<?xml version="1.0"?>
<?xml-stylesheet type="text/xsl" href="https://ontobee.org/ontology/view/EDAM?iri=http://edamontology.org/topic_0154"?>
<rdf:RDF xmlns="http://www.w3.org/2002/07/owl#"
     xml:base="http://www.w3.org/2002/07/owl"
     xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#"
     xmlns:owl="http://www.w3.org/2002/07/owl#"
     xmlns:oboInOwl="http://www.geneontology.org/formats/oboInOwl#"
     xmlns:xsd="http://www.w3.org/2001/XMLSchema#"
     xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#"
     xmlns:foaf="http://xmlns.com/foaf/0.1/"
     xmlns:dc="http://purl.org/dc/elements/1.1/"
     xmlns:ns3="http://edamontology.org/">
    


    <!-- 
    ///////////////////////////////////////////////////////////////////////////////////////
    //
    // Annotation properties
    //
    ///////////////////////////////////////////////////////////////////////////////////////
     -->

    <AnnotationProperty rdf:about="http://edamontology.org/created_in"/>
    <AnnotationProperty rdf:about="http://edamontology.org/isdebtag"/>
    <AnnotationProperty rdf:about="http://edamontology.org/bio"/>
    <AnnotationProperty rdf:about="http://edamontology.org/topics"/>
    <AnnotationProperty rdf:about="http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym"/>
    <AnnotationProperty rdf:about="http://www.geneontology.org/formats/oboInOwl#hasNarrowSynonym"/>
    <AnnotationProperty rdf:about="http://www.geneontology.org/formats/oboInOwl#inSubset"/>
    <AnnotationProperty rdf:about="http://www.geneontology.org/formats/oboInOwl#hasDefinition"/>
    <AnnotationProperty rdf:about="http://www.geneontology.org/formats/oboInOwl#hasHumanReadableId"/>
    


    <!-- 
    ///////////////////////////////////////////////////////////////////////////////////////
    //
    // Datatypes
    //
    ///////////////////////////////////////////////////////////////////////////////////////
     -->

    


    <!-- 
    ///////////////////////////////////////////////////////////////////////////////////////
    //
    // Classes
    //
    ///////////////////////////////////////////////////////////////////////////////////////
     -->

    


    <!-- http://edamontology.org/topic_0081 -->

    <Class rdf:about="http://edamontology.org/topic_0081">
        <rdfs:label>Structure analysis</rdfs:label>
    </Class>
    


    <!-- http://edamontology.org/topic_0154 -->

    <Class rdf:about="http://edamontology.org/topic_0154">
        <rdfs:label>Small molecules</rdfs:label>
        <rdfs:subClassOf rdf:resource="http://edamontology.org/topic_0081"/>
        <ns3:isdebtag rdf:datatype="http://www.w3.org/2001/XMLSchema#boolean">true</ns3:isdebtag>
        <oboInOwl:hasNarrowSynonym>Targets</oboInOwl:hasNarrowSynonym>
        <oboInOwl:hasNarrowSynonym>Peptides and amino acids</oboInOwl:hasNarrowSynonym>
        <rdfs:comment>This includes the structures of drugs, drug target, their interactions and binding affinities. Also the structures of reactants or products of metabolism, for example small molecules such as including vitamins, polyols, nucleotides and amino acids. Also the physicochemical, biochemical or structural properties of amino acids or peptides. Also structural and associated data for toxic chemical substances.</rdfs:comment>
        <oboInOwl:hasNarrowSynonym>Drug targets</oboInOwl:hasNarrowSynonym>
        <oboInOwl:hasRelatedSynonym>CHEBI:23367</oboInOwl:hasRelatedSynonym>
        <oboInOwl:hasHumanReadableId>Small_molecules</oboInOwl:hasHumanReadableId>
        <ns3:created_in>beta12orEarlier</ns3:created_in>
        <oboInOwl:hasNarrowSynonym>Drugs and target structures</oboInOwl:hasNarrowSynonym>
        <oboInOwl:hasNarrowSynonym>Peptides</oboInOwl:hasNarrowSynonym>
        <oboInOwl:hasNarrowSynonym>Drug structures</oboInOwl:hasNarrowSynonym>
        <oboInOwl:hasNarrowSynonym>Chemical structures</oboInOwl:hasNarrowSynonym>
        <oboInOwl:hasNarrowSynonym>Toxins and targets</oboInOwl:hasNarrowSynonym>
        <rdfs:comment>Small molecules include organic molecules, metal-organic compounds, small polypeptides, small polysaccharides and oligonucleotides. Structural data is usually included.</rdfs:comment>
        <rdfs:comment>This concept excludes macromolecules such as proteins and nucleic acids.</rdfs:comment>
        <oboInOwl:hasNarrowSynonym>Toxins</oboInOwl:hasNarrowSynonym>
        <oboInOwl:hasDefinition>Small molecules of biological significance, typically archival, curation, processing and analysis of structural information.</oboInOwl:hasDefinition>
        <oboInOwl:hasNarrowSynonym>Metabolite structures</oboInOwl:hasNarrowSynonym>
        <oboInOwl:hasNarrowSynonym>Amino acids</oboInOwl:hasNarrowSynonym>
        <oboInOwl:hasNarrowSynonym>Target structures</oboInOwl:hasNarrowSynonym>
        <oboInOwl:inSubset rdf:resource="http://edamontology.org/bio"/>
        <oboInOwl:inSubset rdf:resource="http://edamontology.org/topics"/>
        <rdfs:seeAlso rdf:resource="https://en.wikipedia.org/wiki/Metabolite"/>
        <rdfs:seeAlso rdf:resource="https://en.wikipedia.org/wiki/Small_molecule"/>
    </Class>
</rdf:RDF>



<!-- Generated by the OWL API (version 3.2.4.1806) http://owlapi.sourceforge.net -->



