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    <!-- http://purl.obolibrary.org/obo/IAO_0000219 -->

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        <rdfs:label>denotes</rdfs:label>
        <rdfs:label xml:lang="en">denotes</rdfs:label>
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    <!-- http://purl.obolibrary.org/obo/GENO_0000516 -->

    <Class rdf:about="http://purl.obolibrary.org/obo/GENO_0000516">
        <rdfs:label>single locus complement</rdfs:label>
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    <!-- http://purl.obolibrary.org/obo/GENO_0000536 -->

    <Class rdf:about="http://purl.obolibrary.org/obo/GENO_0000536">
        <rdfs:label xml:lang="en">genotype</rdfs:label>
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    <!-- http://purl.obolibrary.org/obo/GENO_0000719 -->

    <Class rdf:about="http://purl.obolibrary.org/obo/GENO_0000719">
        <rdfs:label xml:lang="en">intrinsic genotype</rdfs:label>
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        <rdfs:comment>1. A genomic genotype is a short-hand specification of a genome that uses a representational syntax comprised of information about a reference genome (&#39;genomic background&#39;), and all specific variants from this reference (the &#39;genomic variation complement&#39;).  Conceptually, this variant genome sequence can be resolved by substituting all sequences specified by the &#39;genomic variation complement&#39; for the corresponding sequences in the reference  &#39;genomic background&#39; sequence.

2. &#39;Heritable&#39; genomic sequence is that which is passed on to subsequent generations of cells/organisms, and includes all chromosomal sequences, the mitochondrial genome, and any transmissable extrachromosomal replicons.</rdfs:comment>
        <ns3:IAO_0000116>Genotype vs Genome in GENO: An (intrinsic) genotype is an information artifact representing an indirect syntax for specifying a genome sequence.  This syntax has reference and variant components -  a &#39;background genotype&#39; and &#39;genomic variation complement&#39; - that must be operated on to resolve a specifie genome sequence.  Specifically, the genome sequence is resolved by substituting all sequences specified by the &#39;genomic variation complement&#39; for the corresponding sequences in the &#39;reference genome&#39;.  So, while the total sequence content represented in a genotype may be greater than that in a genome, the intended resolution of these sequences is to arrive at a single genome sequence. It is this end-point that we consider when holding that a genotype &#39;specifies&#39; a genome.</ns3:IAO_0000116>
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    <!-- http://purl.obolibrary.org/obo/SO_0001026 -->

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        <rdfs:label>genome</rdfs:label>
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