<?xml version="1.0"?>
<?xml-stylesheet type="text/xsl" href="https://ontobee.org/ontology/view/PCL?iri=http://purl.obolibrary.org/obo/PCL_0117059"?>
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     xml:base="http://www.w3.org/2002/07/owl"
     xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#"
     xmlns:owl="http://www.w3.org/2002/07/owl#"
     xmlns:oboInOwl="http://www.geneontology.org/formats/oboInOwl#"
     xmlns:xsd="http://www.w3.org/2001/XMLSchema#"
     xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#"
     xmlns:error="http://org.semanticweb.owlapi/error#"
     xmlns:CCN20230722="https://purl.brain-bican.org/taxonomy/CCN20230722/"
     xmlns:foaf="http://xmlns.com/foaf/0.1/"
     xmlns:dc="http://purl.org/dc/elements/1.1/"
     xmlns:ns3="http://purl.obolibrary.org/obo/">
    


    <!-- 
    ///////////////////////////////////////////////////////////////////////////////////////
    //
    // Annotation properties
    //
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     -->

    <AnnotationProperty rdf:about="http://www.geneontology.org/formats/oboInOwl#hasExactSynonym"/>
    <AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/IAO_0000115"/>
    <AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/IAO_0000028"/>
    <AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/CLM_0010001"/>
    <AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/CLM_0010003"/>
    


    <!-- 
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    //
    // Datatypes
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    <!-- 
    ///////////////////////////////////////////////////////////////////////////////////////
    //
    // Object Properties
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    <!-- http://purl.obolibrary.org/obo/RO_0015001 -->

    <ObjectProperty rdf:about="http://purl.obolibrary.org/obo/RO_0015001">
        <rdfs:label>has exemplar data</rdfs:label>
    </ObjectProperty>
    


    <!-- 
    ///////////////////////////////////////////////////////////////////////////////////////
    //
    // Classes
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    <!-- http://org.semanticweb.owlapi/error#Error1 -->

    <Class rdf:about="http://org.semanticweb.owlapi/error#Error1"/>
    


    <!-- http://purl.obolibrary.org/obo/CL_0000000 -->

    <Class rdf:about="http://purl.obolibrary.org/obo/CL_0000000">
        <rdfs:label>cell</rdfs:label>
    </Class>
    


    <!-- http://purl.obolibrary.org/obo/CL_0000617 -->

    <Class rdf:about="http://purl.obolibrary.org/obo/CL_0000617">
        <rdfs:label>GABAergic neuron</rdfs:label>
    </Class>
    


    <!-- http://purl.obolibrary.org/obo/PCL_0010001 -->

    <Class rdf:about="http://purl.obolibrary.org/obo/PCL_0010001"/>
    


    <!-- http://purl.obolibrary.org/obo/PCL_0111614 -->

    <Class rdf:about="http://purl.obolibrary.org/obo/PCL_0111614">
        <rdfs:label>CS-PRNr-PCG Tmem163 Otp Gaba_1 neuron (Mmus)</rdfs:label>
    </Class>
    


