<?xml version="1.0"?>
<?xml-stylesheet type="text/xsl" href="https://ontobee.org/ontology/view/PCL?iri=http://purl.obolibrary.org/obo/pcl/CS201912132_108"?>
<rdf:RDF xmlns="http://www.w3.org/2002/07/owl#"
     xml:base="http://www.w3.org/2002/07/owl"
     xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#"
     xmlns:owl="http://www.w3.org/2002/07/owl#"
     xmlns:oboInOwl="http://www.geneontology.org/formats/oboInOwl#"
     xmlns:pcl="http://purl.obolibrary.org/obo/pcl/"
     xmlns:xsd="http://www.w3.org/2001/XMLSchema#"
     xmlns:skos="http://www.w3.org/2004/02/skos/core#"
     xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#"
     xmlns:ns4="http://purl.obolibrary.org/obo/"
     xmlns:foaf="http://xmlns.com/foaf/0.1/"
     xmlns:dc="http://purl.org/dc/elements/1.1/"
     xmlns:ns3="http://n2o.neo/custom/">
    


    <!-- 
    ///////////////////////////////////////////////////////////////////////////////////////
    //
    // Annotation properties
    //
    ///////////////////////////////////////////////////////////////////////////////////////
     -->

    <AnnotationProperty rdf:about="http://n2o.neo/custom/cell_set_preferred_alias"/>
    <AnnotationProperty rdf:about="http://n2o.neo/custom/cell_set_alias_citation"/>
    <AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/PCL_0010051"/>
    <AnnotationProperty rdf:about="http://www.w3.org/2004/02/skos/core#prefLabel"/>
    <AnnotationProperty rdf:about="http://n2o.neo/custom/original_label"/>
    <AnnotationProperty rdf:about="http://n2o.neo/custom/cell_set_aligned_alias"/>
    <AnnotationProperty rdf:about="http://n2o.neo/custom/cell_set_label"/>
    <AnnotationProperty rdf:about="http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym"/>
    <AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/RO_0015003"/>
    <AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/PCL_0010059"/>
    <AnnotationProperty rdf:about="http://n2o.neo/custom/cell_set_additional_aliases"/>
    <AnnotationProperty rdf:about="http://www.geneontology.org/formats/oboInOwl#hasExactSynonym"/>
    <AnnotationProperty rdf:about="http://n2o.neo/custom/node_metadata"/>
    <AnnotationProperty rdf:about="http://n2o.neo/custom/cell_set_alias_assignee"/>
    


    <!-- 
    ///////////////////////////////////////////////////////////////////////////////////////
    //
    // Datatypes
    //
    ///////////////////////////////////////////////////////////////////////////////////////
     -->

    


    <!-- 
    ///////////////////////////////////////////////////////////////////////////////////////
    //
    // Classes
    //
    ///////////////////////////////////////////////////////////////////////////////////////
     -->

    


    <!-- http://purl.obolibrary.org/obo/PCL_0010001 -->

    <Class rdf:about="http://purl.obolibrary.org/obo/PCL_0010001">
        <rdfs:label>Cluster</rdfs:label>
    </Class>
    


    <!-- 
    ///////////////////////////////////////////////////////////////////////////////////////
    //
    // Individuals
    //
    ///////////////////////////////////////////////////////////////////////////////////////
     -->

    


    <!-- http://purl.obolibrary.org/obo/pcl/CS201912132_108 -->

    <NamedIndividual rdf:about="http://purl.obolibrary.org/obo/pcl/CS201912132_108">
        <rdf:type rdf:resource="http://purl.obolibrary.org/obo/PCL_0010001"/>
        <rdfs:label>RNAseq 88-89 - CS201912132_108</rdfs:label>
        <oboInOwl:hasRelatedSynonym>Peri</oboInOwl:hasRelatedSynonym>
        <ns3:cell_set_label>RNAseq 88-89</ns3:cell_set_label>
        <skos:prefLabel>Peri</skos:prefLabel>
        <ns3:node_metadata>{&quot;cell_set_preferred_alias&quot;: &quot;Peri&quot;, &quot;cell_set_label&quot;: &quot;RNAseq 88-89&quot;, &quot;cell_set_accession&quot;: &quot;CS201912132_108&quot;, &quot;cell_set_aligned_alias&quot;: &quot;Pericyte&quot;, &quot;cell_set_additional_aliases&quot;: &quot;Peri&quot;, &quot;cell_set_alias_assignee&quot;: &quot;Fenna Krienen&quot;, &quot;cell_set_alias_citation&quot;: &quot;PMID:34616062&quot;, &quot;cell_set_structure&quot;: &quot;primary motor cortex&quot;, &quot;cell_set_ontology_tag&quot;: &quot;UBERON:0001384&quot;, &quot;species&quot;: &quot;Marmoset&quot;, &quot;modality&quot;: &quot;RNAseq&quot;, &quot;taxonomy_id&quot;: &quot;CCN201912132&quot;, &quot;taxonomy_description&quot;: &quot;Marmoset M1 taxonomy using 10X data&quot;, &quot;child_cell_set_accessions&quot;: &quot;CS201912132_88|CS201912132_89&quot;, &quot;cell_type_card&quot;: &quot;Subclass&quot;, &quot;original_label&quot;: &quot;n90&quot;, &quot;cell_set_color&quot;: &quot;#A77C70&quot;}</ns3:node_metadata>
        <ns3:cell_set_additional_aliases>Peri</ns3:cell_set_additional_aliases>
        <ns3:cell_set_alias_assignee>Fenna Krienen</ns3:cell_set_alias_assignee>
        <oboInOwl:hasExactSynonym>Peri</oboInOwl:hasExactSynonym>
        <ns3:cell_set_preferred_alias>Peri</ns3:cell_set_preferred_alias>
        <ns3:cell_set_aligned_alias>Pericyte</ns3:cell_set_aligned_alias>
        <ns4:PCL_0010051>Subclass</ns4:PCL_0010051>
        <ns3:original_label>n90</ns3:original_label>
        <rdfs:comment>Peri is: pericytes. In Marmoset primary motor cortex (CCN201912132), Peri has 2 child types: Peri SLC1A3 CHST3 and Peri SLC1A3 EPSTI1. The minimal set of markers required to distinguish this cell type from other cell types in the primary motor cortex is CPM and LOC100405319 (F-beta = 0.723), based on the NS Forest method of marker gene selection. Peri cells represent 10.03% of all Non-Neural cells collected in the marmoset M1 10Xv3 dataset. Peri cells have an average of 1768 genes detected, which is 404 less than the average for all Non-Neural cells (2172).</rdfs:comment>
        <ns3:cell_set_alias_citation>PMID:34616062</ns3:cell_set_alias_citation>
        <oboInOwl:hasExactSynonym>Pericyte</oboInOwl:hasExactSynonym>
        <ns4:PCL_0010059>CS201912132_108</ns4:PCL_0010059>
        <ns4:RO_0015003 rdf:resource="http://purl.obolibrary.org/obo/pcl/CS201912132_207"/>
    </NamedIndividual>
    


    <!-- http://purl.obolibrary.org/obo/pcl/CS201912132_207 -->

    <NamedIndividual rdf:about="http://purl.obolibrary.org/obo/pcl/CS201912132_207">
        <rdf:type rdf:resource="http://purl.obolibrary.org/obo/PCL_0010001"/>
        <rdfs:label>RNAseq 85-89 - CS201912132_207</rdfs:label>
    </NamedIndividual>
</rdf:RDF>



<!-- Generated by the OWL API (version 3.2.4.1806) http://owlapi.sourceforge.net -->



