant structures (PO:0009011) that arise from them. http://purl.obolibrary.org/obo/PO_0009007 portion of plant tissue http://purl.obolibrary.org/obo/PO_0009011 plant structure A plant structure (PO:0009011) that consists predominantly of similarly specialized plant cells (PO:0009002) of one or more types. http://purl.obolibrary.org/obo/PO_0009008 plant organ http://purl.obolibrary.org/obo/PO_0025496 multi-tissue plant structure A multi-tissue plant structure (PO:0025496) that is a functional unit, is a proper part of a whole plant (PO:0000003), and includes portions of plant tissue (PO:0009007) of at least two different types that derive from a common developmental path. http://purl.obolibrary.org/obo/PO_0009011 plant structure http://purl.obolibrary.org/obo/PO_0025131 plant anatomical entity A plant anatomical entity (PO:0025131) that is, or was, part of a plant, or was derived from a part of a plant. http://purl.obolibrary.org/obo/PO_0009012 plant structure development stage http://purl.obolibrary.org/obo/BFO_0000015 process A stage in the life of a plant structure (PO:0009011) during which the plant structure undergoes developmental processes. http://purl.obolibrary.org/obo/PO_0009013 portion of meristem tissue http://purl.obolibrary.org/obo/PO_0009007 portion of plant tissue A portion of plant tissue (PO:0009007) in which plant cells (PO:0009002) have retained their embryonic characteristics, or have reverted to them secondarily, and that divide to produce new cells that can undergo differentiation to form mature tissues, i.e. they have a capacity for morphogenesis and growth. http://purl.obolibrary.org/obo/PO_0009015 portion of vascular tissue http://purl.obolibrary.org/obo/PO_0009007 portion of plant tissue A portion of plant tissue (PO:0009007) that has as part one or more tracheary elements (PO:0000290) or sieve elements (PO:0025406). http://purl.obolibrary.org/obo/PO_0009020 meristem L1 layer http://purl.obolibrary.org/obo/PO_0009013 portion of meristem tissue A portion of meristem tissue (PO:0009013) that is the outermost layer of a shoot apical meristem (PO:0020148) and gives rise to a shoot system epidermis (PO:0006035). http://purl.obolibrary.org/obo/PO_0009023 leaf axil http://purl.obolibrary.org/obo/PO_0025224 axil An axil that is the space between a shoot axis and a leaf that branches from the shoot axis. http://purl.obolibrary.org/obo/PO_0009025 vascular leaf http://purl.obolibrary.org/obo/PO_0025034 leaf A leaf (PO:0025034) in a vascular plant. http://purl.obolibrary.org/obo/PO_0009035 nectary http://purl.obolibrary.org/obo/PO_0005656 portion of secretory tissue A portion of secretory tissue (PO:0005656) which is a multicellular glandular structure secreting a liquid containing organic substances, including sugars. http://purl.obolibrary.org/obo/PO_0009046 flower http://purl.obolibrary.org/obo/UBERON_0001062 anatomical entity A determinate reproductive shoot system (PO:0025082) that has as part at least one carpel (PO:0009030) or at least one stamen (PO:0009029) and does not contain any other determinate shoot system (PO:0009006) as a part. http://purl.obolibrary.org/obo/PO_0009047 stem http://purl.obolibrary.org/obo/PO_0025029 shoot axis A shoot axis (PO:0025029) that is the primary axis of a plant. http://purl.obolibrary.org/obo/PO_0009049 inflorescence http://purl.obolibrary.org/obo/UBERON_0001062 anatomical entity A reproductive shoot system (PO:0025082) that has as parts all of the shoot axes (PO:0025029) and flowers (PO:0009046; must have two or more) distal to the most distal leaf (PO:0009025). http://purl.obolibrary.org/obo/PO_0009062 gynoecium http://purl.obolibrary.org/obo/UBERON_0001062 anatomical entity A collective phyllome structure (PO:0025023) composed all of the carpels (PO:0009030) in a flower (PO:0009046). http://purl.obolibrary.org/obo/PO_0020038 petiole http://purl.obolibrary.org/obo/PO_0025066 stalk A stalk (PO:0025066) of a vascular leaf (PO:0009025). http://purl.obolibrary.org/obo/PO_0020039 leaf lamina http://purl.obolibrary.org/obo/PO_0025396 phyllome lamina A phyllome lamina (PO:0025396) that is the part of a leaf (PO:0025034) exclusive of the petiole (PO:0020038) or leaf sheath (PO:0020104), if either is present. http://purl.obolibrary.org/obo/PO_0020043 compound leaf http://purl.obolibrary.org/obo/PO_0009025 vascular leaf A leaf having two or more distinct leaflets that are evident as such from early in development. http://purl.obolibrary.org/obo/PO_0020049 leaflet http://purl.obolibrary.org/obo/PO_0025001 cardinal organ part A cardinal organ part (PO:0025001) that is one of the ultimate segments of a compound leaf (PO:0020043). http://purl.obolibrary.org/obo/PO_0020054 bud scale leaf http://purl.obolibrary.org/obo/PO_0006003 scale leaf A scale leaf that surrounds a dormant or perennating bud. http://purl.obolibrary.org/obo/PO_0020128 leaf margin http://purl.obolibrary.org/obo/PO_0025018 phyllome margin A phyllome margin (PO:0025018) that is part of a leaf (PO:0025034). http://purl.obolibrary.org/obo/PO_0020138 leaf vein http://purl.obolibrary.org/obo/PO_0025348 phyllome lamina vein A phyllome lamina vein (PO:0025348) that is part of a leaf lamina vascular system (PO:0000048). http://purl.obolibrary.org/obo/PO_0020139 leaf midvein http://purl.obolibrary.org/obo/PO_0025413 primary leaf vein A primary leaf vein (PO:0025413) that is the central vein of a vascular leaf (PO:0009025). http://purl.obolibrary.org/obo/PO_0020140 secondary leaf vein http://purl.obolibrary.org/obo/PO_0020138 leaf vein A leaf lamina vein (PO:0020138) arising from a primary leaf vein (PO:0025413). http://purl.obolibrary.org/obo/PO_0020144 apical meristem http://purl.obolibrary.org/obo/PO_0009013 portion of meristem tissue A maximal portion of meristem tissue (PO:0009013) located at a shoot apex (PO:0000037) or root tip (PO:0000025). http://purl.obolibrary.org/obo/PO_0020145 lateral meristem http://purl.obolibrary.org/obo/PO_0009013 portion of meristem tissue A portion of meristem (PO:0009013) tissue located parallel to the sides of a shoot axis (PO:0025029) or root (PO:0009005) that participates in lateral growth. http://purl.obolibrary.org/obo/PO_0020148 shoot apical meristem http://purl.obolibrary.org/obo/PO_0020144 apical meristem A shoot system meristem (PO:0006079) formed at the apex of the shoot axis (PO:0025029), including those originating from an axillary bud meristem (PO:0000232). http://purl.obolibrary.org/obo/PO_0025001 cardinal organ part http://purl.obolibrary.org/obo/PO_0025498 cardinal part of multi-tissue plant structure A cardinal part of multi-tissue plant structure (PO:0025498) that is a proper part of a plant organ (PO:0009008) and includes portions of plant tissue (PO:0009007) of at least two different types. http://purl.obolibrary.org/obo/PO_0025004 plant axis http://purl.obolibrary.org/obo/PO_0009008 plant organ An axial plant organ (PO:0009008). http://purl.obolibrary.org/obo/PO_0025005 plant organ margin http://purl.obolibrary.org/obo/PO_0025001 cardinal organ part A cardinal organ part (PO:0025001) that is the edge of a plant organ (PO:0009008) and the area immediately internally adjacent to it. http://purl.obolibrary.org/obo/PO_0025007 collective plant organ structure http://purl.obolibrary.org/obo/PO_0025497 collective plant structure A collective plant structure (PO:0025497) that is a proper part of a whole plant (PO:0000003), and is composed of two or more adjacent plant organs (PO:0009008) and the associated portions of plant tissue (PO:0009007). http://purl.obolibrary.org/obo/PO_0025018 phyllome margin http://purl.obolibrary.org/obo/PO_0025005 plant organ margin A plant organ margin (PO:0025005) that is part of a phyllome lamina (PO:0025396). http://purl.obolibrary.org/obo/PO_0025023 collective phyllome structure http://purl.obolibrary.org/obo/PO_0025007 collective plant organ structure A collective plant organ structure (PO:0025007) that consists of two or more phyllomes (PO:0006001) originating from the same node or from one or more adjacent nodes with compressed shoot internodes (PO:0005005). http://purl.obolibrary.org/obo/PO_0025025 root system http://purl.obolibrary.org/obo/PO_0025007 collective plant organ structure A collective plant organ structure (PO:0025007) that produces root meristems (PO:0006085), the plant structures (PO:0009011) that arise from them and