<?xml version="1.0"?>
<?xml-stylesheet type="text/xsl" href="https://ontobee.org/ontology/view/PCL?iri=http://purl.obolibrary.org/obo/pcl/CS201912131_89"?>
<rdf:RDF xmlns="http://www.w3.org/2002/07/owl#"
     xml:base="http://www.w3.org/2002/07/owl"
     xmlns:ns5="http://purl.obolibrary.org/obo/"
     xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#"
     xmlns:owl="http://www.w3.org/2002/07/owl#"
     xmlns:oboInOwl="http://www.geneontology.org/formats/oboInOwl#"
     xmlns:pcl="http://purl.obolibrary.org/obo/pcl/"
     xmlns:xsd="http://www.w3.org/2001/XMLSchema#"
     xmlns:skos="http://www.w3.org/2004/02/skos/core#"
     xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#"
     xmlns:error="http://org.semanticweb.owlapi/error#"
     xmlns:ns4="http://n2o.neo/custom/"
     xmlns:foaf="http://xmlns.com/foaf/0.1/"
     xmlns:dc="http://purl.org/dc/elements/1.1/">
    


    <!-- 
    ///////////////////////////////////////////////////////////////////////////////////////
    //
    // Annotation properties
    //
    ///////////////////////////////////////////////////////////////////////////////////////
     -->

    <AnnotationProperty rdf:about="http://n2o.neo/custom/cell_set_preferred_alias"/>
    <AnnotationProperty rdf:about="http://n2o.neo/custom/cell_set_alias_citation"/>
    <AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/PCL_0010051"/>
    <AnnotationProperty rdf:about="http://www.w3.org/2004/02/skos/core#prefLabel"/>
    <AnnotationProperty rdf:about="http://n2o.neo/custom/original_label"/>
    <AnnotationProperty rdf:about="http://n2o.neo/custom/cell_set_label"/>
    <AnnotationProperty rdf:about="http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym"/>
    <AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/RO_0015003"/>
    <AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/PCL_0010059"/>
    <AnnotationProperty rdf:about="http://n2o.neo/custom/node_metadata"/>
    <AnnotationProperty rdf:about="http://n2o.neo/custom/cell_set_alias_assignee"/>
    


    <!-- 
    ///////////////////////////////////////////////////////////////////////////////////////
    //
    // Datatypes
    //
    ///////////////////////////////////////////////////////////////////////////////////////
     -->

    


    <!-- 
    ///////////////////////////////////////////////////////////////////////////////////////
    //
    // Object Properties
    //
    ///////////////////////////////////////////////////////////////////////////////////////
     -->

    


    <!-- http://purl.obolibrary.org/obo/RO_0015002 -->

    <ObjectProperty rdf:about="http://purl.obolibrary.org/obo/RO_0015002">
        <rdfs:label>exemplar data of</rdfs:label>
    </ObjectProperty>
    


    <!-- 
    ///////////////////////////////////////////////////////////////////////////////////////
    //
    // Classes
    //
    ///////////////////////////////////////////////////////////////////////////////////////
     -->

    


    <!-- http://org.semanticweb.owlapi/error#Error1 -->

    <Class rdf:about="http://org.semanticweb.owlapi/error#Error1"/>
    


    <!-- http://purl.obolibrary.org/obo/PCL_0010001 -->

    <Class rdf:about="http://purl.obolibrary.org/obo/PCL_0010001">
        <rdfs:label>Cluster</rdfs:label>
    </Class>
    


    <!-- http://purl.obolibrary.org/obo/PCL_0015089 -->

    <Class rdf:about="http://purl.obolibrary.org/obo/PCL_0015089">
        <rdfs:label>Exc L5-6 THEMIS TNFAIP6 primary motor cortex glutamatergic neuron (Hsap)</rdfs:label>
    </Class>
    


    <!-- 
    ///////////////////////////////////////////////////////////////////////////////////////
    //
    // Individuals
    //
    ///////////////////////////////////////////////////////////////////////////////////////
     -->

    


    <!-- http://purl.obolibrary.org/obo/pcl/CS201912131_174 -->

    <NamedIndividual rdf:about="http://purl.obolibrary.org/obo/pcl/CS201912131_174">
        <rdf:type rdf:resource="http://org.semanticweb.owlapi/error#Error1"/>
        <rdf:type rdf:resource="http://purl.obolibrary.org/obo/PCL_0010001"/>
        <rdfs:label>RNAseq 088, 095 - CS201912131_174</rdfs:label>
    </NamedIndividual>
    


    <!-- http://purl.obolibrary.org/obo/pcl/CS201912131_257 -->

    <NamedIndividual rdf:about="http://purl.obolibrary.org/obo/pcl/CS201912131_257">
        <rdf:type rdf:resource="http://purl.obolibrary.org/obo/PCL_0010001"/>
        <rdfs:label>RNAseq 087-090 - CS201912131_257</rdfs:label>
    </NamedIndividual>
    


