<?xml version="1.0"?>
<?xml-stylesheet type="text/xsl" href="https://ontobee.org/ontology/view/PBPKO?iri=http://purl.obolibrary.org/obo/OBI_0003095"?>
<rdf:RDF xmlns="http://www.w3.org/2002/07/owl#"
     xml:base="http://www.w3.org/2002/07/owl"
     xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#"
     xmlns:owl="http://www.w3.org/2002/07/owl#"
     xmlns:oboInOwl="http://www.geneontology.org/formats/oboInOwl#"
     xmlns:xsd="http://www.w3.org/2001/XMLSchema#"
     xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#"
     xmlns:foaf="http://xmlns.com/foaf/0.1/"
     xmlns:dc="http://purl.org/dc/elements/1.1/"
     xmlns:ns3="http://purl.obolibrary.org/obo/">
    


    <!-- 
    ///////////////////////////////////////////////////////////////////////////////////////
    //
    // Annotation properties
    //
    ///////////////////////////////////////////////////////////////////////////////////////
     -->

    <AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/IAO_0000118"/>
    <AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/IAO_0000117"/>
    <AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/IAO_0000119"/>
    <AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/IAO_0000114"/>
    <AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/IAO_0000234"/>
    <AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/IAO_0000115"/>
    <AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/IAO_0000233"/>
    <AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/IAO_0000111"/>
    


    <!-- 
    ///////////////////////////////////////////////////////////////////////////////////////
    //
    // Datatypes
    //
    ///////////////////////////////////////////////////////////////////////////////////////
     -->

    


    <!-- 
    ///////////////////////////////////////////////////////////////////////////////////////
    //
    // Object Properties
    //
    ///////////////////////////////////////////////////////////////////////////////////////
     -->

    


    <!-- http://purl.obolibrary.org/obo/BFO_0000051 -->

    <ObjectProperty rdf:about="http://purl.obolibrary.org/obo/BFO_0000051">
        <rdf:type rdf:resource="http://www.w3.org/2002/07/owl#TransitiveProperty"/>
        <rdfs:label xml:lang="en">has part</rdfs:label>
    </ObjectProperty>
    


    <!-- http://purl.obolibrary.org/obo/BFO_0000055 -->

    <ObjectProperty rdf:about="http://purl.obolibrary.org/obo/BFO_0000055">
        <rdfs:label xml:lang="en">realizes</rdfs:label>
    </ObjectProperty>
    


    <!-- http://purl.obolibrary.org/obo/IAO_0000136 -->

    <ObjectProperty rdf:about="http://purl.obolibrary.org/obo/IAO_0000136">
        <rdfs:label xml:lang="en">is about</rdfs:label>
    </ObjectProperty>
    


    <!-- http://purl.obolibrary.org/obo/OBI_0000293 -->

    <ObjectProperty rdf:about="http://purl.obolibrary.org/obo/OBI_0000293">
        <rdfs:label xml:lang="en">has specified input</rdfs:label>
    </ObjectProperty>
    


    <!-- http://purl.obolibrary.org/obo/OBI_0000299 -->

    <ObjectProperty rdf:about="http://purl.obolibrary.org/obo/OBI_0000299">
        <rdfs:label xml:lang="en">has specified output</rdfs:label>
    </ObjectProperty>
    


    <!-- http://purl.obolibrary.org/obo/OBI_0000417 -->

    <ObjectProperty rdf:about="http://purl.obolibrary.org/obo/OBI_0000417">
        <rdfs:label>achieves_planned_objective</rdfs:label>
    </ObjectProperty>
    


    <!-- http://purl.obolibrary.org/obo/RO_0000052 -->

    <ObjectProperty rdf:about="http://purl.obolibrary.org/obo/RO_0000052">
        <rdf:type rdf:resource="http://www.w3.org/2002/07/owl#FunctionalProperty"/>
        <rdfs:label xml:lang="en">characteristic of</rdfs:label>
    </ObjectProperty>
    


    <!-- http://purl.obolibrary.org/obo/RO_0000081 -->

    <ObjectProperty rdf:about="http://purl.obolibrary.org/obo/RO_0000081">
        <rdfs:label xml:lang="en">role of</rdfs:label>
    </ObjectProperty>
    


    <!-- http://purl.obolibrary.org/obo/RO_0000087 -->

    <ObjectProperty rdf:about="http://purl.obolibrary.org/obo/RO_0000087">
        <rdfs:label xml:lang="en">has role</rdfs:label>
    </ObjectProperty>
    


    <!-- 
    ///////////////////////////////////////////////////////////////////////////////////////
    //
    // Classes
    //
    ///////////////////////////////////////////////////////////////////////////////////////
     -->

