<?xml version="1.0"?>
<?xml-stylesheet type="text/xsl" href="https://ontobee.org/ontology/view/CIDO?iri=http://purl.obolibrary.org/obo/CIDO_0000745"?>
<rdf:RDF xmlns="http://www.w3.org/2002/07/owl#"
     xml:base="http://www.w3.org/2002/07/owl"
     xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#"
     xmlns:owl="http://www.w3.org/2002/07/owl#"
     xmlns:oboInOwl="http://www.geneontology.org/formats/oboInOwl#"
     xmlns:xsd="http://www.w3.org/2001/XMLSchema#"
     xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#"
     xmlns:foaf="http://xmlns.com/foaf/0.1/"
     xmlns:dc="http://purl.org/dc/elements/1.1/"
     xmlns:ns3="http://purl.obolibrary.org/obo/">
    


    <!-- 
    ///////////////////////////////////////////////////////////////////////////////////////
    //
    // Annotation properties
    //
    ///////////////////////////////////////////////////////////////////////////////////////
     -->

    <AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/IAO_0000118"/>
    <AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/IAO_0000117"/>
    <AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/IAO_0000119"/>
    <AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/IAO_0000115"/>
    


    <!-- 
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    //
    // Datatypes
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    <!-- 
    ///////////////////////////////////////////////////////////////////////////////////////
    //
    // Object Properties
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    <!-- http://purl.obolibrary.org/obo/BFO_0000051 -->

    <ObjectProperty rdf:about="http://purl.obolibrary.org/obo/BFO_0000051">
        <rdf:type rdf:resource="http://www.w3.org/2002/07/owl#ReflexiveProperty"/>
        <rdf:type rdf:resource="http://www.w3.org/2002/07/owl#TransitiveProperty"/>
        <rdfs:label>has part</rdfs:label>
        <rdfs:label xml:lang="en">has part</rdfs:label>
        <rdfs:label>has_part</rdfs:label>
    </ObjectProperty>
    


    <!-- http://purl.obolibrary.org/obo/CIDO_0000600 -->

    <ObjectProperty rdf:about="http://purl.obolibrary.org/obo/CIDO_0000600">
        <rdfs:label xml:lang="en">is AA variant of</rdfs:label>
    </ObjectProperty>
    


    <!-- http://purl.obolibrary.org/obo/CIDO_0000707 -->

    <ObjectProperty rdf:about="http://purl.obolibrary.org/obo/CIDO_0000707">
        <rdfs:label xml:lang="en">has mutated from</rdfs:label>
    </ObjectProperty>
    


    <!-- 
    ///////////////////////////////////////////////////////////////////////////////////////
    //
    // Data properties
    //
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    <!-- http://purl.obolibrary.org/obo/CIDO_0000613 -->

    <DatatypeProperty rdf:about="http://purl.obolibrary.org/obo/CIDO_0000613">
        <rdfs:label xml:lang="en">has amino acid position</rdfs:label>
    </DatatypeProperty>
    


    <!-- 
    ///////////////////////////////////////////////////////////////////////////////////////
    //
    // Classes
    //
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     -->

    


    <!-- http://purl.obolibrary.org/obo/CHEBI_24898 -->

    <Class rdf:about="http://purl.obolibrary.org/obo/CHEBI_24898">
        <rdfs:label>isoleucine</rdfs:label>
    </Class>
    


    <!-- http://purl.obolibrary.org/obo/CHEBI_26986 -->

    <Class rdf:about="http://purl.obolibrary.org/obo/CHEBI_26986">
        <rdfs:label>threonine</rdfs:label>
    </Class>
    


    <!-- http://purl.obolibrary.org/obo/CIDO_0000380 -->

    <Class rdf:about="http://purl.obolibrary.org/obo/CIDO_0000380">
        <rdfs:label xml:lang="en">SARS-CoV-2 Eta variant</rdfs:label>
    </Class>
    


    <!-- http://purl.obolibrary.org/obo/CIDO_0000745 -->

    <Class rdf:about="http://purl.obolibrary.org/obo/CIDO_0000745">
        <rdfs:label xml:lang="en">S3159T in SARS-CoV-2 pp1a protein</rdfs:label>
        <rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/CIDO_0001075"/>
        <rdfs:subClassOf>
            <Restriction>
                <onProperty rdf:resource="http://purl.obolibrary.org/obo/CIDO_0000707"/>
                <someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/CHEBI_24898"/>
            </Restriction>
        </rdfs:subClassOf>
        <rdfs:subClassOf>
            <Restriction>
                <onProperty rdf:resource="http://purl.obolibrary.org/obo/CIDO_0000613"/>
                <hasValue rdf:datatype="http://www.w3.org/2001/XMLSchema#integer">3159</hasValue>
            </Restriction>
        </rdfs:subClassOf>
        <rdfs:subClassOf>
            <Restriction>
                <onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000051"/>
                <someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/CHEBI_26986"/>
            </Restriction>
        </rdfs:subClassOf>
        <rdfs:subClassOf>
            <Restriction>
                <onProperty rdf:resource="http://purl.obolibrary.org/obo/CIDO_0000600"/>
                <someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/CIDO_0000380"/>
            </Restriction>
        </rdfs:subClassOf>
        <ns3:IAO_0000115>An AA mutation or AA variant that has mutated an amino acid at position 3159 into threonine  in pp1a.</ns3:IAO_0000115>
        <ns3:IAO_0000117>Anthony Huffman</ns3:IAO_0000117>
        <ns3:IAO_0000119>https://cov-lineages.org/</ns3:IAO_0000119>
        <ns3:IAO_0000118>pp1a-S3159T</ns3:IAO_0000118>
    </Class>
    


    <!-- http://purl.obolibrary.org/obo/CIDO_0001075 -->

    <Class rdf:about="http://purl.obolibrary.org/obo/CIDO_0001075">
        <rdfs:label xml:lang="en">AA variant in SARS-CoV-2 nsp4 protein</rdfs:label>
    </Class>
</rdf:RDF>



<!-- Generated by the OWL API (version 3.2.4.1806) http://owlapi.sourceforge.net -->



