<?xml version="1.0"?>
<?xml-stylesheet type="text/xsl" href="https://ontobee.org/ontology/view/PCL?iri=http://purl.obolibrary.org/obo/PCL_0112619"?>
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     xml:base="http://www.w3.org/2002/07/owl"
     xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#"
     xmlns:owl="http://www.w3.org/2002/07/owl#"
     xmlns:oboInOwl="http://www.geneontology.org/formats/oboInOwl#"
     xmlns:xsd="http://www.w3.org/2001/XMLSchema#"
     xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#"
     xmlns:error="http://org.semanticweb.owlapi/error#"
     xmlns:CCN20230722="https://purl.brain-bican.org/taxonomy/CCN20230722/"
     xmlns:foaf="http://xmlns.com/foaf/0.1/"
     xmlns:dc="http://purl.org/dc/elements/1.1/"
     xmlns:ns3="http://purl.obolibrary.org/obo/">
    


    <!-- 
    ///////////////////////////////////////////////////////////////////////////////////////
    //
    // Annotation properties
    //
    ///////////////////////////////////////////////////////////////////////////////////////
     -->

    <AnnotationProperty rdf:about="http://www.geneontology.org/formats/oboInOwl#hasExactSynonym"/>
    <AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/IAO_0000115"/>
    <AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/IAO_0000028"/>
    <AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/CLM_0010001"/>
    <AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/CLM_0010003"/>
    


    <!-- 
    ///////////////////////////////////////////////////////////////////////////////////////
    //
    // Datatypes
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    <!-- 
    ///////////////////////////////////////////////////////////////////////////////////////
    //
    // Object Properties
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    <!-- http://purl.obolibrary.org/obo/RO_0015001 -->

    <ObjectProperty rdf:about="http://purl.obolibrary.org/obo/RO_0015001">
        <rdfs:label>has exemplar data</rdfs:label>
    </ObjectProperty>
    


    <!-- 
    ///////////////////////////////////////////////////////////////////////////////////////
    //
    // Classes
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     -->

    


    <!-- http://org.semanticweb.owlapi/error#Error1 -->

    <Class rdf:about="http://org.semanticweb.owlapi/error#Error1"/>
    


    <!-- http://purl.obolibrary.org/obo/CL_0000000 -->

    <Class rdf:about="http://purl.obolibrary.org/obo/CL_0000000">
        <rdfs:label>cell</rdfs:label>
    </Class>
    


    <!-- http://purl.obolibrary.org/obo/CL_0000679 -->

    <Class rdf:about="http://purl.obolibrary.org/obo/CL_0000679">
        <rdfs:label>glutamatergic neuron</rdfs:label>
    </Class>
    


    <!-- http://purl.obolibrary.org/obo/PCL_0010001 -->

    <Class rdf:about="http://purl.obolibrary.org/obo/PCL_0010001"/>
    


    <!-- http://purl.obolibrary.org/obo/PCL_0110632 -->

    <Class rdf:about="http://purl.obolibrary.org/obo/PCL_0110632">
        <rdfs:label>LA-BLA-BMA-PA Glut_3 neuron (Mmus)</rdfs:label>
    </Class>
    