the parts thereof. http://purl.obolibrary.org/obo/PO_0025029 shoot axis http://purl.obolibrary.org/obo/PO_0025004 plant axis A plant axis (PO:0025004) that is part of a shoot system (PO:0009006). http://purl.obolibrary.org/obo/PO_0025034 leaf http://purl.obolibrary.org/obo/PO_0006001 phyllome A phyllome (PO:0006001) that is not associated with a reproductive structure. http://purl.obolibrary.org/obo/PO_0025059 portion of ground tissue http://purl.obolibrary.org/obo/UBERON_0001062 anatomical entity Any portion of plant tissue (PO:0009007) other than epidermis (PO:0005679) or vascular tissue (PO:0009015). http://purl.obolibrary.org/obo/PO_0025060 lamina http://purl.obolibrary.org/obo/PO_0025498 cardinal part of multi-tissue plant structure A cardinal part of multi-tissue plant structure (PO:0025498) that is thin and flat. http://purl.obolibrary.org/obo/PO_0025066 stalk http://purl.obolibrary.org/obo/PO_0025001 cardinal organ part A cardinal organ part (PO:0025001) that is elongated and sub-cylindrical to cylindrical and supports another cardinal organ part. http://purl.obolibrary.org/obo/PO_0025073 branch http://purl.obolibrary.org/obo/PO_0025029 shoot axis A shoot axis (PO:00025029) that develops from an axillary bud meristem (PO:0000232) or from equal divisions of a meristematic apical cell (PO:0030007). http://purl.obolibrary.org/obo/PO_0025082 reproductive shoot system http://purl.obolibrary.org/obo/PO_0009006 shoot system A shoot system (PO:0009006) in the sporophytic phase that has as part at least one sporangium (PO:0025094). http://purl.obolibrary.org/obo/PO_0025092 dehiscence zone http://purl.obolibrary.org/obo/PO_0009007 portion of plant tissue A portion of plant tissue (PO:0009007) that is part of a plant structure and consists of a narrow band of cells that undergoes dehiscence upon maturation of the structure. http://purl.obolibrary.org/obo/PO_0025117 plant anatomical space http://purl.obolibrary.org/obo/PO_0025131 plant anatomical entity An anatomical space that is part of a plant. http://purl.obolibrary.org/obo/PO_0025127 primordium http://purl.obolibrary.org/obo/PO_0009013 portion of meristem tissue A portion of meristem tissue (PO:0009013) that has as parts protoderm (PO:0006210) and sub-epidermal meristematic tissue and is committed to the development of a particular plant structure (PO:0009011). http://purl.obolibrary.org/obo/PO_0025128 phyllome primordium http://purl.obolibrary.org/obo/UBERON_0001062 anatomical entity A primordium (PO:0025127) that develops from a phyllome anlagen (PO:0025430) and is part of a shoot apex (PO:0000037) and is committed to the development of a phyllome (PO:0006001). http://purl.obolibrary.org/obo/PO_0025129 petiole lamina http://purl.obolibrary.org/obo/PO_0025396 phyllome lamina A lamina (PO:0025060) that is part of a petiole (PO:0020038). http://purl.obolibrary.org/obo/PO_0025131 plant anatomical entity http://purl.obolibrary.org/obo/BFO_0000040 material entity An anatomical entity that is or was part of a plant. http://purl.obolibrary.org/obo/PO_0025157 phyllome epidermis http://purl.obolibrary.org/obo/PO_0006035 shoot system epidermis A portion of shoot system epidermis (PO:0006035) that is part of a phyllome (PO:0006001). http://purl.obolibrary.org/obo/PO_0025178 stem epidermis http://purl.obolibrary.org/obo/PO_0000112 shoot axis epidermis A portion of shoot axis epidermis (PO:0000112) that is part of a stem (PO:0009047). http://purl.obolibrary.org/obo/PO_0025179 branch epidermis http://purl.obolibrary.org/obo/PO_0000112 shoot axis epidermis A portion of shoot axis epidermis (PO:0006035) that is part of a branch (PO:0025073). http://purl.obolibrary.org/obo/PO_0025186 phyllome trichome http://purl.obolibrary.org/obo/PO_0000282 trichome A trichome that is part of a phyllome epidermis. http://purl.obolibrary.org/obo/PO_0025205 shoot system vascular system http://purl.obolibrary.org/obo/PO_0000034 vascular system A vascular system (PO:0000034) that is part of a shoot system (PO:0009006). http://purl.obolibrary.org/obo/PO_0025206 phyllome vascular system http://purl.obolibrary.org/obo/PO_0000034 vascular system A vascular system (PO:0000034) that includes the totality of the portions of vascular tissue in their specific arrangement in a phyllome (PO:0006001). http://purl.obolibrary.org/obo/PO_0025222 reproductive shoot apex http://purl.obolibrary.org/obo/PO_0000037 shoot axis apex A shoot apex that has as part a reproductive shoot apical meristem. http://purl.obolibrary.org/obo/PO_0025223 vegetative shoot apex http://purl.obolibrary.org/obo/PO_0000037 shoot axis apex A shoot apex PO:0000037) that has as part a vegetative shoot apical meristem (PO:0008016). http://purl.obolibrary.org/obo/PO_0025224 axil http://purl.obolibrary.org/obo/PO_0025117 plant anatomical space A plant anatomical space that is the space between a shoot axis and a leaf, bract, or branch that branches from the shoot axis. http://purl.obolibrary.org/obo/PO_0025337 life of whole plant stage http://purl.obolibrary.org/obo/PO_0007033 whole plant development stage A maximal whole plant development stage. http://purl.obolibrary.org/obo/PO_0025338 collective plant organ structure development stage http://purl.obolibrary.org/obo/PO_0009012 plant structure development stage A plant structure development stage (PO:0009012) that has as primary participant a collective plant structure (PO:0025497). http://purl.obolibrary.org/obo/PO_0025348 phyllome lamina vein http://purl.obolibrary.org/obo/PO_0005020 vascular bundle A vascular bundle (PO:0005020) that is part of a phyllome lamina (PO:0025396). http://purl.obolibrary.org/obo/PO_0025395 floral organ http://purl.obolibrary.org/obo/PO_0009008 plant organ A plant organ (PO:0009008) that is part of a flower (PO:0009046). http://purl.obolibrary.org/obo/PO_0025396 phyllome lamina http://purl.obolibrary.org/obo/PO_0025513 plant organ lamina A plant organ lamina (PO:0025513) that is part of a phyllome (PO:0006001). http://purl.obolibrary.org/obo/PO_0025413 primary leaf vein http://purl.obolibrary.org/obo/PO_0020138 leaf vein A leaf lamina vein (PO:0020138) that connects directly to a petiole vascular system (PO:0000052) or a shoot axis vascular system (PO:0000039). http://purl.obolibrary.org/obo/PO_0025430 phyllome anlagen http://purl.obolibrary.org/obo/PO_0009013 portion of meristem tissue A portion of meristem tissue (PO:0009013) that is part of a peripheral zone (PO:0000225) of a shoot apical meristem (PO:0020148) and will give rise to a phyllome primordium (PO:0025128). http://purl.obolibrary.org/obo/PO_0025431 vascular leaf anlagen http://purl.obolibrary.org/obo/PO_0025430 phyllome anlagen A phyllome anlagen (PO:0025430) that will give rise to a vascular leaf primordium (PO:0000017) and is part of a peripheral zone (PO:0000225) of a shoot apical meristem (PO:0020148). http://purl.obolibrary.org/obo/PO_0025433 root anlagen http://purl.obolibrary.org/obo/PO_0009013 portion of meristem tissue A portion of meristem tissue (PO:0009013) that is committed to the development of a root primordium (PO:0005029). http://purl.obolibrary.org/obo/PO_0025477 floral organ primordium http://purl.obolibrary.org/obo/PO_0025127 primordium A primordium (PO:0025127) that is committed to the development of a floral organ (PO:0025395) and is part of a reproductive shoot apex (PO:0025222). http://purl.obolibrary.org/obo/PO_0025496 multi-tissue plant structure http://purl.obolibrary.org/obo/PO_0009011 plant structure A plant structure (PO:0009011) that has as parts two or more portions of plant tissue (PO:0009007) of at least two different types and which through specific morphogenetic processes forms a single structural unit demarcated by primarily bona-fide boundaries from other structural units of different types. http://purl.obolibrary.org/obo/PO_0025497 collective plant structure http://purl.obolibrary.org/obo/PO_0009011 plant structure A plant structure (PO:0009011) that is a proper part of a whole plant (PO:0000003) and includes two or more adjacent plant organs (PO:0009008) or adjacent cardinal organ parts (PO:0025001), along with any associated portions of plant tissue (PO:0009007). http://purl.obolibrary.org/obo/PO_0025498 cardinal part of multi-tissue plant structure http://purl.obolibrary.org/obo/PO_0009011 plant structure A plant structure (PO:0009011) that is a proper part