<?xml version="1.0"?>
<?xml-stylesheet type="text/xsl" href="https://ontobee.org/ontology/view/PCL?iri=http://purl.obolibrary.org/obo/PCL_0113281"?>
<rdf:RDF xmlns="http://www.w3.org/2002/07/owl#"
     xml:base="http://www.w3.org/2002/07/owl"
     xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#"
     xmlns:owl="http://www.w3.org/2002/07/owl#"
     xmlns:oboInOwl="http://www.geneontology.org/formats/oboInOwl#"
     xmlns:xsd="http://www.w3.org/2001/XMLSchema#"
     xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#"
     xmlns:error="http://org.semanticweb.owlapi/error#"
     xmlns:CCN20230722="https://purl.brain-bican.org/taxonomy/CCN20230722/"
     xmlns:foaf="http://xmlns.com/foaf/0.1/"
     xmlns:dc="http://purl.org/dc/elements/1.1/"
     xmlns:ns3="http://purl.obolibrary.org/obo/">
    


    <!-- 
    ///////////////////////////////////////////////////////////////////////////////////////
    //
    // Annotation properties
    //
    ///////////////////////////////////////////////////////////////////////////////////////
     -->

    <AnnotationProperty rdf:about="http://www.geneontology.org/formats/oboInOwl#hasExactSynonym"/>
    <AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/IAO_0000115"/>
    <AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/IAO_0000028"/>
    <AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/CLM_0010001"/>
    <AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/CLM_0010003"/>
    


    <!-- 
    ///////////////////////////////////////////////////////////////////////////////////////
    //
    // Datatypes
    //
    ///////////////////////////////////////////////////////////////////////////////////////
     -->

    


    <!-- 
    ///////////////////////////////////////////////////////////////////////////////////////
    //
    // Object Properties
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     -->

    


    <!-- http://purl.obolibrary.org/obo/RO_0015001 -->

    <ObjectProperty rdf:about="http://purl.obolibrary.org/obo/RO_0015001">
        <rdfs:label>has exemplar data</rdfs:label>
    </ObjectProperty>
    


    <!-- 
    ///////////////////////////////////////////////////////////////////////////////////////
    //
    // Classes
    //
    ///////////////////////////////////////////////////////////////////////////////////////
     -->

    


    <!-- http://org.semanticweb.owlapi/error#Error1 -->

    <Class rdf:about="http://org.semanticweb.owlapi/error#Error1"/>
    


    <!-- http://purl.obolibrary.org/obo/CL_0000000 -->

    <Class rdf:about="http://purl.obolibrary.org/obo/CL_0000000">
        <rdfs:label>cell</rdfs:label>
    </Class>
    


    <!-- http://purl.obolibrary.org/obo/CL_0011005 -->

    <Class rdf:about="http://purl.obolibrary.org/obo/CL_0011005">
        <rdfs:label>GABAergic interneuron</rdfs:label>
    </Class>
    


    <!-- http://purl.obolibrary.org/obo/PCL_0010001 -->

    <Class rdf:about="http://purl.obolibrary.org/obo/PCL_0010001"/>
    


    <!-- http://purl.obolibrary.org/obo/PCL_0110819 -->

    <Class rdf:about="http://purl.obolibrary.org/obo/PCL_0110819">
        <rdfs:label>NDB-SI-MA-STRv Lhx8 Gaba_6 medial ganglionic eminence derived interneuron (Mmus)</rdfs:label>
    </Class>
    


