<?xml version="1.0"?>
<?xml-stylesheet type="text/xsl" href="https://ontobee.org/ontology/view/HINO?iri=http://purl.obolibrary.org/obo/HINO_0022305"?>
<rdf:RDF xmlns="http://www.w3.org/2002/07/owl#"
     xml:base="http://www.w3.org/2002/07/owl"
     xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#"
     xmlns:owl="http://www.w3.org/2002/07/owl#"
     xmlns:oboInOwl="http://www.geneontology.org/formats/oboInOwl#"
     xmlns:biopax-level3="http://www.biopax.org/release/biopax-level3.owl#"
     xmlns:xsd="http://www.w3.org/2001/XMLSchema#"
     xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#"
     xmlns:ro="http://www.obofoundry.org/ro/ro.owl#"
     xmlns:foaf="http://xmlns.com/foaf/0.1/"
     xmlns:dc="http://purl.org/dc/elements/1.1/"
     xmlns:ns3="http://purl.obolibrary.org/obo/">
    


    <!-- 
    ///////////////////////////////////////////////////////////////////////////////////////
    //
    // Annotation properties
    //
    ///////////////////////////////////////////////////////////////////////////////////////
     -->

    <AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/IAO_0000119"/>
    


    <!-- 
    ///////////////////////////////////////////////////////////////////////////////////////
    //
    // Datatypes
    //
    ///////////////////////////////////////////////////////////////////////////////////////
     -->

    


    <!-- 
    ///////////////////////////////////////////////////////////////////////////////////////
    //
    // Object Properties
    //
    ///////////////////////////////////////////////////////////////////////////////////////
     -->

    


    <!-- http://www.biopax.org/release/biopax-level3.owl#pathwayOrder -->

    <ObjectProperty rdf:about="http://www.biopax.org/release/biopax-level3.owl#pathwayOrder"/>
    


    <!-- http://www.obofoundry.org/ro/ro.owl#has_part -->

    <ObjectProperty rdf:about="http://www.obofoundry.org/ro/ro.owl#has_part"/>
    


    <!-- http://www.obofoundry.org/ro/ro.owl#located_in -->

    <ObjectProperty rdf:about="http://www.obofoundry.org/ro/ro.owl#located_in"/>
    


    <!-- 
    ///////////////////////////////////////////////////////////////////////////////////////
    //
    // Classes
    //
    ///////////////////////////////////////////////////////////////////////////////////////
     -->

    


    <!-- http://purl.obolibrary.org/obo/HINO_0009154 -->

    <Class rdf:about="http://purl.obolibrary.org/obo/HINO_0009154">
        <rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Rab5-mediated recruitment of class III PI3K to TLR9</rdfs:label>
    </Class>
    


    <!-- http://purl.obolibrary.org/obo/HINO_0009155 -->

    <Class rdf:about="http://purl.obolibrary.org/obo/HINO_0009155">
        <rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Engulfed CpG DNA binds to endosomal C-ter TLR9</rdfs:label>
    </Class>
    


    <!-- http://purl.obolibrary.org/obo/HINO_0009158 -->

    <Class rdf:about="http://purl.obolibrary.org/obo/HINO_0009158">
        <rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Engulfed CpG DNA binds to endosomal N-ter TLR9 dimer</rdfs:label>
    </Class>
    


    <!-- http://purl.obolibrary.org/obo/HINO_0009199 -->

    <Class rdf:about="http://purl.obolibrary.org/obo/HINO_0009199">
        <rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Engulfed CpG DNA binds to endosomal full-length TLR9</rdfs:label>
    </Class>
    


    <!-- http://purl.obolibrary.org/obo/HINO_0012313 -->

    <Class rdf:about="http://purl.obolibrary.org/obo/HINO_0012313">
        <rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PathwayStep6768</rdfs:label>
    </Class>
    


    <!-- http://purl.obolibrary.org/obo/HINO_0012315 -->

    <Class rdf:about="http://purl.obolibrary.org/obo/HINO_0012315">
        <rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PathwayStep6766</rdfs:label>
    </Class>
    


    <!-- http://purl.obolibrary.org/obo/HINO_0012316 -->

    <Class rdf:about="http://purl.obolibrary.org/obo/HINO_0012316">
        <rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PathwayStep6767</rdfs:label>
    </Class>
    


    <!-- http://purl.obolibrary.org/obo/HINO_0012428 -->

    <Class rdf:about="http://purl.obolibrary.org/obo/HINO_0012428">
        <rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PathwayStep6763</rdfs:label>
    </Class>
    


    <!-- http://purl.obolibrary.org/obo/HINO_0012430 -->

    <Class rdf:about="http://purl.obolibrary.org/obo/HINO_0012430">
        <rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PathwayStep6765</rdfs:label>
    </Class>
    


    <!-- http://purl.obolibrary.org/obo/HINO_0021956 -->

    <Class rdf:about="http://purl.obolibrary.org/obo/HINO_0021956">
        <rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">MyD88 dependent cascade initiated on endosome</rdfs:label>
    </Class>
    


