exemplar data of Cluster (Mouse Vip)-like primary motor cortex GABAergic interneuron (Hsap) RNAseq 019-039 - CS201912131_130 {"cell_set_preferred_alias": "(Mouse Vip)-like", "cell_set_label": "RNAseq 019-039", "cell_set_accession": "CS201912131_130", "cell_set_aligned_alias": "Vip", "cell_set_additional_aliases": "", "cell_set_alias_assignee": "Nikolas Jorstad", "cell_set_alias_citation": "PMID:34616062", "cell_set_structure": "primary motor cortex", "cell_set_ontology_tag": "UBERON:0001384", "species": "Human", "modality": "RNAseq", "taxonomy_id": "CCN201912131", "taxonomy_description": "Human M1 transcriptomics taxonomy", "child_cell_set_accessions": "CS201912131_19|CS201912131_20|CS201912131_21|CS201912131_22|CS201912131_23|CS201912131_24|CS201912131_25|CS201912131_26|CS201912131_27|CS201912131_28|CS201912131_29|CS201912131_30|CS201912131_31|CS201912131_32|CS201912131_33|CS201912131_34|CS201912131_35|CS201912131_36|CS201912131_37|CS201912131_38|CS201912131_39", "cell_type_card": "Subclass", "original_label": "n24", "cell_set_color": "#B864CC"} Vip Vip n24 (Mouse Vip)-like Vip CS201912131_130 Vip is: CGE/PoA-derived GABAergic subclass typically expressing Vip. In Human primary motor cortex (CCN201912131), Vip has 21 child types: Inh L1-3 VIP CBLN1, Inh L1-2 VIP EXPH5, Inh L1-3 VIP HSPB6, Inh L1-2 VIP PTGER3, Inh L1-2 VIP SCML4, Inh L1-3 VIP FNDC1, Inh L1-3 VIP CHRNA2, Inh L2 VIP SLC6A16, Inh L1 VIP KLHDC8B, Inh L3-5 VIP IGDCC3, Inh L1-5 VIP SMOC1, Inh L3-5 VIP HS3ST3A1, Inh L5-6 VIP COL4A3, Inh L1-5 VIP CD27-AS1, Inh L2-5 VIP BSPRY, Inh L2-5 VIP SOX11, Inh L3-6 VIP ZIM2-AS1, Inh L1-5 VIP PHLDB3, Inh L1-5 VIP LINC01013, Inh L3-6 VIP UG0898H09 and Inh L3-5 VIP TAC3. The minimal set of markers required to distinguish this cell type from other cell types in the primary motor cortex is VIP (F-beta = 0.886), based on the NS Forest method of marker gene selection. Vip cells represent 21.46% of all GABAergic cells collected in the Human M1 10Xv3 dataset. Vip cells have an average of 4248 genes detected, which is 430 less than the average for all GABAergic cells (4678). PMID:34616062 Subclass Nikolas Jorstad (Mouse Vip)-like RNAseq 019-039 RNAseq 007-039 - CS201912131_189