<?xml version="1.0"?>
<?xml-stylesheet type="text/xsl" href="https://ontobee.org/ontology/view/CCFO-Slim?iri=http://purl.obolibrary.org/obo/UBERON_0001555"?>
<rdf:RDF xmlns="http://www.w3.org/2002/07/owl#"
     xml:base="http://www.w3.org/2002/07/owl"
     xmlns:core="http://purl.obolibrary.org/obo/uberon/core#"
     xmlns:ns5="http://purl.org/ccf/"
     xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#"
     xmlns:owl="http://www.w3.org/2002/07/owl#"
     xmlns:oboInOwl="http://www.geneontology.org/formats/oboInOwl#"
     xmlns:xsd="http://www.w3.org/2001/XMLSchema#"
     xmlns:skos="http://www.w3.org/2004/02/skos/core#"
     xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#"
     xmlns:ns4="http://purl.obolibrary.org/obo/"
     xmlns:foaf="http://xmlns.com/foaf/0.1/"
     xmlns:dc="http://purl.org/dc/elements/1.1/">
    


    <!-- 
    ///////////////////////////////////////////////////////////////////////////////////////
    //
    // Annotation properties
    //
    ///////////////////////////////////////////////////////////////////////////////////////
     -->

    <AnnotationProperty rdf:about="http://purl.org/ccf/ccf_pref_label"/>
    <AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas">
        <rdfs:label>human_reference_atlas</rdfs:label>
    </AnnotationProperty>
    <AnnotationProperty rdf:about="http://www.w3.org/2004/02/skos/core#prefLabel"/>
    <AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/IAO_0000115"/>
    <AnnotationProperty rdf:about="http://www.geneontology.org/formats/oboInOwl#hasDbXref"/>
    <AnnotationProperty rdf:about="http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym"/>
    <AnnotationProperty rdf:about="http://www.geneontology.org/formats/oboInOwl#id"/>
    <AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/UBPROP_0000003"/>
    <AnnotationProperty rdf:about="http://www.geneontology.org/formats/oboInOwl#hasBroadSynonym"/>
    <AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/UBPROP_0000013"/>
    <AnnotationProperty rdf:about="http://purl.org/ccf/ccf_part_of"/>
    <AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/UBPROP_0000001"/>
    <AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/UBPROP_0000012"/>
    <AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/RO_0002161"/>
    <AnnotationProperty rdf:about="http://www.geneontology.org/formats/oboInOwl#hasOBONamespace"/>
    <AnnotationProperty rdf:about="http://www.geneontology.org/formats/oboInOwl#hasExactSynonym"/>
    <AnnotationProperty rdf:about="http://www.geneontology.org/formats/oboInOwl#hasNarrowSynonym"/>
    <AnnotationProperty rdf:about="http://www.geneontology.org/formats/oboInOwl#inSubset"/>
    <AnnotationProperty rdf:about="http://purl.org/ccf/ccf_asctb_type"/>
    <AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/RO_0002175"/>
    


    <!-- 
    ///////////////////////////////////////////////////////////////////////////////////////
    //
    // Datatypes
    //
    ///////////////////////////////////////////////////////////////////////////////////////
     -->

    


    <!-- 
    ///////////////////////////////////////////////////////////////////////////////////////
    //
    // Object Properties
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     -->

    


    <!-- http://purl.obolibrary.org/obo/BFO_0000050 -->

    <ObjectProperty rdf:about="http://purl.obolibrary.org/obo/BFO_0000050">
        <rdf:type rdf:resource="http://www.w3.org/2002/07/owl#TransitiveProperty"/>
        <rdfs:label xml:lang="en">part of</rdfs:label>
    </ObjectProperty>
    


    <!-- 
    ///////////////////////////////////////////////////////////////////////////////////////
    //
    // Classes
    //
    ///////////////////////////////////////////////////////////////////////////////////////
     -->

    


    <!-- http://purl.obolibrary.org/obo/NCBITaxon_9606 -->

    <Class rdf:about="http://purl.obolibrary.org/obo/NCBITaxon_9606">
        <rdfs:label>Homo sapiens</rdfs:label>
    </Class>
    


    <!-- http://purl.obolibrary.org/obo/UBERON_0000025 -->

    <Class rdf:about="http://purl.obolibrary.org/obo/UBERON_0000025">
        <rdfs:label>tube</rdfs:label>
    </Class>
    


    <!-- http://purl.obolibrary.org/obo/UBERON_0001007 -->

    <Class rdf:about="http://purl.obolibrary.org/obo/UBERON_0001007">
        <rdfs:label>digestive system</rdfs:label>
    </Class>
    