    <!-- http://purl.obolibrary.org/obo/pcl/CS201912131_258 -->

    <NamedIndividual rdf:about="http://purl.obolibrary.org/obo/pcl/CS201912131_258">
        <rdf:type rdf:resource="http://purl.obolibrary.org/obo/PCL_0010001"/>
        <rdfs:label>RNAseq 087-088 - CS201912131_258</rdfs:label>
    </NamedIndividual>
    


    <!-- http://purl.obolibrary.org/obo/pcl/CS201912131_89 -->

    <NamedIndividual rdf:about="http://purl.obolibrary.org/obo/pcl/CS201912131_89">
        <rdf:type rdf:resource="http://purl.obolibrary.org/obo/PCL_0010001"/>
        <rdf:type>
            <Restriction>
                <onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0015002"/>
                <someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/PCL_0015089"/>
            </Restriction>
        </rdf:type>
        <rdfs:label>RNAseq 088 - CS201912131_89</rdfs:label>
        <ns4:original_label>Exc L5-6 THEMIS TNFAIP6</ns4:original_label>
        <ns4:node_metadata>{&quot;cell_set_preferred_alias&quot;: &quot;Exc L5-6 THEMIS TNFAIP6&quot;, &quot;cell_set_label&quot;: &quot;RNAseq 088&quot;, &quot;cell_set_accession&quot;: &quot;CS201912131_89&quot;, &quot;cell_set_aligned_alias&quot;: &quot;&quot;, &quot;cell_set_additional_aliases&quot;: &quot;&quot;, &quot;cell_set_alias_assignee&quot;: &quot;Nikolas Jorstad&quot;, &quot;cell_set_alias_citation&quot;: &quot;PMID:34616062&quot;, &quot;cell_set_structure&quot;: &quot;primary motor cortex&quot;, &quot;cell_set_ontology_tag&quot;: &quot;UBERON:0001384&quot;, &quot;species&quot;: &quot;Human&quot;, &quot;modality&quot;: &quot;RNAseq&quot;, &quot;taxonomy_id&quot;: &quot;CCN201912131&quot;, &quot;taxonomy_description&quot;: &quot;Human M1 transcriptomics taxonomy&quot;, &quot;child_cell_set_accessions&quot;: &quot;&quot;, &quot;cell_type_card&quot;: &quot;Cell Type&quot;, &quot;original_label&quot;: &quot;Exc L5-6 THEMIS TNFAIP6&quot;, &quot;cell_set_color&quot;: &quot;#5FC5B6&quot;}</ns4:node_metadata>
        <ns4:cell_set_alias_assignee>Nikolas Jorstad</ns4:cell_set_alias_assignee>
        <ns5:PCL_0010059>CS201912131_89</ns5:PCL_0010059>
        <ns4:cell_set_label>RNAseq 088</ns4:cell_set_label>
        <skos:prefLabel>Exc L5-6 THEMIS TNFAIP6</skos:prefLabel>
        <oboInOwl:hasRelatedSynonym>Exc L5-6 THEMIS TNFAIP6</oboInOwl:hasRelatedSynonym>
        <ns4:cell_set_preferred_alias>Exc L5-6 THEMIS TNFAIP6</ns4:cell_set_preferred_alias>
        <ns4:cell_set_alias_citation>PMID:34616062</ns4:cell_set_alias_citation>
        <rdfs:comment>In Human primary motor cortex (CCN201912131), Exc L5-6 THEMIS TNFAIP6 is a member of the L5 IT subclass. The minimal set of markers required to distinguish this cell type from other cell types in the primary motor cortex is LOC105373893 and LOC105378031 and LTBP1 and TSHZ2 (F-beta = 0.455), based on the NS Forest method of marker gene selection. Exc L5-6 THEMIS TNFAIP6 cells represent 8.18% of all L5 IT cells collected in the Human M1 10Xv3 dataset. Exc L5-6 THEMIS TNFAIP6 cells have an average of 6158 genes detected, which is 173 less than the average for all L5 IT cells (6331).</rdfs:comment>
        <ns5:PCL_0010051>Cell Type</ns5:PCL_0010051>
        <ns5:RO_0015003 rdf:resource="http://purl.obolibrary.org/obo/pcl/CS201912131_174"/>
        <ns5:RO_0015003 rdf:resource="http://purl.obolibrary.org/obo/pcl/CS201912131_257"/>
        <ns5:RO_0015003 rdf:resource="http://purl.obolibrary.org/obo/pcl/CS201912131_258"/>
    </NamedIndividual>
</rdf:RDF>



<!-- Generated by the OWL API (version 3.2.4.1806) http://owlapi.sourceforge.net -->



