<?xml version="1.0"?>
<?xml-stylesheet type="text/xsl" href="https://ontobee.org/ontology/view/MS?iri=http://purl.obolibrary.org/obo/MS_4000028"?>
<rdf:RDF xmlns="http://www.w3.org/2002/07/owl#"
     xml:base="http://www.w3.org/2002/07/owl"
     xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#"
     xmlns:owl="http://www.w3.org/2002/07/owl#"
     xmlns:oboInOwl="http://www.geneontology.org/formats/oboInOwl#"
     xmlns:ms="http://purl.obolibrary.org/obo/ms#"
     xmlns:xsd="http://www.w3.org/2001/XMLSchema#"
     xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#"
     xmlns:ns4="http://purl.obolibrary.org/obo/"
     xmlns:foaf="http://xmlns.com/foaf/0.1/"
     xmlns:dc="http://purl.org/dc/elements/1.1/">
    


    <!-- 
    ///////////////////////////////////////////////////////////////////////////////////////
    //
    // Annotation properties
    //
    ///////////////////////////////////////////////////////////////////////////////////////
     -->

    <AnnotationProperty rdf:about="http://www.geneontology.org/formats/oboInOwl#hasOBONamespace"/>
    <AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/IAO_0000115"/>
    <AnnotationProperty rdf:about="http://www.geneontology.org/formats/oboInOwl#id"/>
    


    <!-- 
    ///////////////////////////////////////////////////////////////////////////////////////
    //
    // Datatypes
    //
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    <!-- 
    ///////////////////////////////////////////////////////////////////////////////////////
    //
    // Object Properties
    //
    ///////////////////////////////////////////////////////////////////////////////////////
     -->

    


    <!-- http://purl.obolibrary.org/obo/ms#has_metric_category -->

    <ObjectProperty rdf:about="http://purl.obolibrary.org/obo/ms#has_metric_category">
        <rdfs:label>has_metric_category</rdfs:label>
    </ObjectProperty>
    


    <!-- http://purl.obolibrary.org/obo/ms#has_units -->

    <ObjectProperty rdf:about="http://purl.obolibrary.org/obo/ms#has_units">
        <rdfs:label>has_units</rdfs:label>
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    <!-- http://purl.obolibrary.org/obo/ms#has_value_concept -->

    <ObjectProperty rdf:about="http://purl.obolibrary.org/obo/ms#has_value_concept">
        <rdfs:label>has_value_concept</rdfs:label>
    </ObjectProperty>
    


    <!-- http://purl.obolibrary.org/obo/ms#has_value_type -->

    <ObjectProperty rdf:about="http://purl.obolibrary.org/obo/ms#has_value_type">
        <rdfs:label>has value type</rdfs:label>
    </ObjectProperty>
    


    <!-- 
    ///////////////////////////////////////////////////////////////////////////////////////
    //
    // Classes
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     -->

    


    <!-- http://purl.obolibrary.org/obo/MS_1000830 -->

    <Class rdf:about="http://purl.obolibrary.org/obo/MS_1000830">
        <rdfs:label>precision</rdfs:label>
    </Class>
    


    <!-- http://purl.obolibrary.org/obo/MS_4000003 -->

    <Class rdf:about="http://purl.obolibrary.org/obo/MS_4000003">
        <rdfs:label>single value</rdfs:label>
    </Class>
    


    <!-- http://purl.obolibrary.org/obo/MS_4000008 -->

    <Class rdf:about="http://purl.obolibrary.org/obo/MS_4000008">
        <rdfs:label>ID based metric</rdfs:label>
    </Class>
    


    <!-- http://purl.obolibrary.org/obo/MS_4000022 -->

    <Class rdf:about="http://purl.obolibrary.org/obo/MS_4000022">
        <rdfs:label>MS2 metric</rdfs:label>
    </Class>
    


    <!-- http://purl.obolibrary.org/obo/MS_4000028 -->

    <Class rdf:about="http://purl.obolibrary.org/obo/MS_4000028">
        <rdfs:label>fragment ppm deviation sigma</rdfs:label>
        <rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/MS_4000003"/>
        <rdfs:subClassOf>
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                <onProperty rdf:resource="http://purl.obolibrary.org/obo/ms#has_metric_category"/>
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                <someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/UO_0000169"/>
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                <onProperty rdf:resource="http://purl.obolibrary.org/obo/ms#has_value_type"/>
                <someValuesFrom rdf:resource="http://www.w3.org/2001/XMLSchema#float"/>
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        </rdfs:subClassOf>
        <rdfs:subClassOf>
            <Restriction>
                <onProperty rdf:resource="http://purl.obolibrary.org/obo/ms#has_metric_category"/>
                <someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/MS_4000022"/>
            </Restriction>
        </rdfs:subClassOf>
        <rdfs:subClassOf>
            <Restriction>
                <onProperty rdf:resource="http://purl.obolibrary.org/obo/ms#has_value_concept"/>
                <someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/STATO_0000237"/>
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        </rdfs:subClassOf>
        <rdfs:subClassOf>
            <Restriction>
                <onProperty rdf:resource="http://purl.obolibrary.org/obo/ms#has_value_concept"/>
                <someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/MS_1000830"/>
            </Restriction>
        </rdfs:subClassOf>
        <ns4:IAO_0000115>The standard deviation of the distribution of observed fragment mass accuracies (MS:4000072) [in ppm] of identified MS2 spectra after user-defined acceptance criteria (FDR) are applied</ns4:IAO_0000115>
        <rdfs:comment>Factors like temperature, airflow, or instrument calibration can cause mass shifts. See MS:4000179 for the MS1 equivalent.</rdfs:comment>
        <oboInOwl:id>MS:4000028</oboInOwl:id>
        <oboInOwl:hasOBONamespace>MS</oboInOwl:hasOBONamespace>
    </Class>
    


    <!-- http://purl.obolibrary.org/obo/STATO_0000237 -->

    <Class rdf:about="http://purl.obolibrary.org/obo/STATO_0000237"/>
    


    <!-- http://purl.obolibrary.org/obo/UO_0000169 -->

    <Class rdf:about="http://purl.obolibrary.org/obo/UO_0000169">
        <rdfs:label>parts per million</rdfs:label>
    </Class>
    


    <!-- http://www.w3.org/2001/XMLSchema#float -->

    <Class rdf:about="http://www.w3.org/2001/XMLSchema#float"/>
</rdf:RDF>



<!-- Generated by the OWL API (version 3.2.4.1806) http://owlapi.sourceforge.net -->