    


    <!-- http://purl.obolibrary.org/obo/CHEBI_33697 -->

    <Class rdf:about="http://purl.obolibrary.org/obo/CHEBI_33697">
        <rdfs:label>ribonucleic acid</rdfs:label>
    </Class>
    


    <!-- http://purl.obolibrary.org/obo/GO_0010467 -->

    <Class rdf:about="http://purl.obolibrary.org/obo/GO_0010467">
        <rdfs:label>gene expression</rdfs:label>
    </Class>
    


    <!-- http://purl.obolibrary.org/obo/IAO_0000078 -->

    <Class rdf:about="http://purl.obolibrary.org/obo/IAO_0000078"/>
    


    <!-- http://purl.obolibrary.org/obo/IAO_0000109 -->

    <Class rdf:about="http://purl.obolibrary.org/obo/IAO_0000109">
        <rdfs:label xml:lang="en">measurement datum</rdfs:label>
    </Class>
    


    <!-- http://purl.obolibrary.org/obo/OBI_0000067 -->

    <Class rdf:about="http://purl.obolibrary.org/obo/OBI_0000067">
        <rdfs:label xml:lang="en">evaluant role</rdfs:label>
    </Class>
    


    <!-- http://purl.obolibrary.org/obo/OBI_0000275 -->

    <Class rdf:about="http://purl.obolibrary.org/obo/OBI_0000275">
        <rdfs:label xml:lang="en">analyte role</rdfs:label>
    </Class>
    


    <!-- http://purl.obolibrary.org/obo/OBI_0000424 -->

    <Class rdf:about="http://purl.obolibrary.org/obo/OBI_0000424">
        <rdfs:label>transcription profiling assay</rdfs:label>
    </Class>
    


    <!-- http://purl.obolibrary.org/obo/OBI_0000880 -->

    <Class rdf:about="http://purl.obolibrary.org/obo/OBI_0000880">
        <rdfs:label>RNA extract</rdfs:label>
    </Class>
    


    <!-- http://purl.obolibrary.org/obo/OBI_0001331 -->

    <Class rdf:about="http://purl.obolibrary.org/obo/OBI_0001331">
        <rdfs:label xml:lang="en">transcription profiling identification objective</rdfs:label>
    </Class>
    


    <!-- http://purl.obolibrary.org/obo/OBI_0003094 -->

    <Class rdf:about="http://purl.obolibrary.org/obo/OBI_0003094">
        <rdfs:label>fluorescence in-situ hybridization assay</rdfs:label>
    </Class>
    