of a multi-tissue plant structure (PO:0025496) and includes portions of plant tissues (PO:0009007) of at least two different types. http://purl.obolibrary.org/obo/PO_0025513 plant organ lamina http://purl.obolibrary.org/obo/PO_0025060 lamina A lamina (PO:0025060) that is part of a plant organ (PO:0009008). http://purl.obolibrary.org/obo/PO_0025527 shoot system development stage http://purl.obolibrary.org/obo/PO_0025338 collective plant organ structure development stage A collective plant organ structure development stage (PO:0025338) that begins with the onset of the plant organ development stage (PO:0025339) and ends with either gametophyte senescent stage (PO:0025343) or sporophyte senescent stage (PO:0007017) or death. http://purl.obolibrary.org/obo/PO_0025528 bud development stage http://purl.obolibrary.org/obo/PO_0025527 shoot system development stage A shoot system development stage (PO:0025527) that has as primary participant a bud (PO:0009006). http://purl.obolibrary.org/obo/PO_0025530 reproductive shoot system development stage http://purl.obolibrary.org/obo/PO_0025527 shoot system development stage A shoot system development stage (PO:0025527) that has as primary participant a reproductive shoot system (PO:0025082). http://purl.obolibrary.org/obo/PO_0025594 ground meristem http://purl.obolibrary.org/obo/PO_0009013 portion of meristem tissue A portion of meristem tissue (PO:0009013) that gives rise to a portion of ground tissue (PO:0025059). http://purl.obolibrary.org/obo/PO_0025606 native plant cell http://purl.obolibrary.org/obo/PO_0009002 plant cell A plant cell (PO:0009002) that is either part of a multicellular whole plant (PO:0000003) 'in vivo' or a unicellular organism 'in natura' (i.e. part of a natural environment). http://purl.obolibrary.org/obo/PO_0028002 sporophyte development stage http://purl.obolibrary.org/obo/PO_0007033 whole plant development stage A whole plant development stage (PO:0007033) that has as primary participant a whole plant (PO:0000003) during the interval between fertilization (or apogamy) and death. http://purl.obolibrary.org/obo/BFO_0000003 occurrent http://purl.obolibrary.org/obo/BFO_0000001 entity An entity that has temporal parts and that happens, unfolds or develops through time. http://purl.obolibrary.org/obo/BFO_0000004 independent continuant http://purl.obolibrary.org/obo/BFO_0000002 continuant b is an independent continuant = Def. b is a continuant which is such that there is no c and no t such that b s-depends_on c at t. (axiom label in BFO2 Reference: [017-002]) http://purl.obolibrary.org/obo/BFO_0000015 process http://purl.obolibrary.org/obo/BFO_0000003 occurrent p is a process = Def. p is an occurrent that has temporal proper parts and for some time t, p s-depends_on some material entity at t. (axiom label in BFO2 Reference: [083-003]) http://purl.obolibrary.org/obo/BFO_0000017 realizable http://purl.obolibrary.org/obo/BFO_0000020 characteristic A specifically dependent continuant that inheres in continuant entities and are not exhibited in full at every time in which it inheres in an entity or group of entities. The exhibition or actualization of a realizable entity is a particular manifestation, functioning or process that occurs under certain circumstances. http://purl.obolibrary.org/obo/BFO_0000020 characteristic http://purl.obolibrary.org/obo/BFO_0000002 continuant b is a specifically dependent continuant = Def. b is a continuant & there is some independent continuant c which is not a spatial region and which is such that b s-depends_on c at every time t during the course of b’s existence. (axiom label in BFO2 Reference: [050-003]) http://purl.obolibrary.org/obo/BFO_0000023 role http://purl.obolibrary.org/obo/BFO_0000017 realizable A realizable entity the manifestation of which brings about some result or end that is not essential to a continuant in virtue of the kind of thing that it is but that can be served or participated in by that kind of continuant in some kinds of natural, social or institutional contexts. http://purl.obolibrary.org/obo/BFO_0000040 material entity http://purl.obolibrary.org/obo/BFO_0000004 independent continuant An independent continuant that is spatially extended whose identity is independent of that of other entities and can be maintained through time. http://purl.obolibrary.org/obo/OBI_0100026 organism http://purl.obolibrary.org/obo/BFO_0000040 material entity A material entity that is an individual living system, such as animal, plant, bacteria or virus, that is capable of replicating or reproducing, growth and maintenance in the right environment. An organism may be unicellular or made up, like humans, of many billions of cells divided into specialized tissues and organs. http://purl.obolibrary.org/obo/PATO_0000011 age http://purl.obolibrary.org/obo/PATO_0000165 time A time quality inhering in a bearer by virtue of how long the bearer has existed. http://purl.obolibrary.org/obo/PATO_0000122 length http://purl.obolibrary.org/obo/PATO_0001708 1-D extent A 1-D extent quality which is equal to the distance between two points. http://purl.obolibrary.org/obo/PATO_0001546 quality of a solid http://purl.obolibrary.org/obo/PATO_0002198 quality of a substance A physical quality inhering in a bearer by virtue of the bearer's exhibiting the physical characteristics of an entity characterized by particles arranged such that their shape and volume are relatively stable. http://purl.obolibrary.org/obo/PATO_0001995 organismal quality http://purl.obolibrary.org/obo/PATO_0001241 physical object quality A quality that inheres in an entire organism or part of an organism. http://purl.obolibrary.org/obo/FLOPO_0900042 succulent http://purl.obolibrary.org/obo/GALLONT_0000007 internal quality A gall trait in which the gall parenchyma is juicy, as in the tissue of some fruits (for example grapes, starfruit). http://purl.obolibrary.org/obo/UBERON_0001062 anatomical entity http://purl.obolibrary.org/obo/BFO_0000004 independent continuant Biological entity that is either an individual member of a biological species or constitutes the structural organization of an individual member of a biological species. http://purl.obolibrary.org/obo/PATO_0070060 quality of interaction of a substance with electromagnetic radiation http://purl.obolibrary.org/obo/PATO_0002198 quality of a substance A quality of a substance on which or through which electromagnetic radiation impinges or traverses with respect to radiation. This substance quality changes the quality of the incident radiation with respect to any of: intensity, direction, scatter and wavelength. http://purl.obolibrary.org/obo/GALLONT_0000025 plant gall http://purl.obolibrary.org/obo/PO_0025496 multi-tissue plant structure A multi-tissue plant structure (PO:0025496) that develops in response to a biotic stress (PSO:0000004). http://purl.obolibrary.org/obo/GO_0003674 gene product or complex activity http://purl.obolibrary.org/obo/BFO_0000015 process A molecular process that can be carried out by the action of a single macromolecular machine, usually via direct physical interactions with other molecular entities. Function in this sense denotes an action, or activity, that a gene product (or a complex) performs. http://purl.obolibrary.org/obo/GO_0003824 catalytic activity http://purl.obolibrary.org/obo/GO_0003674 gene product or complex activity Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. http://purl.obolibrary.org/obo/GO_0008150 biological process http://purl.obolibrary.org/obo/BFO_0000015 process A biological process is the execution of a genetically-encoded biological module or program. It consists of all the steps required to achieve the specific biological objective of the module. A biological process is accomplished by a particular set of molecular functions carried out by specific gene products (or macromolecular complexes), often in a highly regulated manner and in a particular temporal sequence. http://purl.obolibrary.org/obo/GO_0016301 kinase activity http://purl.obolibrary.org/obo/GO_0016772 transferase activity, transferring phosphorus-containing groups Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule. http://purl.obolibrary.org/obo/GO_0016740 transferase activity http://purl.obolibrary.org/obo/GO_0003824 catalytic activity Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2. http://purl.obolibrary.org/obo/PO_0030121 