    <!-- http://purl.obolibrary.org/obo/UBERON_0001555 -->

    <Class rdf:about="http://purl.obolibrary.org/obo/UBERON_0001555">
        <rdfs:label>digestive tract</rdfs:label>
        <rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/UBERON_0000025"/>
        <rdfs:subClassOf>
            <Restriction>
                <onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000050"/>
                <someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/UBERON_0001007"/>
            </Restriction>
        </rdfs:subClassOf>
        <oboInOwl:hasNarrowSynonym>alimentary canal</oboInOwl:hasNarrowSynonym>
        <oboInOwl:hasExactSynonym>digestive tube</oboInOwl:hasExactSynonym>
        <oboInOwl:hasDbXref>galen:AlimentaryTract</oboInOwl:hasDbXref>
        <ns4:UBPROP_0000012>FMA also has a term &#39;gastrointestinal tract&#39;, but this includes the liver.</ns4:UBPROP_0000012>
        <oboInOwl:hasDbXref>UMLS:C0017189</oboInOwl:hasDbXref>
        <oboInOwl:hasDbXref>AAO:0010023</oboInOwl:hasDbXref>
        <oboInOwl:hasDbXref>NCIT:C34082</oboInOwl:hasDbXref>
        <oboInOwl:id>UBERON:0001555</oboInOwl:id>
        <ns4:UBPROP_0000013>we following Kardong in naming the entire tube from mouth to anus the alimentary canal. Kardong calls the portion of this tract that excludes buccal cavity and pharynx the &#39;alimentary canal&#39;, consider adding an extra class for this</ns4:UBPROP_0000013>
        <oboInOwl:hasDbXref>BTO:0000511</oboInOwl:hasDbXref>
        <oboInOwl:hasRelatedSynonym>gut tube</oboInOwl:hasRelatedSynonym>
        <oboInOwl:hasDbXref>BILA:0000083</oboInOwl:hasDbXref>
        <oboInOwl:hasExactSynonym>enteric tract</oboInOwl:hasExactSynonym>
        <oboInOwl:hasOBONamespace>uberon</oboInOwl:hasOBONamespace>
        <oboInOwl:hasBroadSynonym>gut</oboInOwl:hasBroadSynonym>
        <oboInOwl:hasDbXref>MA:0000917</oboInOwl:hasDbXref>
        <ns5:ccf_asctb_type>AS</ns5:ccf_asctb_type>
        <oboInOwl:hasDbXref>VHOG:0000309</oboInOwl:hasDbXref>
        <ns4:IAO_0000115>A tube extending from the mouth to the anus.</ns4:IAO_0000115>
        <oboInOwl:hasDbXref>WBbt:0005743</oboInOwl:hasDbXref>
        <ns4:UBPROP_0000012>we place the MA and EMAPA class here, although the intent is probably a smaller region. See https://github.com/obophenotype/uberon/issues/509</ns4:UBPROP_0000012>
        <ns5:ccf_pref_label>digestive tract</ns5:ccf_pref_label>
        <oboInOwl:hasDbXref>TAO:0000112</oboInOwl:hasDbXref>
        <oboInOwl:hasDbXref>FBbt:00003125</oboInOwl:hasDbXref>
        <oboInOwl:hasRelatedSynonym>digestive canal</oboInOwl:hasRelatedSynonym>
        <ns4:UBPROP_0000001>The alimentary or digestive tract, and associated organs.[TAO]</ns4:UBPROP_0000001>
        <oboInOwl:hasDbXref>EMAPA:16247</oboInOwl:hasDbXref>
        <oboInOwl:hasDbXref>TGMA:0001819</oboInOwl:hasDbXref>
        <oboInOwl:hasNarrowSynonym>alimentary tract</oboInOwl:hasNarrowSynonym>
        <oboInOwl:hasDbXref>EHDAA2:0000726</oboInOwl:hasDbXref>
        <oboInOwl:hasDbXref>BTO:0000545</oboInOwl:hasDbXref>
        <ns4:UBPROP_0000003>The bilaterian gut is typically a complete tube that opens to the exterior at both ends. It consists of mouth, foregut, midgut, hindgut, and anus (reference 1); Although all vertebrates have a digestive tract and accessory glands, various parts of this system are not necessarily homologous, analogous, or even present in all species. Therefore, broad comparisons can be best made under the listings of headgut, foregut, midgut, pancreas and biliary system, hindgut (reference 2).[well established][VHOG]</ns4:UBPROP_0000003>
        <oboInOwl:hasDbXref>EHDAA:518</oboInOwl:hasDbXref>
        <oboInOwl:hasDbXref>ZFA:0000112</oboInOwl:hasDbXref>
        <skos:prefLabel>digestive tract</skos:prefLabel>
        <oboInOwl:hasDbXref>FMA:45615</oboInOwl:hasDbXref>
        <ns4:RO_0002161 rdf:resource="http://purl.obolibrary.org/obo/NCBITaxon_147099"/>
        <ns4:RO_0002161 rdf:resource="http://purl.obolibrary.org/obo/NCBITaxon_41324"/>
        <ns4:RO_0002175 rdf:resource="http://purl.obolibrary.org/obo/NCBITaxon_9606"/>
        <ns5:ccf_part_of rdf:resource="http://purl.obolibrary.org/obo/UBERON_0001007"/>
        <rdfs:isDefinedBy rdf:resource="http://purl.obolibrary.org/obo/uberon.owl"/>
        <oboInOwl:inSubset rdf:resource="http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas"/>
        <oboInOwl:inSubset rdf:resource="http://purl.obolibrary.org/obo/uberon/core#uberon_slim"/>
        <oboInOwl:inSubset rdf:resource="http://purl.obolibrary.org/obo/uberon/core#vertebrate_core"/>
    </Class>
</rdf:RDF>



<!-- Generated by the OWL API (version 3.2.4.1806) http://owlapi.sourceforge.net -->



