<?xml version="1.0"?>
<?xml-stylesheet type="text/xsl" href="https://ontobee.org/ontology/view/GENO?iri=http://purl.obolibrary.org/obo/GENO_0000611"?>
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     xmlns:owl="http://www.w3.org/2002/07/owl#"
     xmlns:oboInOwl="http://www.geneontology.org/formats/oboInOwl#"
     xmlns:xsd="http://www.w3.org/2001/XMLSchema#"
     xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#"
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     xmlns:ns3="http://purl.obolibrary.org/obo/">
    


    <!-- 
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    //
    // Annotation properties
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    <AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/IAO_0000118"/>
    <AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/IAO_0000116"/>
    <AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/IAO_0000115"/>
    


    <!-- 
    ///////////////////////////////////////////////////////////////////////////////////////
    //
    // Datatypes
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    <!-- 
    ///////////////////////////////////////////////////////////////////////////////////////
    //
    // Object Properties
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    <!-- http://purl.obolibrary.org/obo/GENO_0000968 -->

    <ObjectProperty rdf:about="http://purl.obolibrary.org/obo/GENO_0000968">
        <rdfs:label>sequence role</rdfs:label>
    </ObjectProperty>
    


    <!-- http://purl.obolibrary.org/obo/IAO_0000219 -->

    <ObjectProperty rdf:about="http://purl.obolibrary.org/obo/IAO_0000219">
        <rdfs:label>denotes</rdfs:label>
        <rdfs:label xml:lang="en">denotes</rdfs:label>
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    <!-- 
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    //
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    <!-- http://purl.obolibrary.org/obo/GENO_0000010 -->

    <Class rdf:about="http://purl.obolibrary.org/obo/GENO_0000010">
        <rdfs:label>background genome</rdfs:label>
    </Class>
    


    <!-- http://purl.obolibrary.org/obo/GENO_0000152 -->

    <Class rdf:about="http://purl.obolibrary.org/obo/GENO_0000152">
        <rdfs:label>reference</rdfs:label>
    </Class>
    


    <!-- http://purl.obolibrary.org/obo/GENO_0000611 -->

    <Class rdf:about="http://purl.obolibrary.org/obo/GENO_0000611">
        <rdfs:label xml:lang="en">genomic background</rdfs:label>
        <equivalentClass>
            <Class>
                <intersectionOf rdf:parseType="Collection">
                    <rdf:Description rdf:about="http://purl.obolibrary.org/obo/GENO_0000899"/>
                    <Restriction>
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                <onProperty rdf:resource="http://purl.obolibrary.org/obo/GENO_0000968"/>
                <someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/GENO_0000152"/>
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        </rdfs:subClassOf>
        <ns3:IAO_0000116>Being a &#39;genomic background&#39; implies that a variant genotype was derived from this background (which is the case for most model organism database genotypes/strains). This is a subtly different notion than being a &#39;reference genotype&#39; , which can be any genotype that serves as a basis for comparison. But in a sense all background genotypes are by default reference genotypes, in that the derived variant genotype is compared against it.</ns3:IAO_0000116>
        <ns3:IAO_0000118>background genotype</ns3:IAO_0000118>
        <ns3:IAO_0000115>A genomic genotype that specifies the baseline sequence of a genome from which a variant genome is derived (through the introduction of sequence alterations).</ns3:IAO_0000115>
    </Class>
    


    <!-- http://purl.obolibrary.org/obo/GENO_0000899 -->

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        <rdfs:label xml:lang="en">genomic genotype</rdfs:label>
    </Class>
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