capitulum inflorescence http://purl.obolibrary.org/obo/PO_0009049 inflorescence An inflorescence (PO:0009049) with a monopodial growth habit, which at flowering stage (PO:0007616) is composed of a radially-enlarged, determinate, first order inflorescence axis (PO:0025104) with sessile flowers (PO:0009046). http://purl.obolibrary.org/obo/GALLONT_0000048 erineum http://purl.obolibrary.org/obo/GALLONT_0000050 zoocecidium A plant gall that is induced by mites (Acariformes) on leaves and which consists of an area of leaf epidermis that has increased hairiness. http://purl.obolibrary.org/obo/GO_0016772 transferase activity, transferring phosphorus-containing groups http://purl.obolibrary.org/obo/GO_0016740 transferase activity Catalysis of the transfer of a phosphorus-containing group from one compound (donor) to another (acceptor). http://purl.obolibrary.org/obo/GALLONT_0000050 zoocecidium http://purl.obolibrary.org/obo/GALLONT_0000025 plant gall A plant gall that is induced by an animal http://purl.obolibrary.org/obo/PO_0030119 catkin inflorescence http://purl.obolibrary.org/obo/PO_0009049 inflorescence An inflorescence (PO:0009049) with a monopodial growth habit, which at flowering stage (PO:0007616) is composed of indeterminate, first order inflorescence axes (PO:0025104) and sessile, unisexual flowers (PO:0009046) that are each subtended by conspicuous inflorescence bracts (PO:0009054). http://purl.obolibrary.org/obo/GALLONT_0000049 plant gall cluster http://purl.obolibrary.org/obo/PO_0025496 multi-tissue plant structure A multi-tissue plant structure (PO:0025496) that has as parts multiple individual plant galls (GALLONT:0000025) in ane aggregation. http://purl.obolibrary.org/obo/GALLONT_0000051 plant gall abscission zone http://purl.obolibrary.org/obo/http://purl.obolibrary.org/obo/PO_0000146 abscission zone An abscission zone (PO:0000146) that is part of a plant gall. http://purl.obolibrary.org/obo/GALLONT_0000053 plant gall dehiscence zone http://purl.obolibrary.org/obo/PO_0025092 dehiscence zone A dehiscence zone that is part of a plant gall. This zone corresponds to the site of rupture in a plant gall. http://purl.obolibrary.org/obo/NCIT_C48440 solitary http://purl.obolibrary.org/obo/PATO_0000060 spatial pattern Not accompanied by another or others; exclusive of anyone or anything else. http://purl.obolibrary.org/obo/PATO_0040022 flared http://purl.obolibrary.org/obo/PATO_0000052 shape A shape quality inhering in a bearer by virtue of the bearer being expanded laterally and or opened outward in shape. http://purl.obolibrary.org/obo/GALLONT_0000042 Quercus sect. Quercus http://purl.obolibrary.org/obo/NCBITaxon_3511 Quercus http://purl.obolibrary.org/obo/GALLONT_0000046 Aceria triplacis http://purl.obolibrary.org/obo/NCBITaxon_109362 Aceria http://purl.obolibrary.org/obo/PATO_0000068 qualitative http://purl.obolibrary.org/obo/PATO_0000001 quality http://purl.obolibrary.org/obo/GALLONT_0000040 nutritive tissue http://purl.obolibrary.org/obo/PO_0009007 portion of plant tissue http://purl.obolibrary.org/obo/http://purl.obolibrary.org/obo/PO_0000146 abscission zone http://purl.obolibrary.org/obo/PO_0009007 portion of plant tissue http://purl.obolibrary.org/obo/BFO_0000008 temporal region http://purl.obolibrary.org/obo/BFO_0000003 occurrent http://purl.obolibrary.org/obo/BFO_0000038 one-dimensional temporal region http://purl.obolibrary.org/obo/BFO_0000008 temporal region http://purl.obolibrary.org/obo/BFO_0000034 function http://purl.obolibrary.org/obo/BFO_0000016 disposition http://purl.obolibrary.org/obo/BFO_0000016 disposition http://purl.obolibrary.org/obo/BFO_0000017 realizable http://purl.obolibrary.org/obo/BFO_0000019 quality http://purl.obolibrary.org/obo/BFO_0000020 characteristic http://purl.obolibrary.org/obo/ENVO_03000096 season http://purl.obolibrary.org/obo/BFO_0000038 one-dimensional temporal region http://purl.obolibrary.org/obo/NCBITaxon_1 root http://purl.obolibrary.org/obo/OBI_0100026 organism http://purl.obolibrary.org/obo/CARO_0000048 gonochoristic organism http://purl.obolibrary.org/obo/OBI_0100026 organism http://purl.obolibrary.org/obo/CARO_0000030 asexual organism http://purl.obolibrary.org/obo/OBI_0100026 organism http://purl.obolibrary.org/obo/GALLONT_0000043 Disholcaspis quercusglobulus (sexgen) http://purl.obolibrary.org/obo/CARO_0000048 gonochoristic organism http://purl.obolibrary.org/obo/GALLONT_0000044 Disholcaspis quercusglobulus (agamic) http://purl.obolibrary.org/obo/CARO_0000030 asexual organism http://purl.obolibrary.org/obo/NCBITaxon_131567 cellular organisms http://purl.obolibrary.org/obo/NCBITaxon_1 root http://purl.obolibrary.org/obo/NCBITaxon_88770 Panarthropoda http://purl.obolibrary.org/obo/NCBITaxon_1206794 Ecdysozoa http://purl.obolibrary.org/obo/NCBITaxon_2759 Eukaryota http://purl.obolibrary.org/obo/NCBITaxon_131567 cellular organisms http://purl.obolibrary.org/obo/NCBITaxon_6960 Hexapoda http://purl.obolibrary.org/obo/NCBITaxon_197562 Pancrustacea http://purl.obolibrary.org/obo/NCBITaxon_197562 Pancrustacea http://purl.obolibrary.org/obo/NCBITaxon_197563 Mandibulata http://purl.obolibrary.org/obo/NCBITaxon_33090 Viridiplantae http://purl.obolibrary.org/obo/NCBITaxon_2759 Eukaryota http://purl.obolibrary.org/obo/NCBITaxon_33154 Opisthokonta http://purl.obolibrary.org/obo/NCBITaxon_2759 Eukaryota http://purl.obolibrary.org/obo/NCBITaxon_3503 Fagaceae http://purl.obolibrary.org/obo/NCBITaxon_33090 Viridiplantae http://purl.obolibrary.org/obo/NCBITaxon_33208 Metazoa http://purl.obolibrary.org/obo/NCBITaxon_33154 Opisthokonta http://purl.obolibrary.org/obo/NCBITaxon_6072 Eumetazoa http://purl.obolibrary.org/obo/NCBITaxon_33208 Metazoa http://purl.obolibrary.org/obo/NCBITaxon_33317 Protostomia http://purl.obolibrary.org/obo/NCBITaxon_33213 Bilateria http://purl.obolibrary.org/obo/NCBITaxon_1206794 Ecdysozoa http://purl.obolibrary.org/obo/NCBITaxon_33317 Protostomia http://purl.obolibrary.org/obo/NCBITaxon_7147 Diptera http://purl.obolibrary.org/obo/NCBITaxon_50557 Insecta http://purl.obolibrary.org/obo/NCBITaxon_7399 Hymenoptera http://purl.obolibrary.org/obo/NCBITaxon_50557 Insecta http://purl.obolibrary.org/obo/NCBITaxon_33213 Bilateria http://purl.obolibrary.org/obo/NCBITaxon_6072 Eumetazoa http://purl.obolibrary.org/obo/NCBITaxon_197563 Mandibulata http://purl.obolibrary.org/obo/NCBITaxon_6656 Arthropoda http://purl.obolibrary.org/obo/NCBITaxon_6946 Acariformes http://purl.obolibrary.org/obo/NCBITaxon_6656 Arthropoda http://purl.obolibrary.org/obo/NCBITaxon_70320 Eriophyidae http://purl.obolibrary.org/obo/NCBITaxon_6946 Acariformes http://purl.obolibrary.org/obo/NCBITaxon_50557 Insecta http://purl.obolibrary.org/obo/NCBITaxon_6960 Hexapoda http://purl.obolibrary.org/obo/NCBITaxon_33406 Cecidomyiidae http://purl.obolibrary.org/obo/NCBITaxon_7147 Diptera http://purl.obolibrary.org/obo/NCBITaxon_6656 Arthropoda http://purl.obolibrary.org/obo/NCBITaxon_88770 Panarthropoda http://purl.obolibrary.org/obo/NCBITaxon_3511 Quercus http://purl.obolibrary.org/obo/NCBITaxon_3503 Fagaceae http://purl.obolibrary.org/obo/NCBITaxon_75144 Cynipini http://purl.obolibrary.org/obo/NCBITaxon_73401 Cynipidae http://purl.obolibrary.org/obo/NCBITaxon_1389465 Disholcaspis http://purl.obolibrary.org/obo/NCBITaxon_75144 Cynipini http://purl.obolibrary.org/obo/NCBITaxon_1934078 Acraspis http://purl.obolibrary.org/obo/NCBITaxon_75144 Cynipini http://purl.obolibrary.org/obo/NCBITaxon_1540852 Disholcaspis quercusglobulus http://purl.obolibrary.org/obo/NCBITaxon_1389465 Disholcaspis http://purl.obolibrary.org/obo/GALLONT_0000047 Acraspis gemula http://purl.obolibrary.org/obo/NCBITaxon_1934078 Acraspis http://purl.obolibrary.org/obo/NCBITaxon_2714064 Acraspis erinacei http://purl.obolibrary.org/obo/NCBITaxon_1934078 Acraspis http://purl.obolibrary.org/obo/NCBITaxon_3513 Quercus alba http://purl.obolibrary.org/obo/GALLONT_0000042 Quercus sect. Quercus http://purl.obolibrary.org/obo/NCBITaxon_109362 Aceria http://purl.obolibrary.org/obo/NCBITaxon_70320 Eriophyidae http://purl.obolibrary.org/obo/GALLONT_0000045 Acraspis erinacei (sexgen) http://purl.obolibrary.org/obo/NCBITaxon_2714064 Acraspis erinacei http://purl.obolibrary.org/obo/NCBITaxon_73401 Cynipidae http://purl.obolibrary.org/obo/NCBITaxon_7399 Hymenoptera http://purl.obolibrary.org/obo/GALLONT_0000039 Acraspis