    <!-- http://purl.obolibrary.org/obo/HINO_0022305 -->

    <Class rdf:about="http://purl.obolibrary.org/obo/HINO_0022305">
        <rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Toll Like Receptor 9 (TLR9) Cascade</rdfs:label>
        <rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/INO_0000021"/>
        <rdfs:subClassOf>
            <Restriction>
                <onProperty rdf:resource="http://www.biopax.org/release/biopax-level3.owl#pathwayOrder"/>
                <someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/HINO_0012428"/>
            </Restriction>
        </rdfs:subClassOf>
        <rdfs:subClassOf>
            <Restriction>
                <onProperty rdf:resource="http://www.obofoundry.org/ro/ro.owl#has_part"/>
                <someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/HINO_0009158"/>
            </Restriction>
        </rdfs:subClassOf>
        <rdfs:subClassOf>
            <Restriction>
                <onProperty rdf:resource="http://www.biopax.org/release/biopax-level3.owl#pathwayOrder"/>
                <someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/HINO_0012315"/>
            </Restriction>
        </rdfs:subClassOf>
        <rdfs:subClassOf>
            <Restriction>
                <onProperty rdf:resource="http://www.obofoundry.org/ro/ro.owl#located_in"/>
                <someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/NCBITaxon_9606"/>
            </Restriction>
        </rdfs:subClassOf>
        <rdfs:subClassOf>
            <Restriction>
                <onProperty rdf:resource="http://www.obofoundry.org/ro/ro.owl#has_part"/>
                <someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/HINO_0009154"/>
            </Restriction>
        </rdfs:subClassOf>
        <rdfs:subClassOf>
            <Restriction>
                <onProperty rdf:resource="http://www.obofoundry.org/ro/ro.owl#has_part"/>
                <someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/HINO_0009155"/>
            </Restriction>
        </rdfs:subClassOf>
        <rdfs:subClassOf>
            <Restriction>
                <onProperty rdf:resource="http://www.biopax.org/release/biopax-level3.owl#pathwayOrder"/>
                <someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/HINO_0012316"/>
            </Restriction>
        </rdfs:subClassOf>
        <rdfs:subClassOf>
            <Restriction>
                <onProperty rdf:resource="http://www.obofoundry.org/ro/ro.owl#has_part"/>
                <someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/HINO_0021956"/>
            </Restriction>
        </rdfs:subClassOf>
        <rdfs:subClassOf>
            <Restriction>
                <onProperty rdf:resource="http://www.obofoundry.org/ro/ro.owl#has_part"/>
                <someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/HINO_0009199"/>
            </Restriction>
        </rdfs:subClassOf>
        <rdfs:subClassOf>
            <Restriction>
                <onProperty rdf:resource="http://www.biopax.org/release/biopax-level3.owl#pathwayOrder"/>
                <someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/HINO_0012313"/>
            </Restriction>
        </rdfs:subClassOf>
        <rdfs:subClassOf>
            <Restriction>
                <onProperty rdf:resource="http://www.biopax.org/release/biopax-level3.owl#pathwayOrder"/>
                <someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/HINO_0012430"/>
            </Restriction>
        </rdfs:subClassOf>
        <rdfs:comment rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Authored: Luo, F, 2005-11-10 11:23:18</rdfs:comment>
        <rdfs:comment rdf:datatype="http://www.w3.org/2001/XMLSchema#string">CpG DNA is an unusual Pathogen-Associated Molecular Pattern (PAMP). Cytosine methylation exists in mammalian but not bacterial cells, and most (but not all) CpG in the mammalian genome is methylated. Therefore, unmethylated CpG DNA may signal the presence of microbial infection. Evidence of CpG recognition by TLR9 was demonstrated both in human and  mouse, and this type of signaling requires its internalization into late endosomal/lysosomal compartments. TLR9 has been reported to be able to discern different types of CpG motifs, and therefore that it presumably recognizes CpG DNA directly. It appears that over evolutionary periods, TLR9 molecules expressed by different species have diverged. This has led to differences in the precise sequence motif (CpG dinucleotide plus flanking regions) that optimally stimulate the innate immune system of different animals.</rdfs:comment>
        <rdfs:comment rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Edited: Shamovsky, V, 2010-11-15</rdfs:comment>
        <ns3:IAO_0000119 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">ISBN0781735149</ns3:IAO_0000119>
        <ns3:IAO_0000119 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Pubmed11130078</ns3:IAO_0000119>
        <ns3:IAO_0000119 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Pubmed11470918</ns3:IAO_0000119>
        <ns3:IAO_0000119 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Pubmed11564765</ns3:IAO_0000119>
        <ns3:IAO_0000119 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Pubmed14751759</ns3:IAO_0000119>
        <ns3:IAO_0000119 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Pubmed7700380</ns3:IAO_0000119>
        <ns3:IAO_0000119 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Pubmed9799232</ns3:IAO_0000119>
        <rdfs:seeAlso rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Reactome Database ID Release 43168138</rdfs:seeAlso>
        <ns3:IAO_0000119 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Reactome, http://www.reactome.org</ns3:IAO_0000119>
        <rdfs:seeAlso rdf:datatype="http://www.w3.org/2001/XMLSchema#string">ReactomeREACT_9047</rdfs:seeAlso>
        <rdfs:comment rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Reviewed: Gale M, Jr, 2006-10-31 16:45:01</rdfs:comment>
        <rdfs:comment rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Reviewed: Gillespie, ME, 2010-10-29</rdfs:comment>
    </Class>
    


    <!-- http://purl.obolibrary.org/obo/INO_0000021 -->

    <Class rdf:about="http://purl.obolibrary.org/obo/INO_0000021"/>
    


    <!-- http://purl.obolibrary.org/obo/NCBITaxon_9606 -->

    <Class rdf:about="http://purl.obolibrary.org/obo/NCBITaxon_9606"/>
</rdf:RDF>



<!-- Generated by the OWL API (version 3.2.4.1806) http://owlapi.sourceforge.net -->



