<?xml version="1.0"?>
<?xml-stylesheet type="text/xsl" href="https://ontobee.org/ontology/view/HINO?iri=http://purl.obolibrary.org/obo/HINO_0016800"?>
<rdf:RDF xmlns="http://www.w3.org/2002/07/owl#"
     xml:base="http://www.w3.org/2002/07/owl"
     xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#"
     xmlns:owl="http://www.w3.org/2002/07/owl#"
     xmlns:oboInOwl="http://www.geneontology.org/formats/oboInOwl#"
     xmlns:biopax-level3="http://www.biopax.org/release/biopax-level3.owl#"
     xmlns:xsd="http://www.w3.org/2001/XMLSchema#"
     xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#"
     xmlns:ro="http://www.obofoundry.org/ro/ro.owl#"
     xmlns:foaf="http://xmlns.com/foaf/0.1/"
     xmlns:dc="http://purl.org/dc/elements/1.1/"
     xmlns:ns3="http://purl.obolibrary.org/obo/">
    


    <!-- 
    ///////////////////////////////////////////////////////////////////////////////////////
    //
    // Annotation properties
    //
    ///////////////////////////////////////////////////////////////////////////////////////
     -->

    <AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/IAO_0000119"/>
    


    <!-- 
    ///////////////////////////////////////////////////////////////////////////////////////
    //
    // Datatypes
    //
    ///////////////////////////////////////////////////////////////////////////////////////
     -->

    


    <!-- 
    ///////////////////////////////////////////////////////////////////////////////////////
    //
    // Object Properties
    //
    ///////////////////////////////////////////////////////////////////////////////////////
     -->

    


    <!-- http://www.biopax.org/release/biopax-level3.owl#pathwayOrder -->

    <ObjectProperty rdf:about="http://www.biopax.org/release/biopax-level3.owl#pathwayOrder"/>
    


    <!-- http://www.obofoundry.org/ro/ro.owl#has_part -->

    <ObjectProperty rdf:about="http://www.obofoundry.org/ro/ro.owl#has_part"/>
    


    <!-- http://www.obofoundry.org/ro/ro.owl#located_in -->

    <ObjectProperty rdf:about="http://www.obofoundry.org/ro/ro.owl#located_in"/>
    


    <!-- 
    ///////////////////////////////////////////////////////////////////////////////////////
    //
    // Classes
    //
    ///////////////////////////////////////////////////////////////////////////////////////
     -->

    