erinacei (agamic) http://purl.obolibrary.org/obo/CARO_0000030 asexual organism http://purl.obolibrary.org/obo/BFO_0000002 continuant An entity that exists in full at any time in which it exists at all, persists through time while maintaining its identity and has no temporal parts. http://purl.obolibrary.org/obo/IAO_0000078 curation status specification The curation status of the term. The allowed values come from an enumerated list of predefined terms. See the specification of these instances for more detailed definitions of each enumerated value. http://purl.obolibrary.org/obo/CARO_0000005 anatomical space Non-material anatomical entity of three dimensions, that is generated by morphogenetic or other physiologic processes; is surrounded by one or more anatomical structures; contains one or more organism substances or anatomical structures. http://purl.obolibrary.org/obo/GALLONT_0000001 DEPRECATED plant gall http://purl.obolibrary.org/obo/GALLONT_0000033 DEPRECATED erineum http://purl.obolibrary.org/obo/BFO_0000001 entity http://purl.obolibrary.org/obo/RO_0000052 characteristic of http://purl.obolibrary.org/obo/RO_0002314 characteristic of part of inheres_in a relation between a specifically dependent continuant (the characteristic) and any other entity (the bearer), in which the characteristic depends on the bearer for its existence. http://purl.obolibrary.org/obo/RO_0000079 function of http://purl.obolibrary.org/obo/RO_0000052 characteristic of is function of a relation between a function and an independent continuant (the bearer), in which the function specifically depends on the bearer for its existence http://purl.obolibrary.org/obo/RO_0000080 quality of http://purl.obolibrary.org/obo/RO_0000052 characteristic of quality_of a relation between a quality and an independent continuant (the bearer), in which the quality specifically depends on the bearer for its existence http://purl.obolibrary.org/obo/RO_0000085 has function http://purl.obolibrary.org/obo/RO_0000053 has characteristic has_function a relation between an independent continuant (the bearer) and a function, in which the function specifically depends on the bearer for its existence http://purl.obolibrary.org/obo/RO_0000086 has quality http://purl.obolibrary.org/obo/RO_0000053 has characteristic has_quality a relation between an independent continuant (the bearer) and a quality, in which the quality specifically depends on the bearer for its existence http://purl.obolibrary.org/obo/BFO_0000051 has_part http://purl.obolibrary.org/obo/RO_0002131 overlaps has_part a core relation that holds between a whole and its part http://purl.obolibrary.org/obo/RO_0000087 has role http://purl.obolibrary.org/obo/RO_0000053 has characteristic has_role a relation between an independent continuant (the bearer) and a role, in which the role specifically depends on the bearer for its existence http://purl.obolibrary.org/obo/RO_0002327 enables http://purl.obolibrary.org/obo/RO_0002215 capable of is executing c enables p iff c is capable of p and c acts to execute p. http://purl.obolibrary.org/obo/RO_0002409 indirectly negatively regulates http://purl.obolibrary.org/obo/RO_0012012 indirectly regulates indirectly inhibits p indirectly negatively regulates q iff p is indirectly causally upstream of q and p negatively regulates q. http://purl.obolibrary.org/obo/RO_0002436 molecularly interacts with http://purl.obolibrary.org/obo/RO_0002434 interacts with molecularly binds with An interaction relationship in which the two partners are molecular entities that directly physically interact with each other for example via a stable binding interaction or a brief interaction during which one modifies the other. http://purl.obolibrary.org/obo/RO_0002449 directly negatively regulates activity of http://purl.obolibrary.org/obo/RO_0002448 directly regulates activity of directly inhibits The entity A, immediately upstream of the entity B, has an activity that negatively regulates an activity performed by B. For example, A and B may be gene products and binding of B by A negatively regulates the kinase activity of B. http://purl.obolibrary.org/obo/BFO_0000062 preceded_by http://purl.obolibrary.org/obo/RO_0002086 ends after preceded_by The assertion P preceded_by P1 tells us something about Ps in general: that is, it tells us something about what happened earlier, given what we know about what happened later. Thus it does not provide information pointing in the opposite direction, concerning instances of P1 in general; that is, that each is such as to be succeeded by some instance of P. http://purl.obolibrary.org/obo/RO_0000081 role of http://purl.obolibrary.org/obo/RO_0000052 characteristic of role_of a relation between a role and an independent continuant (the bearer), in which the role specifically depends on the bearer for its existence http://purl.obolibrary.org/obo/BFO_0000050 part_of http://purl.obolibrary.org/obo/RO_0002131 overlaps part_of a core relation that holds between a part and its whole http://purl.obolibrary.org/obo/RO_0002233 has input http://purl.obolibrary.org/obo/RO_0000057 has_participant consumes p has input c iff: p is a process, c is a material entity, c is a participant in p, c is present at the start of p, and the state of c is modified during p. http://purl.obolibrary.org/obo/RO_0002314 characteristic of part of http://purl.obolibrary.org/obo/RO_0002502 depends on inheres in part of q characteristic of part of w if and only if there exists some p such that q inheres in p and p part of w. http://purl.obolibrary.org/obo/RO_0002215 capable of http://purl.obolibrary.org/obo/RO_0002216 capable of part of has function realized in A relation between a material entity (such as a cell) and a process, in which the material entity has the ability to carry out the process. http://purl.obolibrary.org/obo/RO_0002331 involved in http://purl.obolibrary.org/obo/RO_0002431 involved in or involved in regulation of enables part of c involved_in p if and only if c enables some process p', and p' is part of p http://purl.obolibrary.org/obo/RO_0002431 involved in or involved in regulation of http://purl.obolibrary.org/obo/RO_0002500 causal agent in process involved in or reguates c involved in or regulates p if and only if either (i) c is involved in p or (ii) c is involved in regulation of p http://purl.obolibrary.org/obo/RO_0002437 biotically interacts with http://purl.obolibrary.org/obo/RO_0002321 ecologically related to interacts with on organism level An interaction relationship in which at least one of the partners is an organism and the other is either an organism or an abiotic entity with which the organism interacts. http://purl.obolibrary.org/obo/RO_0002216 capable of part of http://purl.obolibrary.org/obo/RO_0002500 causal agent in process has function in c stands in this relationship to p if and only if there exists some p' such that c is capable_of p', and p' is part_of p. http://purl.obolibrary.org/obo/RO_0002329 part of structure that is capable of http://purl.obolibrary.org/obo/RO_0002328 functionally related to 0 this relation holds between c and p when c is part of some c', and c' is capable of p. http://purl.obolibrary.org/obo/RO_0002418 causally upstream of or within http://purl.obolibrary.org/obo/RO_0002501 causal relation between processes influences (processual) p is 'causally upstream or within' q iff p is causally related to q, and the end of p precedes, or is coincident with, the end of q. http://purl.obolibrary.org/obo/RO_0002407 indirectly positively regulates http://purl.obolibrary.org/obo/RO_0012012 indirectly regulates indirectly activates p indirectly positively regulates q iff p is indirectly causally upstream of q and p positively regulates q. http://purl.obolibrary.org/obo/RO_0002450 directly positively regulates activity of http://purl.obolibrary.org/obo/RO_0002448 directly regulates activity of directly activates The entity A, immediately upstream of the entity B, has an activity that positively regulates an activity performed by B. For example, A and B may be gene products and binding of B by A positively regulates the kinase activity of B. http://purl.obolibrary.org/obo/RO_0002025 has effector activity http://purl.obolibrary.org/obo/RO_0002017 has component activity A 'has effector activity' B if A and B are GO molecular functions (GO_0003674), A 'has component activity' B and B is the effector (output function) of B. Each compound function has only one effector activity. http://purl.obolibrary.org/obo/RO_0002160 only_in_taxon http://purl.obolibrary.org/obo/RO_0002162 in taxon x only in taxon y if and only if x is in taxon y, and there is no other organism z such that y!