    <!-- http://purl.obolibrary.org/obo/OBI_0003095 -->

    <Class rdf:about="http://purl.obolibrary.org/obo/OBI_0003095">
        <rdfs:label>decoding amplified targeted transcripts with fluorescence in situ hybridization assay</rdfs:label>
        <rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/OBI_0000424"/>
        <rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/OBI_0003094"/>
        <rdfs:subClassOf>
            <Class>
                <intersectionOf rdf:parseType="Collection">
                    <Restriction>
                        <onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000055"/>
                        <someValuesFrom>
                            <Class>
                                <intersectionOf rdf:parseType="Collection">
                                    <rdf:Description rdf:about="http://purl.obolibrary.org/obo/OBI_0000067"/>
                                    <Restriction>
                                        <onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000081"/>
                                        <someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/OBI_0000880"/>
                                    </Restriction>
                                </intersectionOf>
                            </Class>
                        </someValuesFrom>
                    </Restriction>
                    <Restriction>
                        <onProperty rdf:resource="http://purl.obolibrary.org/obo/OBI_0000293"/>
                        <someValuesFrom>
                            <Class>
                                <intersectionOf rdf:parseType="Collection">
                                    <rdf:Description rdf:about="http://purl.obolibrary.org/obo/OBI_0000880"/>
                                    <Restriction>
                                        <onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000087"/>
                                        <someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/OBI_0000067"/>
                                    </Restriction>
                                </intersectionOf>
                            </Class>
                        </someValuesFrom>
                    </Restriction>
                </intersectionOf>
            </Class>
        </rdfs:subClassOf>
        <rdfs:subClassOf>
            <Restriction>
                <onProperty rdf:resource="http://purl.obolibrary.org/obo/OBI_0000293"/>
                <someValuesFrom>
                    <Class>
                        <intersectionOf rdf:parseType="Collection">
                            <rdf:Description rdf:about="http://purl.obolibrary.org/obo/OBI_0100051"/>
                            <Restriction>
                                <onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000051"/>
                                <someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/CHEBI_33697"/>
                            </Restriction>
                        </intersectionOf>
                    </Class>
                </someValuesFrom>
            </Restriction>
        </rdfs:subClassOf>
        <rdfs:subClassOf>
            <Restriction>
                <onProperty rdf:resource="http://purl.obolibrary.org/obo/OBI_0000299"/>
                <someValuesFrom>
                    <Restriction>
                        <onProperty rdf:resource="http://purl.obolibrary.org/obo/IAO_0000136"/>
                        <someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/GO_0010467"/>
                    </Restriction>
                </someValuesFrom>
            </Restriction>
        </rdfs:subClassOf>
        <rdfs:subClassOf>
            <Restriction>
                <onProperty rdf:resource="http://purl.obolibrary.org/obo/OBI_0000299"/>
                <someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/IAO_0000109"/>
            </Restriction>
        </rdfs:subClassOf>
        <rdfs:subClassOf>
            <Class>
                <intersectionOf rdf:parseType="Collection">
                    <Restriction>
                        <onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000055"/>
                        <someValuesFrom>
                            <Class>
                                <intersectionOf rdf:parseType="Collection">
                                    <rdf:Description rdf:about="http://purl.obolibrary.org/obo/OBI_0000275"/>
                                    <Restriction>
                                        <onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000052"/>
                                        <someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/CHEBI_33697"/>
                                    </Restriction>
                                </intersectionOf>
                            </Class>
                        </someValuesFrom>
                    </Restriction>
                    <Restriction>
                        <onProperty rdf:resource="http://purl.obolibrary.org/obo/OBI_0000293"/>
                        <someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/CHEBI_33697"/>
                    </Restriction>
                </intersectionOf>
            </Class>
        </rdfs:subClassOf>
        <rdfs:subClassOf>
            <Restriction>
                <onProperty rdf:resource="http://purl.obolibrary.org/obo/OBI_0000417"/>
                <someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/OBI_0001331"/>
            </Restriction>
        </rdfs:subClassOf>
        <ns3:IAO_0000117>Suvarna Nadendla</ns3:IAO_0000117>
        <ns3:IAO_0000115 xml:lang="en">A fluorescence in-situ hybridization assay which involves multiplex in situ digital quantification of targeted RNA transcripts in fresh or frozen tissue providing an understanding of the spatial organization of different cell types.</ns3:IAO_0000115>
        <ns3:IAO_0000119>url:http://www.weizmann.ac.il/conferences/SCG2015/sites/conferences.SCG2015/files/scg_2015_abstractbook_online_version.pdf</ns3:IAO_0000119>
        <ns3:IAO_0000119>url:https://escholarship.org/uc/item/5bq3128f</ns3:IAO_0000119>
        <ns3:IAO_0000118>DARTFISH</ns3:IAO_0000118>
        <ns3:IAO_0000117>Michelle Giglio</ns3:IAO_0000117>
        <ns3:IAO_0000117>Rebecca Jackson</ns3:IAO_0000117>
        <ns3:IAO_0000233>https://github.com/obi-ontology/obi/issues/1401</ns3:IAO_0000233>
        <ns3:IAO_0000111>decoding amplified targeted transcripts with fluorescence in situ hybridization assay</ns3:IAO_0000111>
        <ns3:IAO_0000234>CFDE</ns3:IAO_0000234>
        <ns3:IAO_0000119>url:http://genome-tech.ucsd.edu/ZhangLab/index.php/data/tech-dev/</ns3:IAO_0000119>
        <ns3:IAO_0000114 rdf:resource="http://purl.obolibrary.org/obo/IAO_0000120"/>
    </Class>
    


    <!-- http://purl.obolibrary.org/obo/OBI_0100051 -->

    <Class rdf:about="http://purl.obolibrary.org/obo/OBI_0100051">
        <rdfs:label xml:lang="en">specimen</rdfs:label>
    </Class>
    


    <!-- 
    ///////////////////////////////////////////////////////////////////////////////////////
    //
    // Individuals
    //
    ///////////////////////////////////////////////////////////////////////////////////////
     -->

    


    <!-- http://purl.obolibrary.org/obo/IAO_0000120 -->

    <Thing rdf:about="http://purl.obolibrary.org/obo/IAO_0000120">
        <rdf:type rdf:resource="http://purl.obolibrary.org/obo/IAO_0000078"/>
        <rdf:type rdf:resource="http://www.w3.org/2002/07/owl#NamedIndividual"/>
        <rdfs:label xml:lang="en">metadata complete</rdfs:label>
    </Thing>
</rdf:RDF>



<!-- Generated by the OWL API (version 3.2.4.1806) http://owlapi.sourceforge.net -->