    <!-- http://purl.obolibrary.org/obo/PCL_0113281 -->

    <Class rdf:about="http://purl.obolibrary.org/obo/PCL_0113281">
        <rdfs:label>NDB-SI-MA-STRv Lhx8 Gaba_6 Chrnb3 medial ganglionic eminence derived interneuron (Mmus)</rdfs:label>
        <equivalentClass>
            <Class>
                <intersectionOf rdf:parseType="Collection">
                    <rdf:Description rdf:about="http://purl.obolibrary.org/obo/CL_0000000"/>
                    <Restriction>
                        <onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0015001"/>
                        <hasValue rdf:resource="https://purl.brain-bican.org/taxonomy/CCN20230722/CS20230722_CLUS_0901"/>
                    </Restriction>
                </intersectionOf>
            </Class>
        </equivalentClass>
        <rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/CL_0011005"/>
        <rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/PCL_0110819"/>
        <rdfs:subClassOf>
            <Restriction>
                <onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0015001"/>
                <hasValue rdf:resource="https://purl.brain-bican.org/taxonomy/CCN20230722/CS20230722_CLUS_0901"/>
            </Restriction>
        </rdfs:subClassOf>
        <rdfs:comment>Warning: Despite its name, NDB-SI-MA-STRv Lhx8 Gaba_6 Chrnb3 does not have cells in diagonal band nucleus (NDB), magnocellular nucleus (MA), striatum ventral region (STRv). This assertion is based on data from registration to a reference standard common co-ordinate framework and parcelation scheme.</rdfs:comment>
        <ns3:IAO_0000115>A medial ganglionic eminence derived interneuron of the Mus musculus brain. It is distinguished from other cells in the brain by selective expression of Chrna2 (Mmus), Cav1 (Mmus), Lamc3 (Mmus). It is distinguished from other NDB-SI-MA-STRv Lhx8 Gaba_6 cells by expression of Chrnb3, Lamc3. It is GABAergic. These cells are located in the Hypothalamus, Striatum-like amygdalar nuclei, Pallidum , in or close to the regions: Substantia innominata, Bed nuclei of the stria terminalis, Central amygdalar nucleus, medial part . Reference transcriptomic data for this type can be found in the dataset/taxonomy - Yao et al. (2023), Whole Mouse Brain in cell set Cluster:0901 NDB-SI-MA-STRv Lhx8 Gaba_6.</ns3:IAO_0000115>
        <oboInOwl:hasExactSynonym>0901 NDB-SI-MA-STRv Lhx8 Gaba_6</oboInOwl:hasExactSynonym>
        <rdfs:seeAlso>https://knowledge.brain-map.org/abcatlas#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%2BDggl%2FA4SgGoeExD3ZBDJOUVRJRTdUQU1QOFBRQUhPNFAABYGvpkqB6awOgaCBR4CS1egGAAcAAAUABgEBAkNCR0MwVTMwVlY5SlBSNjBUSlUAA34AAAAEAAAIVkZPRllQRlFHUktVRFFVWjNGRgAJTFZEQkpBVzhCSTVZU1MxUVVCRwAKAAsBVExPS1dDTDk1UlUwM0Q5UEVURwACNzNHVlREWERFR0UyN00yWEpNVAADAQQBAAIjMDAwMDAwAAPIAQAFAQECIzAwMDAwMAADyAEAAAACAwA%3D</rdfs:seeAlso>
        <ns3:IAO_0000028>NDB-SI-MA-STRv Lhx8 Gaba_6 Chrnb3 (Mmus)</ns3:IAO_0000028>
        <rdfs:seeAlso>https://purl.brain-bican.org/taxonomy/CCN20230722/CS20230722_CLAS_08.h5ad</rdfs:seeAlso>
        <oboInOwl:hasExactSynonym>Chrna2 (Mmus), Cav1 (Mmus), Lamc3 (Mmus) expressing medial ganglionic eminence derived interneuron of brain (Mus musculus)</oboInOwl:hasExactSynonym>
        <ns3:CLM_0010003 rdf:resource="http://purl.obolibrary.org/obo/PCL_0123781"/>
        <ns3:CLM_0010003 rdf:resource="http://purl.obolibrary.org/obo/PCL_0144501"/>
        <ns3:CLM_0010001 rdf:resource="https://purl.brain-bican.org/ontology/mbao/MBA_1097"/>
        <ns3:CLM_0010001 rdf:resource="https://purl.brain-bican.org/ontology/mbao/MBA_278"/>
        <ns3:CLM_0010001 rdf:resource="https://purl.brain-bican.org/ontology/mbao/MBA_342"/>
        <ns3:CLM_0010001 rdf:resource="https://purl.brain-bican.org/ontology/mbao/MBA_351"/>
        <ns3:CLM_0010001 rdf:resource="https://purl.brain-bican.org/ontology/mbao/MBA_559"/>
        <ns3:CLM_0010001 rdf:resource="https://purl.brain-bican.org/ontology/mbao/MBA_803"/>
    </Class>
    


    <!-- http://purl.obolibrary.org/obo/PCL_0123781 -->

    <Class rdf:about="http://purl.obolibrary.org/obo/PCL_0123781">
        <rdfs:label>Chrna2,Cav1,Lamc3 (Yao).</rdfs:label>
    </Class>
    


    <!-- http://purl.obolibrary.org/obo/PCL_0144501 -->

    <Class rdf:about="http://purl.obolibrary.org/obo/PCL_0144501">
        <rdfs:label>Chrnb3,Lamc3 (Yao - within subclass).</rdfs:label>
    </Class>
    


    <!-- 
    ///////////////////////////////////////////////////////////////////////////////////////
    //
    // Individuals
    //
    ///////////////////////////////////////////////////////////////////////////////////////
     -->

    


    <!-- https://purl.brain-bican.org/taxonomy/CCN20230722/CS20230722_CLUS_0901 -->

    <NamedIndividual rdf:about="https://purl.brain-bican.org/taxonomy/CCN20230722/CS20230722_CLUS_0901">
        <rdf:type rdf:resource="http://org.semanticweb.owlapi/error#Error1"/>
        <rdf:type rdf:resource="http://purl.obolibrary.org/obo/PCL_0010001"/>
        <rdfs:label>0901 NDB-SI-MA-STRv Lhx8 Gaba_6 CS20230722_CLUS_0901</rdfs:label>
    </NamedIndividual>
</rdf:RDF>



<!-- Generated by the OWL API (version 3.2.4.1806) http://owlapi.sourceforge.net -->