    <!-- http://purl.obolibrary.org/obo/HINO_0016800 -->

    <Class rdf:about="http://purl.obolibrary.org/obo/HINO_0016800">
        <rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">ER Quality Control Compartment (ERQC)</rdfs:label>
        <rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/INO_0000021"/>
        <rdfs:subClassOf>
            <Restriction>
                <onProperty rdf:resource="http://www.biopax.org/release/biopax-level3.owl#pathwayOrder"/>
                <someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/HINO_0021049"/>
            </Restriction>
        </rdfs:subClassOf>
        <rdfs:subClassOf>
            <Restriction>
                <onProperty rdf:resource="http://www.obofoundry.org/ro/ro.owl#has_part"/>
                <someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/HINO_0025367"/>
            </Restriction>
        </rdfs:subClassOf>
        <rdfs:subClassOf>
            <Restriction>
                <onProperty rdf:resource="http://www.biopax.org/release/biopax-level3.owl#pathwayOrder"/>
                <someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/HINO_0021048"/>
            </Restriction>
        </rdfs:subClassOf>
        <rdfs:subClassOf>
            <Restriction>
                <onProperty rdf:resource="http://www.biopax.org/release/biopax-level3.owl#pathwayOrder"/>
                <someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/HINO_0021069"/>
            </Restriction>
        </rdfs:subClassOf>
        <rdfs:subClassOf>
            <Restriction>
                <onProperty rdf:resource="http://www.obofoundry.org/ro/ro.owl#has_part"/>
                <someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/HINO_0025370"/>
            </Restriction>
        </rdfs:subClassOf>
        <rdfs:subClassOf>
            <Restriction>
                <onProperty rdf:resource="http://www.biopax.org/release/biopax-level3.owl#pathwayOrder"/>
                <someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/HINO_0021070"/>
            </Restriction>
        </rdfs:subClassOf>
        <rdfs:subClassOf>
            <Restriction>
                <onProperty rdf:resource="http://www.obofoundry.org/ro/ro.owl#has_part"/>
                <someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/HINO_0025372"/>
            </Restriction>
        </rdfs:subClassOf>
        <rdfs:subClassOf>
            <Restriction>
                <onProperty rdf:resource="http://www.obofoundry.org/ro/ro.owl#has_part"/>
                <someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/HINO_0025366"/>
            </Restriction>
        </rdfs:subClassOf>
        <rdfs:subClassOf>
            <Restriction>
                <onProperty rdf:resource="http://www.obofoundry.org/ro/ro.owl#has_part"/>
                <someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/HINO_0025365"/>
            </Restriction>
        </rdfs:subClassOf>
        <rdfs:subClassOf>
            <Restriction>
                <onProperty rdf:resource="http://www.biopax.org/release/biopax-level3.owl#pathwayOrder"/>
                <someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/HINO_0021046"/>
            </Restriction>
        </rdfs:subClassOf>
        <rdfs:subClassOf>
            <Restriction>
                <onProperty rdf:resource="http://www.obofoundry.org/ro/ro.owl#located_in"/>
                <someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/NCBITaxon_9606"/>
            </Restriction>
        </rdfs:subClassOf>
        <rdfs:subClassOf>
            <Restriction>
                <onProperty rdf:resource="http://www.biopax.org/release/biopax-level3.owl#pathwayOrder"/>
                <someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/HINO_0021052"/>
            </Restriction>
        </rdfs:subClassOf>
        <rdfs:subClassOf>
            <Restriction>
                <onProperty rdf:resource="http://www.biopax.org/release/biopax-level3.owl#pathwayOrder"/>
                <someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/HINO_0021050"/>
            </Restriction>
        </rdfs:subClassOf>
        <rdfs:subClassOf>
            <Restriction>
                <onProperty rdf:resource="http://www.obofoundry.org/ro/ro.owl#has_part"/>
                <someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/HINO_0025364"/>
            </Restriction>
        </rdfs:subClassOf>
        <rdfs:subClassOf>
            <Restriction>
                <onProperty rdf:resource="http://www.obofoundry.org/ro/ro.owl#has_part"/>
                <someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/HINO_0025368"/>
            </Restriction>
        </rdfs:subClassOf>
        <rdfs:comment rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Authored: Dall&#39;Olio, GM, 2009-11-10</rdfs:comment>
        <rdfs:comment rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Edited: Jassal, B, 2010-07-02</rdfs:comment>
        <rdfs:comment rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Proteins that are released from the CNX or CRT complex with folding defects accumulate in a compartment of the ER called ERQC (Kamhi-Nesher S et al 2001). Here, the enzymes UGGG1 or UGGG2 are able to recognize glycoproteins
with minor folding process and re-add the glucose on the alpha,1,3 branch; this is a signal for the transport of these glycoproteins back to the ER, where they can interact again with CNX or CRT in order to achieve a correct folding. At the same time that the glycoprotein is in the ERQC, the enzyme ER mannosidase I progressively removes the mannoses in position 1A, 2A, B, C on the N-glycans; when the mannose on 1A is trimmed, UGGG1/UGGG2 is no longer able to re-add the glucose, and therefore the protein is destined for degradation.&lt;br&gt;For years it has been thought that the removal of the mannose in position B of the N-glycan was the signal to direct proteins to degradation. However, this mechanism has been described better by Avezov et al (Avezov V et al, 2008) and it has been demonstrated that even glycoproteins with Man8 or Man7 glycans can be re-glucosylated and interact again with CNX or CRT. For a review on this topic, see Lederkremer GZ, 2009 and MÃ¤Ã¤ttÃ¤nen P et al, 2010.</rdfs:comment>
        <ns3:IAO_0000119 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Pubmed11408579</ns3:IAO_0000119>
        <ns3:IAO_0000119 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Pubmed18003979</ns3:IAO_0000119>
        <ns3:IAO_0000119 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Pubmed19616933</ns3:IAO_0000119>
        <ns3:IAO_0000119 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Pubmed20347046</ns3:IAO_0000119>
        <rdfs:seeAlso rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Reactome Database ID Release 43901032</rdfs:seeAlso>
        <ns3:IAO_0000119 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Reactome, http://www.reactome.org</ns3:IAO_0000119>
        <rdfs:seeAlso rdf:datatype="http://www.w3.org/2001/XMLSchema#string">ReactomeREACT_25091</rdfs:seeAlso>
        <rdfs:comment rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Reviewed: Gagneux, P, 2010-11-18</rdfs:comment>
    </Class>
    


