<?xml version="1.0"?>
<?xml-stylesheet type="text/xsl" href="https://ontobee.org/ontology/view/EFO?iri=http://www.ebi.ac.uk/efo/EFO_0023013"?>
<rdf:RDF xmlns="http://www.w3.org/2002/07/owl#"
     xml:base="http://www.w3.org/2002/07/owl"
     xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#"
     xmlns:owl="http://www.w3.org/2002/07/owl#"
     xmlns:oboInOwl="http://www.geneontology.org/formats/oboInOwl#"
     xmlns:xsd="http://www.w3.org/2001/XMLSchema#"
     xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#"
     xmlns:ns2="http://purl.obolibrary.org/obo/"
     xmlns:foaf="http://xmlns.com/foaf/0.1/"
     xmlns:dc="http://purl.org/dc/elements/1.1/"
     xmlns:efo="http://www.ebi.ac.uk/efo/">
    


    <!-- 
    ///////////////////////////////////////////////////////////////////////////////////////
    //
    // Annotation properties
    //
    ///////////////////////////////////////////////////////////////////////////////////////
     -->

    <AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/IAO_0000115"/>
    <AnnotationProperty rdf:about="http://purl.org/dc/elements/1.1/date"/>
    <AnnotationProperty rdf:about="http://purl.org/dc/elements/1.1/creator"/>
    


    <!-- 
    ///////////////////////////////////////////////////////////////////////////////////////
    //
    // Datatypes
    //
    ///////////////////////////////////////////////////////////////////////////////////////
     -->

    


    <!-- 
    ///////////////////////////////////////////////////////////////////////////////////////
    //
    // Classes
    //
    ///////////////////////////////////////////////////////////////////////////////////////
     -->

    


    <!-- http://purl.obolibrary.org/obo/OBI_0000272 -->

    <Class rdf:about="http://purl.obolibrary.org/obo/OBI_0000272">
        <rdfs:label>protocol</rdfs:label>
        <rdfs:label xml:lang="en">protocol</rdfs:label>
    </Class>
    


    <!-- http://www.ebi.ac.uk/efo/EFO_0008994 -->

    <Class rdf:about="http://www.ebi.ac.uk/efo/EFO_0008994">
        <rdfs:label>spatial transcriptomics</rdfs:label>
    </Class>
    


    <!-- http://www.ebi.ac.uk/efo/EFO_0023013 -->

    <Class rdf:about="http://www.ebi.ac.uk/efo/EFO_0023013">
        <rdfs:label xml:lang="en">spatial transcriptomics data processing protocol</rdfs:label>
        <rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/OBI_0000272"/>
        <rdfs:subClassOf rdf:resource="http://www.ebi.ac.uk/efo/EFO_0008994"/>
        <dc:date rdf:datatype="http://www.w3.org/2001/XMLSchema#dateTime">2026-06-11T11:11:49Z</dc:date>
        <ns2:IAO_0000115>A protocol specifying the computational steps and parameters for processing raw spatial transcriptomics data, encompassing image alignment, spot detection, barcode demultiplexing, read mapping, UMI counting, spatial registration, and quality control of spatially resolved gene expression data.</ns2:IAO_0000115>
        <dc:creator>Zoe May Pendlington</dc:creator>
    </Class>
</rdf:RDF>



<!-- Generated by the OWL API (version 3.2.4.1806) http://owlapi.sourceforge.net -->



