<?xml version="1.0"?>
<?xml-stylesheet type="text/xsl" href="https://ontobee.org/ontology/view/MOD?iri=http://purl.obolibrary.org/obo/MOD_00883"?>
<rdf:RDF xmlns="http://www.w3.org/2002/07/owl#"
     xml:base="http://www.w3.org/2002/07/owl"
     xmlns:mod="http://purl.obolibrary.org/obo/mod#"
     xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#"
     xmlns:owl="http://www.w3.org/2002/07/owl#"
     xmlns:oboInOwl="http://www.geneontology.org/formats/oboInOwl#"
     xmlns:xsd="http://www.w3.org/2001/XMLSchema#"
     xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#"
     xmlns:ns2="http://purl.obolibrary.org/obo/"
     xmlns:foaf="http://xmlns.com/foaf/0.1/"
     xmlns:dc="http://purl.org/dc/elements/1.1/">
    


    <!-- 
    ///////////////////////////////////////////////////////////////////////////////////////
    //
    // Annotation properties
    //
    ///////////////////////////////////////////////////////////////////////////////////////
     -->

    <AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/DiffMono_"/>
    <AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/MassAvg_"/>
    <AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/DiffFormula_"/>
    <AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/IAO_0000115"/>
    <AnnotationProperty rdf:about="http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym"/>
    <AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/Source_"/>
    <AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/mod#PSI-MOD-slim"/>
    <AnnotationProperty rdf:about="http://www.geneontology.org/formats/oboInOwl#id"/>
    <AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/Formula_"/>
    <AnnotationProperty rdf:about="http://www.geneontology.org/formats/oboInOwl#hasOBONamespace"/>
    <AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/DiffAvg_"/>
    <AnnotationProperty rdf:about="http://www.geneontology.org/formats/oboInOwl#hasExactSynonym"/>
    <AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/MassMono_"/>
    <AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/Origin_"/>
    <AnnotationProperty rdf:about="http://www.geneontology.org/formats/oboInOwl#inSubset"/>
    <AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/TermSpec_"/>
    


    <!-- 
    ///////////////////////////////////////////////////////////////////////////////////////
    //
    // Datatypes
    //
    ///////////////////////////////////////////////////////////////////////////////////////
     -->

    


    <!-- 
    ///////////////////////////////////////////////////////////////////////////////////////
    //
    // Classes
    //
    ///////////////////////////////////////////////////////////////////////////////////////
     -->

    


    <!-- http://purl.obolibrary.org/obo/MOD_00674 -->

    <Class rdf:about="http://purl.obolibrary.org/obo/MOD_00674">
        <rdfs:label>amidated residue</rdfs:label>
    </Class>
    


    <!-- http://purl.obolibrary.org/obo/MOD_00883 -->

    <Class rdf:about="http://purl.obolibrary.org/obo/MOD_00883">
        <rdfs:label>C1-amidated residue</rdfs:label>
        <rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/MOD_00674"/>
        <ns2:MassAvg_ rdf:datatype="http://www.w3.org/2001/XMLSchema#float">-0.98000001907348632812</ns2:MassAvg_>
        <ns2:DiffAvg_ rdf:datatype="http://www.w3.org/2001/XMLSchema#float">-0.98000001907348632812</ns2:DiffAvg_>
        <ns2:DiffMono_ rdf:datatype="http://www.w3.org/2001/XMLSchema#float">-0.98401600122451782227</ns2:DiffMono_>
        <ns2:MassMono_ rdf:datatype="http://www.w3.org/2001/XMLSchema#float">-0.98401600122451782227</ns2:MassMono_>
        <oboInOwl:hasOBONamespace>PSI-MOD</oboInOwl:hasOBONamespace>
        <oboInOwl:hasExactSynonym>Amide formation (C terminus)</oboInOwl:hasExactSynonym>
        <oboInOwl:id>MOD:00883</oboInOwl:id>
        <ns2:IAO_0000115>A protein modification that effectively replaces a 1-carboxyl group (usually referred to as the alpha-carboxyl) with a carboxamido group.</ns2:IAO_0000115>
        <ns2:DiffFormula_>H 1 N 1 O -1</ns2:DiffFormula_>
        <ns2:Formula_>H 1 N 1 O -1</ns2:Formula_>
        <ns2:Origin_>X</ns2:Origin_>
        <rdfs:comment>The normal biological process involves formation of an amide of an amino acid residue in a peptide sequence where it is followed by a glycine and two basic residues, either arginine or lysine, although in some taxa only one basic residue is required. The peptide is cleaved after the basic residues, glycine is oxidized to hydroxyglycine, which decomposes to release a carboxamide C-terminal [JSG].</rdfs:comment>
        <ns2:TermSpec_>C-term</ns2:TermSpec_>
        <ns2:Source_>natural</ns2:Source_>
        <oboInOwl:hasExactSynonym>ctermamide</oboInOwl:hasExactSynonym>
        <oboInOwl:hasExactSynonym>alpha-amidated residue</oboInOwl:hasExactSynonym>
        <oboInOwl:hasExactSynonym>ResN</oboInOwl:hasExactSynonym>
        <oboInOwl:hasRelatedSynonym>Amidation</oboInOwl:hasRelatedSynonym>
        <oboInOwl:hasRelatedSynonym>Amidated</oboInOwl:hasRelatedSynonym>
        <oboInOwl:inSubset rdf:resource="http://purl.obolibrary.org/obo/mod#PSI-MOD-slim"/>
    </Class>
</rdf:RDF>



<!-- Generated by the OWL API (version 3.2.4.1806) http://owlapi.sourceforge.net -->