    <!-- http://purl.obolibrary.org/obo/HINO_0021046 -->

    <Class rdf:about="http://purl.obolibrary.org/obo/HINO_0021046">
        <rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PathwayStep3140</rdfs:label>
    </Class>
    


    <!-- http://purl.obolibrary.org/obo/HINO_0021048 -->

    <Class rdf:about="http://purl.obolibrary.org/obo/HINO_0021048">
        <rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PathwayStep3141</rdfs:label>
    </Class>
    


    <!-- http://purl.obolibrary.org/obo/HINO_0021049 -->

    <Class rdf:about="http://purl.obolibrary.org/obo/HINO_0021049">
        <rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PathwayStep3142</rdfs:label>
    </Class>
    


    <!-- http://purl.obolibrary.org/obo/HINO_0021050 -->

    <Class rdf:about="http://purl.obolibrary.org/obo/HINO_0021050">
        <rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PathwayStep3143</rdfs:label>
    </Class>
    


    <!-- http://purl.obolibrary.org/obo/HINO_0021052 -->

    <Class rdf:about="http://purl.obolibrary.org/obo/HINO_0021052">
        <rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PathwayStep3144</rdfs:label>
    </Class>
    


    <!-- http://purl.obolibrary.org/obo/HINO_0021069 -->

    <Class rdf:about="http://purl.obolibrary.org/obo/HINO_0021069">
        <rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PathwayStep3139</rdfs:label>
    </Class>
    


    <!-- http://purl.obolibrary.org/obo/HINO_0021070 -->

    <Class rdf:about="http://purl.obolibrary.org/obo/HINO_0021070">
        <rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PathwayStep3138</rdfs:label>
    </Class>
    


    <!-- http://purl.obolibrary.org/obo/HINO_0025364 -->

    <Class rdf:about="http://purl.obolibrary.org/obo/HINO_0025364">
        <rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Glycoproteins with lesser folding defects get transported back to the ER and the CNX/CRT complex</rdfs:label>
    </Class>
    


    <!-- http://purl.obolibrary.org/obo/HINO_0025365 -->

    <Class rdf:about="http://purl.obolibrary.org/obo/HINO_0025365">
        <rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Glycoproteins with major folding defects are sent to degradation by EDEMs</rdfs:label>
    </Class>
    


    <!-- http://purl.obolibrary.org/obo/HINO_0025366 -->

    <Class rdf:about="http://purl.obolibrary.org/obo/HINO_0025366">
        <rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Re-addition of a glucose on the alpha 1,3 branch</rdfs:label>
    </Class>
    


    <!-- http://purl.obolibrary.org/obo/HINO_0025367 -->

    <Class rdf:about="http://purl.obolibrary.org/obo/HINO_0025367">
        <rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Trimming of the second mannose on the A branch</rdfs:label>
    </Class>
    


    <!-- http://purl.obolibrary.org/obo/HINO_0025368 -->

    <Class rdf:about="http://purl.obolibrary.org/obo/HINO_0025368">
        <rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Trimming of the first mannose on the A branch</rdfs:label>
    </Class>
    


    <!-- http://purl.obolibrary.org/obo/HINO_0025370 -->

    <Class rdf:about="http://purl.obolibrary.org/obo/HINO_0025370">
        <rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Trimming of the terminal mannose on the C branch</rdfs:label>
    </Class>
    


    <!-- http://purl.obolibrary.org/obo/HINO_0025372 -->

    <Class rdf:about="http://purl.obolibrary.org/obo/HINO_0025372">
        <rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Trimming of the terminal mannose on the B branch</rdfs:label>
    </Class>
    


    <!-- http://purl.obolibrary.org/obo/INO_0000021 -->

    <Class rdf:about="http://purl.obolibrary.org/obo/INO_0000021"/>
    


    <!-- http://purl.obolibrary.org/obo/NCBITaxon_9606 -->

    <Class rdf:about="http://purl.obolibrary.org/obo/NCBITaxon_9606"/>
</rdf:RDF>



<!-- Generated by the OWL API (version 3.2.4.1806) http://owlapi.sourceforge.net -->