    <!-- http://purl.obolibrary.org/obo/PCL_0112619 -->

    <Class rdf:about="http://purl.obolibrary.org/obo/PCL_0112619">
        <rdfs:label>LA-BLA-BMA-PA Glut_3 Col26a1 neuron (Mmus)</rdfs:label>
        <equivalentClass>
            <Class>
                <intersectionOf rdf:parseType="Collection">
                    <rdf:Description rdf:about="http://purl.obolibrary.org/obo/CL_0000000"/>
                    <Restriction>
                        <onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0015001"/>
                        <hasValue rdf:resource="https://purl.brain-bican.org/taxonomy/CCN20230722/CS20230722_CLUS_0239"/>
                    </Restriction>
                </intersectionOf>
            </Class>
        </equivalentClass>
        <rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/CL_0000679"/>
        <rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/PCL_0110632"/>
        <rdfs:subClassOf>
            <Restriction>
                <onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0015001"/>
                <hasValue rdf:resource="https://purl.brain-bican.org/taxonomy/CCN20230722/CS20230722_CLUS_0239"/>
            </Restriction>
        </rdfs:subClassOf>
        <rdfs:comment>Warning: Despite its name, LA-BLA-BMA-PA Glut_3 Col26a1 does not have cells in basomedial amygdalar nucleus (BMA), posterior amygdalar nucleus (PA). This assertion is based on data from registration to a reference standard common co-ordinate framework and parcelation scheme.</rdfs:comment>
        <oboInOwl:hasExactSynonym>0239 LA-BLA-BMA-PA Glut_3</oboInOwl:hasExactSynonym>
        <oboInOwl:hasExactSynonym>Cyp26b1 (Mmus), Gm26644 (Mmus), Ddit4l (Mmus), Pou6f2 (Mmus) expressing neuron of brain (Mus musculus)</oboInOwl:hasExactSynonym>
        <ns3:IAO_0000028>LA-BLA-BMA-PA Glut_3 Col26a1 (Mmus)</ns3:IAO_0000028>
        <rdfs:seeAlso>https://purl.brain-bican.org/taxonomy/CCN20230722/CS20230722_CLAS_01.h5ad</rdfs:seeAlso>
        <ns3:IAO_0000115>A neuron of the Mus musculus brain. It is distinguished from other cells in the brain by selective expression of Cyp26b1 (Mmus), Gm26644 (Mmus), Ddit4l (Mmus), Pou6f2 (Mmus). It is distinguished from other LA-BLA-BMA-PA Glut_3 cells by expression of Col26a1, Ddit4l, Piezo2. It is glutamatergic. These cells are located in the Cortical subplate , in or close to the regions: Lateral amygdalar nucleus, Basolateral amygdalar nucleus, anterior part, Caudoputamen . Reference transcriptomic data for this type can be found in the dataset/taxonomy - Yao et al. (2023), Whole Mouse Brain in cell set Cluster:0239 LA-BLA-BMA-PA Glut_3.</ns3:IAO_0000115>
        <rdfs:seeAlso>https://knowledge.brain-map.org/abcatlas#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%2BDggl%2FA4SgGoeExD3ZBDJOUVRJRTdUQU1QOFBRQUhPNFAABYGvpkqB6awOgaCBR4CS1egGAAcAAAUABgEBAkNCR0MwVTMwVlY5SlBSNjBUSlUAA34AAAAEAAAIVkZPRllQRlFHUktVRFFVWjNGRgAJTFZEQkpBVzhCSTVZU1MxUVVCRwAKAAsBVExPS1dDTDk1UlUwM0Q5UEVURwACNzNHVlREWERFR0UyN00yWEpNVAADAQQBAAIjMDAwMDAwAAPIAQAFAQECIzAwMDAwMAADyAEAAAACAwA%3D</rdfs:seeAlso>
        <ns3:CLM_0010003 rdf:resource="http://purl.obolibrary.org/obo/PCL_0123119"/>
        <ns3:CLM_0010003 rdf:resource="http://purl.obolibrary.org/obo/PCL_0143839"/>
        <ns3:CLM_0010001 rdf:resource="https://purl.brain-bican.org/ontology/mbao/MBA_131"/>
        <ns3:CLM_0010001 rdf:resource="https://purl.brain-bican.org/ontology/mbao/MBA_303"/>
        <ns3:CLM_0010001 rdf:resource="https://purl.brain-bican.org/ontology/mbao/MBA_672"/>
        <ns3:CLM_0010001 rdf:resource="https://purl.brain-bican.org/ontology/mbao/MBA_703"/>
    </Class>
    


    <!-- http://purl.obolibrary.org/obo/PCL_0123119 -->

    <Class rdf:about="http://purl.obolibrary.org/obo/PCL_0123119">
        <rdfs:label>Cyp26b1,Gm26644,Ddit4l,Pou6f2 (Yao).</rdfs:label>
    </Class>
    


    <!-- http://purl.obolibrary.org/obo/PCL_0143839 -->

    <Class rdf:about="http://purl.obolibrary.org/obo/PCL_0143839">
        <rdfs:label>Col26a1,Ddit4l,Piezo2 (Yao - within subclass).</rdfs:label>
    </Class>
    


    <!-- 
    ///////////////////////////////////////////////////////////////////////////////////////
    //
    // Individuals
    //
    ///////////////////////////////////////////////////////////////////////////////////////
     -->

    


    <!-- https://purl.brain-bican.org/taxonomy/CCN20230722/CS20230722_CLUS_0239 -->

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        <rdf:type rdf:resource="http://org.semanticweb.owlapi/error#Error1"/>
        <rdf:type rdf:resource="http://purl.obolibrary.org/obo/PCL_0010001"/>
        <rdfs:label>0239 LA-BLA-BMA-PA Glut_3 CS20230722_CLUS_0239</rdfs:label>
    </NamedIndividual>
</rdf:RDF>



<!-- Generated by the OWL API (version 3.2.4.1806) http://owlapi.sourceforge.net -->