    <!-- http://purl.obolibrary.org/obo/PCL_0117059 -->

    <Class rdf:about="http://purl.obolibrary.org/obo/PCL_0117059">
        <rdfs:label>CS-PRNr-PCG Tmem163 Otp Gaba_1 Pth2r neuron (Mmus)</rdfs:label>
        <equivalentClass>
            <Class>
                <intersectionOf rdf:parseType="Collection">
                    <rdf:Description rdf:about="http://purl.obolibrary.org/obo/CL_0000000"/>
                    <Restriction>
                        <onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0015001"/>
                        <hasValue rdf:resource="https://purl.brain-bican.org/taxonomy/CCN20230722/CS20230722_CLUS_4679"/>
                    </Restriction>
                </intersectionOf>
            </Class>
        </equivalentClass>
        <rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/CL_0000617"/>
        <rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/PCL_0111614"/>
        <rdfs:subClassOf>
            <Restriction>
                <onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0015001"/>
                <hasValue rdf:resource="https://purl.brain-bican.org/taxonomy/CCN20230722/CS20230722_CLUS_4679"/>
            </Restriction>
        </rdfs:subClassOf>
        <rdfs:seeAlso>https://purl.brain-bican.org/taxonomy/CCN20230722/CS20230722_CLAS_26.h5ad</rdfs:seeAlso>
        <oboInOwl:hasExactSynonym>4679 CS-PRNr-PCG Tmem163 Otp Gaba_1</oboInOwl:hasExactSynonym>
        <rdfs:comment>Warning: Despite its name, CS-PRNr-PCG Tmem163 Otp Gaba_1 Pth2r does not have cells in superior central nucleus raphe (CS), pontine central gray (PCG). This assertion is based on data from registration to a reference standard common co-ordinate framework and parcelation scheme.</rdfs:comment>
        <ns3:IAO_0000028>CS-PRNr-PCG Tmem163 Otp Gaba_1 Pth2r (Mmus)</ns3:IAO_0000028>
        <ns3:IAO_0000115>A neuron of the Mus musculus brain. It is distinguished from other cells in the brain by selective expression of Otp (Mmus), Pth2r (Mmus), Irx2 (Mmus), Kcns3 (Mmus). It is distinguished from other CS-PRNr-PCG Tmem163 Otp Gaba_1 cells by expression of Pth2r. It is GABAergic. These cells are located in the Midbrain, Pons , in or close to the regions: Pedunculopontine nucleus, Midbrain reticular nucleus, Pontine reticular nucleus . Reference transcriptomic data for this type can be found in the dataset/taxonomy - Yao et al. (2023), Whole Mouse Brain in cell set Cluster:4679 CS-PRNr-PCG Tmem163 Otp Gaba_1.</ns3:IAO_0000115>
        <rdfs:seeAlso>https://knowledge.brain-map.org/abcatlas#AQIBQVA4Sk5ONUxZQUJHVk1HS1kxQgACUTFOQ1dXUEc2RlowRE5JWEpCUQADBAFGUzAwRFhWMFQ5UjFYOUZKNFFFAAIAAAFRWTVTOEtNTzVITEpVRjBQMDBLAAIAAAExNUJLNDdEQ0lPRjFTTExVVzlQAAIAAAFDQkdDMFUzMFZWOUpQUjYwVEpVAAIBNDY3OSBDUy1QUk5yLVBDRyBUbWVtMTYzIE90cCBHYWJhXzEAAAQBAQKBrMaOgZYVIAOEak39hFgYTQAFAAYBAQJDQkdDMFUzMFZWOUpQUjYwVEpVAAN%2BAAAABAAACEc0STRHRkpYSkI5QVRaM1BUWDEACUxWREJKQVc4Qkk1WVNTMVFVQkcACgALAW5vbmUAAm5vbmUAAwEEAQACIzAwMDAwMAADyAEABQEBAiMwMDAwMDAAA8gBAAAAAUs5Sk4yM1AyNEtRQ0dLOVU3NUEAAkhTWVpQWlcxNjY5VTgyMUJXWVAAAwQBRlMwMERYVjBUOVIxWDlGSjRRRQACAAABUVk1UzhLTU81SExKVUYwUDAwSwACAAABMTVCSzQ3RENJT0YxU0xMVVc5UAACAAABQ0JHQzBVMzBWVjlKUFI2MFRKVQACATQ2NzkgQ1MtUFJOci1QQ0cgVG1lbTE2MyBPdHAgR2FiYV8xAAAEAQAChFC%2FH4OCCX8DhKAah4TEPdkEMk5RVElFN1RBTVA4UFFBSE80UAAFga%2BmSoHprA6BoIFHgJLV6AYABwAABQAGAQECQ0JHQzBVMzBWVjlKUFI2MFRKVQADfgAAAAQAAAhWRk9GWVBGUUdSS1VEUVVaM0ZGAAlMVkRCSkFXOEJJNVlTUzFRVUJHAAoACwFUTE9LV0NMOTVSVTAzRDlQRVRHAAI3M0dWVERYREVHRTI3TTJYSk1UAAMBBAEAAiMwMDAwMDAAA8gBAAUBAQIjMDAwMDAwAAPIAQAAAAIDAA%3D%3D</rdfs:seeAlso>
        <oboInOwl:hasExactSynonym>Otp (Mmus), Pth2r (Mmus), Irx2 (Mmus), Kcns3 (Mmus) expressing neuron of brain (Mus musculus)</oboInOwl:hasExactSynonym>
        <ns3:CLM_0010003 rdf:resource="http://purl.obolibrary.org/obo/PCL_0127559"/>
        <ns3:CLM_0010003 rdf:resource="http://purl.obolibrary.org/obo/PCL_0148279"/>
        <ns3:CLM_0010001 rdf:resource="https://purl.brain-bican.org/ontology/mbao/MBA_1052"/>
        <ns3:CLM_0010001 rdf:resource="https://purl.brain-bican.org/ontology/mbao/MBA_128"/>
        <ns3:CLM_0010001 rdf:resource="https://purl.brain-bican.org/ontology/mbao/MBA_146"/>
        <ns3:CLM_0010001 rdf:resource="https://purl.brain-bican.org/ontology/mbao/MBA_313"/>
        <ns3:CLM_0010001 rdf:resource="https://purl.brain-bican.org/ontology/mbao/MBA_771"/>
    </Class>
    


    <!-- http://purl.obolibrary.org/obo/PCL_0127559 -->

    <Class rdf:about="http://purl.obolibrary.org/obo/PCL_0127559">
        <rdfs:label>Otp,Pth2r,Irx2,Kcns3 (Yao).</rdfs:label>
    </Class>
    


    <!-- http://purl.obolibrary.org/obo/PCL_0148279 -->

    <Class rdf:about="http://purl.obolibrary.org/obo/PCL_0148279">
        <rdfs:label>Pth2r 2 (Yao - within subclass).</rdfs:label>
    </Class>
    


    <!-- 
    ///////////////////////////////////////////////////////////////////////////////////////
    //
    // Individuals
    //
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     -->

    


    <!-- https://purl.brain-bican.org/taxonomy/CCN20230722/CS20230722_CLUS_4679 -->

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        <rdf:type rdf:resource="http://org.semanticweb.owlapi/error#Error1"/>
        <rdf:type rdf:resource="http://purl.obolibrary.org/obo/PCL_0010001"/>
        <rdfs:label>4679 CS-PRNr-PCG Tmem163 Otp Gaba_1 CS20230722_CLUS_4679</rdfs:label>
    </NamedIndividual>
</rdf:RDF>



<!-- Generated by the OWL API (version 3.2.4.1806) http://owlapi.sourceforge.net -->



