has output has topic GO-term enrichment data Gene-set enrichment analysis Gene set testing Identify classes of genes or proteins that are over or under-represented in a large set of genes or proteins. For example analysis of a set of genes corresponding to a gene expression profile, annotated with Gene Ontology (GO) concepts, where eventual over-/under-representation of certain GO concept within the studied set of genes is revealed. Gene sets can be defined beforehand by biological function, chromosome locations and so on. "Gene set analysis" (often used interchangeably or in an overlapping sense with "gene-set enrichment analysis") refers to the functional analysis (term enrichment) of a differentially expressed set of genes, rather than all genes analysed. The Gene Ontology (GO) is typically used, the input is a set of Gene IDs, and the output of the analysis is typically a ranked list of GO concepts, each associated with a p-value. beta12orEarlier Gene-set over-represenation analysis GO-term enrichment Gene set analysis Analyse gene expression patterns to identify sets of genes that are associated with a specific trait, condition, clinical outcome etc. Functional enrichment analysis Gene Ontology term enrichment GSEA Gene Ontology concept enrichment Expression analysis Enrichment analysis Function analysis