=z a and x is in taxon z. http://purl.obolibrary.org/obo/RO_0002258 developmentally_preceded_by http://purl.obolibrary.org/obo/RO_0002324 developmentally related to X developmentally related to y if and only if there exists some developmental process (GO:0032502) p such that x and y both participates in p, and x is the output of p and y is the input of p. http://purl.obolibrary.org/obo/RO_0002162 in taxon http://purl.obolibrary.org/obo/RO_0002320 evolutionarily related to x is in taxon y if an only if y is an organism, and the relationship between x and y is one of: part of (reflexive), developmentally preceded by, derives from, secreted by, expressed. http://purl.obolibrary.org/obo/RO_0002286 developmentally succeeded by http://purl.obolibrary.org/obo/RO_0002384 has developmental potential involving Inverse of developmentally preceded by http://purl.obolibrary.org/obo/RO_0002384 has developmental potential involving http://purl.obolibrary.org/obo/RO_0002324 developmentally related to x has developmental potential involving y iff x is capable of a developmental process with output y. y may be the successor of x, or may be a different structure in the vicinity (as for example in the case of developmental induction). http://purl.obolibrary.org/obo/RO_0002388 has potential to directly develop into http://purl.obolibrary.org/obo/RO_0002387 has potential to develop into x has potential to directly develop into y iff x directly develops into y or x is capable of directly developing into y http://purl.obolibrary.org/obo/BFO_0000063 precedes http://purl.obolibrary.org/obo/RO_0002222 temporally related to x precedes y if and only if the time point at which x ends is before or equivalent to the time point at which y starts. Formally: x precedes y iff ω(x) <= α(y), where α is a function that maps a process to a start point, and ω is a function that maps a process to an end point. http://purl.obolibrary.org/obo/RO_0002018 has component process http://purl.obolibrary.org/obo/RO_0002180 has component w 'has process component' p if p and w are processes, w 'has part' p and w is such that it can be directly disassembled into into n parts p, p2, p3, ..., pn, where these parts are of similar type. http://purl.obolibrary.org/obo/RO_0019000 regulates characteristic http://purl.obolibrary.org/obo/RO_0002410 causally related to A relationship that holds between a process and a characteristic in which process (P) regulates characteristic (C) iff: P results in the existence of C OR affects the intensity or magnitude of C. http://purl.obolibrary.org/obo/RO_0019001 positively regulates characteristic http://purl.obolibrary.org/obo/RO_0019000 regulates characteristic A relationship that holds between a process and a characteristic in which process (P) positively regulates characteristic (C) iff: P results in an increase in the intensity or magnitude of C. http://purl.obolibrary.org/obo/RO_0019002 negatively regulates characteristic http://purl.obolibrary.org/obo/RO_0019000 regulates characteristic A relationship that holds between a process and a characteristic in which process (P) negatively regulates characteristic (C) iff: P results in a decrease in the intensity or magnitude of C. http://purl.obolibrary.org/obo/RO_0002202 develops_from http://purl.obolibrary.org/obo/RO_0002254 has developmental contribution from x develops from y if and only if either (a) x directly develops from y or (b) there exists some z such that x directly develops from z and z develops from y http://purl.obolibrary.org/obo/RO_0002333 enabled by http://purl.obolibrary.org/obo/RO_0002328 functionally related to inverse of enables http://purl.obolibrary.org/obo/RO_0002404 causally downstream of http://purl.obolibrary.org/obo/RO_0002427 causally downstream of or within inverse of upstream of http://purl.obolibrary.org/obo/RO_0002412 immediately causally upstream of http://purl.obolibrary.org/obo/RO_0002411 causally upstream of p is immediately causally upstream of q iff p is causally upstream of q, and the end of p is coincident with the beginning of q. http://purl.obolibrary.org/obo/RO_0002448 directly regulates activity of http://purl.obolibrary.org/obo/RO_0011002 regulates activity of The entity A, immediately upstream of the entity B, has an activity that regulates an activity performed by B. For example, A and B may be gene products and binding of B by A regulates the kinase activity of B. A and B can be physically interacting but not necessarily. Immediately upstream means there are no intermediate entity between A and B. http://purl.obolibrary.org/obo/RO_0002566 causally influences http://purl.obolibrary.org/obo/RO_0002506 causal relation between entities The entity or characteristic A is causally upstream of the entity or characteristic B, A having an effect on B. An entity corresponds to any biological type of entity as long as a mass is measurable. A characteristic corresponds to a particular specificity of an entity (e.g., phenotype, shape, size). http://purl.obolibrary.org/obo/RO_0002263 acts upstream of http://purl.obolibrary.org/obo/RO_0002264 acts upstream of or within c acts upstream of p if and only if c enables some f that is involved in p' and p' occurs chronologically before p, is not part of p, and affects the execution of p. c is a material entity and f, p, p' are processes. http://purl.obolibrary.org/obo/RO_0002304 causally upstream of, positive effect http://purl.obolibrary.org/obo/RO_0004047 causally upstream of or within, positive effect p is causally upstream of, positive effect q iff p is casually upstream of q, and the execution of p is required for the execution of q. http://purl.obolibrary.org/obo/RO_0002305 causally upstream of, negative effect http://purl.obolibrary.org/obo/RO_0004046 causally upstream of or within, negative effect p is causally upstream of, negative effect q iff p is casually upstream of q, and the execution of p decreases the execution of q. http://purl.obolibrary.org/obo/RO_0002131 overlaps http://purl.obolibrary.org/obo/RO_0002323 mereotopologically related to x overlaps y if and only if there exists some z such that x has part z and z part of y http://purl.obolibrary.org/obo/RO_0002254 has developmental contribution from http://purl.obolibrary.org/obo/RO_0002258 developmentally_preceded_by x has developmental contribution from y iff x has some part z such that z develops from y http://purl.obolibrary.org/obo/RO_0000091 has disposition http://purl.obolibrary.org/obo/RO_0000053 has characteristic a relation between an independent continuant (the bearer) and a disposition, in which the disposition specifically depends on the bearer for its existence http://purl.obolibrary.org/obo/RO_0000092 disposition of http://purl.obolibrary.org/obo/RO_0000052 characteristic of inverse of has disposition http://purl.obolibrary.org/obo/RO_0011002 regulates activity of http://purl.obolibrary.org/obo/RO_0002566 causally influences The entity A has an activity that regulates an activity of the entity B. For example, A and B are gene products where the catalytic activity of A regulates the kinase activity of B. http://purl.obolibrary.org/obo/RO_0002411 causally upstream of http://purl.obolibrary.org/obo/RO_0002418 causally upstream of or within p is causally upstream of q iff p is causally related to q, the end of p precedes the end of q, and p is not an occurrent part of q. http://purl.obolibrary.org/obo/RO_0002211 regulates http://purl.obolibrary.org/obo/RO_0002411 causally upstream of p regulates q iff p is causally upstream of q, the execution of p is not constant and varies according to specific conditions, and p influences the rate or magnitude of execution of q due to an effect either on some enabler of q or some enabler of a part of q. http://purl.obolibrary.org/obo/RO_0002212 negatively regulates http://purl.obolibrary.org/obo/RO_0002211 regulates p negatively regulates q iff p regulates q, and p decreases the rate or magnitude of execution of q. http://purl.obolibrary.org/obo/RO_0002213 positively regulates http://purl.obolibrary.org/obo/RO_0002211 regulates p positively regulates q iff p regulates q, and p increases the rate or magnitude of execution of q. http://purl.obolibrary.org/obo/RO_0002180 has component http://purl.obolibrary.org/obo/BFO_0000051 has_part w 'has component' p if w 'has part' p and w is such that it can be directly disassembled into into n parts p, p2, p3, ..., pn, where these parts are of similar type. http://purl.obolibrary.org/obo/RO_0002352 input of http://purl.obolibrary.org/obo/RO_0002328 functionally related to inverse of has input http://purl.obolibrary.org/obo/RO_0002203 develops into http://purl.obolibrary.org/obo/RO_0002387 has potential to develop into inverse of develops from http://purl.obolibrary.org/obo/RO_0002387 has potential to develop into http://purl.obolibrary.org/obo/RO_0002384 has developmental potential involving x has the potential to develop into y iff x develops into y or if x is capable of developing into y http://purl.obolibrary.org/obo/RO_0002023 directly negatively regulated by http://purl.obolibrary.org/obo/RO_0002022 directly regulated by Process(P2) is directly negatively regulated by process(P1) iff: P1 negatively regulates P2 via direct physical interaction between an agent executing P1 (or some part of P1) and an agent executing P2 (or some part of P2). For example, if protein A has protein binding activity(P1) that targets protein B and this binding negatively regulates the kinase activity (P2) of protein B then P2 directly negatively regulated by P1. http://purl.obolibrary.org/obo/RO_0002024 directly positively regulated by http://purl.obolibrary.org/obo/RO_0002022 directly regulated by Process(P2) is directly postively regulated by process(P1) iff: P1 positively regulates P2 via direct physical interaction between an agent executing P1 (or some part of P1) and an agent executing P2 (or some part of P2). For example, if protein A has protein binding activity(P1) that targets protein B and this binding positively regulates the kinase activity (P2) of protein B then P2 is directly postively regulated by P1. http://purl.obolibrary.org/obo/RO_0015007 increased in magnitude relative to http://purl.obolibrary.org/obo/RO_0015006 different in magnitude relative to q1 increased_in_magnitude_relative_to q2 if and only if magnitude(q1) > magnitude(q2). Here, magnitude(q) is a function that maps a quality to a unit-invariant scale. http://purl.obolibrary.org/obo/RO_0012011 indirectly causally upstream of http://purl.obolibrary.org/obo/RO_0002411 causally upstream of p is indirectly causally upstream of q iff p is causally upstream of q and there exists some process r such that p is causally upstream of r and r is causally upstream of q. http://purl.obolibrary.org/obo/RO_0012012 indirectly regulates http://purl.obolibrary.org/obo/RO_0012011 indirectly causally upstream of p indirectly regulates q iff p is indirectly causally upstream of q and p regulates q. http://purl.obolibrary.org/obo/RO_0002264 acts upstream of or within http://purl.obolibrary.org/obo/RO_0002500 causal agent in process c acts upstream of or within p if c is enables f, and f is causally upstream of or within p. c is a material entity and p is an process. http://purl.obolibrary.org/obo/RO_0004031 enables subfunction http://purl.obolibrary.org/obo/RO_0002328 functionally related to Holds between an entity and an process P where the entity enables some larger compound process, and that larger process has-part P. http://purl.obolibrary.org/obo/RO_0004034 acts upstream of, positive effect http://purl.obolibrary.org/obo/RO_0004032 acts upstream of or within, positive effect c 'acts upstream of, positive effect' p if c is enables f, and f is causally upstream of p, and the direction of f is positive http://purl.obolibrary.org/obo/RO_0004035 acts upstream of, negative effect http://purl.obolibrary.org/obo/RO_0004033 acts upstream of or within, negative effect c 'acts upstream of, negative effect' p if c is enables f, and f is causally upstream of p, and the direction of f is negative http://purl.obolibrary.org/obo/RO_0002255 developmentally contributes to http://purl.obolibrary.org/obo/RO_0002385 has potential to developmentally contribute to inverse of has developmental contribution from http://purl.obolibrary.org/obo/RO_0002334 regulated by http://purl.obolibrary.org/obo/RO_0002427 causally downstream of or within inverse of regulates http://purl.obolibrary.org/obo/RO_0002335 negatively regulated by http://purl.obolibrary.org/obo/RO_0002334 regulated by inverse of negatively regulates http://purl.obolibrary.org/obo/RO_0002336 positively regulated by http://purl.obolibrary.org/obo/RO_0002334 regulated by inverse of positively regulates http://purl.obolibrary.org/obo/RO_0002385 has potential to developmentally contribute to http://purl.obolibrary.org/obo/RO_0002384 has developmental potential involving x has potential to developmentrally contribute to y iff x developmentally contributes to y or x is capable of developmentally contributing to y http://purl.obolibrary.org/obo/RO_0002427 causally downstream of or within http://purl.obolibrary.org/obo/RO_0002501 causal relation between processes inverse of causally upstream of or within http://purl.obolibrary.org/obo/RO_0002500 causal agent in process http://purl.obolibrary.org/obo/RO_0002595 causal relation between material entity and a process A relationship between a material entity and a process where the material entity has some causal role that influences the process http://purl.obolibrary.org/obo/RO_0002501 causal relation between processes http://purl.obolibrary.org/obo/RO_0002410 causally related to p is causally related to q if and only if p or any part of p and q or any part of q are linked by a chain of events where each event pair is one where the execution of p influences the execution of q. p may be upstream, downstream, part of, or a container of q. http://purl.obolibrary.org/obo/RO_0002584 has part structure that is capable of http://purl.obolibrary.org/obo/RO_0002595 causal relation between material entity and a process s 'has part structure that is capable of' p if and only if there exists some part x such that s 'has part' x and x 'capable of' p http://purl.obolibrary.org/obo/RO_0002595 causal relation between material entity and a process http://purl.obolibrary.org/obo/RO_0002410 causally related to A relationship that holds between a material entity and a process in which causality is involved, with either the material entity or some part of the material entity exerting some influence over the process, or the process influencing some aspect of the material entity. http://purl.obolibrary.org/obo/RO_0002596 capable of regulating http://purl.obolibrary.org/obo/RO_0002500 causal agent in process Holds between c and p if and only if c is capable of some activity a, and a regulates p. http://purl.obolibrary.org/obo/RO_0002597 capable of negatively regulating http://purl.obolibrary.org/obo/RO_0002596 capable of regulating Holds between c and p if and only if c is capable of some activity a, and a negatively regulates p. http://purl.obolibrary.org/obo/RO_0002598 capable of positively regulating http://purl.obolibrary.org/obo/RO_0002596 capable of regulating Holds between c and p if and only if c is capable of some activity a, and a positively regulates p. http://purl.obolibrary.org/obo/RO_0002608 process has causal agent http://purl.obolibrary.org/obo/RO_0002410 causally related to Inverse of 'causal agent in process' http://purl.obolibrary.org/obo/RO_0002015 has positive regulatory component activity http://purl.obolibrary.org/obo/RO_0002013 has regulatory component activity A relationship that holds between a GO molecular function and a component of that molecular function that positively regulates the activity of the whole. More formally, A 'has regulatory component activity' B iff :A and B are GO molecular functions (GO_0003674), A has_component B and A is positively regulated by B. http://purl.obolibrary.org/obo/RO_0002013 has regulatory component activity http://purl.obolibrary.org/obo/RO_0002017 has component activity A 'has regulatory component activity' B if A and B are GO molecular functions (GO_0003674), A has_component B and A is regulated by B. http://purl.obolibrary.org/obo/RO_0002014 has negative regulatory component activity http://purl.obolibrary.org/obo/RO_0002013 has regulatory component activity A relationship that holds between a GO molecular function and a component of that molecular function that negatively regulates the activity of the whole. More formally, A 'has regulatory component activity' B iff :A and B are GO molecular functions (GO_0003674), A has_component B and A is negatively regulated by B. http://purl.obolibrary.org/obo/RO_0002428 involved in regulation of http://purl.obolibrary.org/obo/RO_0002431 involved in or involved in regulation of c involved in regulation of p if c is involved in some p' and p' regulates some p http://purl.obolibrary.org/obo/RO_0002429 involved in positive regulation of http://purl.obolibrary.org/obo/RO_0002428 involved in regulation of c involved in regulation of p if c is involved in some p' and p' positively regulates some p http://purl.obolibrary.org/obo/RO_0002430 involved in negative regulation of http://purl.obolibrary.org/obo/RO_0002428 involved in regulation of c involved in regulation of p if c is involved in some p' and p' negatively regulates some p http://purl.obolibrary.org/obo/RO_0002440 symbiotically interacts with http://purl.obolibrary.org/obo/RO_0002574 participates in a biotic-biotic interaction with A biotic interaction in which the two organisms live together in more or less intimate association. http://purl.obolibrary.org/obo/RO_0002454 has host http://purl.obolibrary.org/obo/RO_0002440 symbiotically interacts with X 'has host' y if and only if: x is an organism, y is an organism, and x can live on the surface of or within the body of y http://purl.obolibrary.org/obo/RO_0002578 directly regulates http://purl.obolibrary.org/obo/RO_0002211 regulates p directly regulates q iff p is immediately causally upstream of q and p regulates q. http://purl.obolibrary.org/obo/RO_0002629 directly positively regulates http://purl.obolibrary.org/obo/RO_0002578 directly regulates p directly positively regulates q iff p is immediately causally upstream of q, and p positively regulates q. http://purl.obolibrary.org/obo/RO_0002630 directly negatively regulates http://purl.obolibrary.org/obo/RO_0002578 directly regulates p directly negatively regulates q iff p is immediately causally upstream of q, and p negatively regulates q. http://purl.obolibrary.org/obo/RO_0002087 immediately preceded by http://purl.obolibrary.org/obo/BFO_0000062 preceded_by starts_at_end_of http://purl.obolibrary.org/obo/RO_0002090 immediately precedes http://purl.obolibrary.org/obo/BFO_0000063 precedes meets http://purl.obolibrary.org/obo/RO_0002447 phosphorylates http://purl.obolibrary.org/obo/RO_0002436 molecularly interacts with An interaction relation between x and y in which x catalyzes a reaction in which a phosphate group is added to y. http://purl.obolibrary.org/obo/RO_0002405 immediately causally downstream of http://purl.obolibrary.org/obo/RO_0002404 causally downstream of http://purl.obolibrary.org/obo/RO_0002017 has component activity http://purl.obolibrary.org/obo/RO_0002018 has component process http://purl.obolibrary.org/obo/RO_0002559 causally influenced by http://purl.obolibrary.org/obo/RO_0002506 causal relation between entities http://purl.obolibrary.org/obo/RO_0002563 interaction relation helper property http://purl.obolibrary.org/obo/RO_0002464 helper property (not for use in curation) http://purl.obolibrary.org/obo/RO_0002564 molecular interaction relation helper property http://purl.obolibrary.org/obo/RO_0002563 interaction relation helper property http://purl.obolibrary.org/obo/RO_0002481 is kinase activity http://purl.obolibrary.org/obo/RO_0002564 molecular interaction relation helper property http://purl.obolibrary.org/obo/RO_0002086 ends after http://purl.obolibrary.org/obo/RO_0002222 temporally related to http://purl.obolibrary.org/obo/RO_0004033 acts upstream of or within, negative effect http://purl.obolibrary.org/obo/RO_0002264 acts upstream of or within http://purl.obolibrary.org/obo/RO_0004032 acts upstream of or within, positive effect http://purl.obolibrary.org/obo/RO_0002264 acts upstream of or within http://purl.obolibrary.org/obo/RO_0002574 participates in a biotic-biotic interaction with http://purl.obolibrary.org/obo/RO_0002437 biotically interacts with http://purl.obolibrary.org/obo/RO_0002022 directly regulated by http://purl.obolibrary.org/obo/RO_0002334 regulated by http://purl.obolibrary.org/obo/RO_0002506 causal relation between entities http://purl.obolibrary.org/obo/RO_0002410 causally related to http://purl.obolibrary.org/obo/RO_0004046 causally upstream of or within, negative effect http://purl.obolibrary.org/obo/RO_0002418 causally upstream of or within http://purl.obolibrary.org/obo/RO_0004047 causally upstream of or within, positive effect http://purl.obolibrary.org/obo/RO_0002418 causally upstream of or within http://purl.obolibrary.org/obo/GALLONT_0000059 induced by http://purl.obolibrary.org/obo/RO_0002440 symbiotically interacts with http://purl.obolibrary.org/obo/RO_0002453 host of http://purl.obolibrary.org/obo/RO_0002440 symbiotically interacts with http://purl.obolibrary.org/obo/RO_0000053 has characteristic is bearer of Inverse of characteristic_of http://purl.obolibrary.org/obo/RO_0000056 participates_in participates_in a relation between a continuant and a process, in which the continuant is somehow involved in the process http://purl.obolibrary.org/obo/RO_0000057 has participant has_participant a relation between a process and a continuant, in which the continuant is somehow involved in the process http://purl.obolibrary.org/obo/RO_0002320 evolutionarily related to A relationship that holds via some environmental process http://purl.obolibrary.org/obo/RO_0002324 developmentally related to A relationship that holds between entities participating in some developmental process (GO:0032502) http://purl.obolibrary.org/obo/RO_0017001 device utilizes material X device utilizes material Y means X and Y are material entities, and X is capable of some process P that has input Y. http://purl.obolibrary.org/obo/RO_0002434 interacts with A relationship that holds between two entities in which the processes executed by the two entities are causally connected. http://purl.obolibrary.org/obo/RO_0015006 different in magnitude relative to q1 different_in_magnitude_relative_to q2 if and only if magnitude(q1) NOT =~ magnitude(q2). Here, magnitude(q) is a function that maps a quality to a unit-invariant scale. http://purl.obolibrary.org/obo/RO_0002323 mereotopologically related to A mereological relationship or a topological relationship http://purl.obolibrary.org/obo/RO_0002328 functionally related to A grouping relationship for any relationship directly involving a function, or that holds because of a function of one of the related entities. http://purl.obolibrary.org/obo/RO_0015011 has cross section s3 has_cross_section s3 if and only if : there exists some 2d plane that intersects the bearer of s3, and the impression of s3 upon that plane has shape quality s2. http://purl.obolibrary.org/obo/RO_0015012 reciprocal of q1 reciprocal_of q2 if and only if : q1 and q2 are relational qualities and a phenotype e q1 e2 mutually implies a phenotype e2 q2 e. http://purl.obolibrary.org/obo/RO_0002321 ecologically related to A relationship that is mediated in some way by the environment or environmental feature (ENVO:00002297) http://purl.obolibrary.org/obo/RO_0002410 causally related to relation that links two events, processes, states, or objects such that one event, process, state, or object (a cause) contributes to the production of another event, process, state, or object (an effect) where the cause is partly or wholly responsible for the effect, and the effect is partly or wholly dependent on the cause. http://purl.obolibrary.org/obo/GALLONT_0000000 has associate http://purl.obolibrary.org/obo/RO_0002464 helper property (not for use in curation) http://purl.obolibrary.org/obo/RO_0002222 temporally related to http://purl.obolibrary.org/obo/RO_0002502 depends on http://purl.obolibrary.org/obo/GALLONT_0000052 hasDiameterInMm http://purl.obolibrary.org/obo/GALLONT_1000041 hasLengthInMm http://purl.obolibrary.org/obo/GALLONT_1000060 hasHeightInMm http://purl.obolibrary.org/obo/GALLONT_1000062 has seasonal maturity http://purl.obolibrary.org/obo/GALLONT_1000150 has seasonal emergence