<?xml version="1.0"?>
<?xml-stylesheet type="text/xsl" href="https://ontobee.org/ontology/view/PCL?iri=http://purl.obolibrary.org/obo/pcl/CS201912132_14"?>
<rdf:RDF xmlns="http://www.w3.org/2002/07/owl#"
     xml:base="http://www.w3.org/2002/07/owl"
     xmlns:ns5="http://purl.obolibrary.org/obo/"
     xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#"
     xmlns:owl="http://www.w3.org/2002/07/owl#"
     xmlns:oboInOwl="http://www.geneontology.org/formats/oboInOwl#"
     xmlns:pcl="http://purl.obolibrary.org/obo/pcl/"
     xmlns:xsd="http://www.w3.org/2001/XMLSchema#"
     xmlns:skos="http://www.w3.org/2004/02/skos/core#"
     xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#"
     xmlns:error="http://org.semanticweb.owlapi/error#"
     xmlns:ns4="http://n2o.neo/custom/"
     xmlns:foaf="http://xmlns.com/foaf/0.1/"
     xmlns:dc="http://purl.org/dc/elements/1.1/">
    


    <!-- 
    ///////////////////////////////////////////////////////////////////////////////////////
    //
    // Annotation properties
    //
    ///////////////////////////////////////////////////////////////////////////////////////
     -->

    <AnnotationProperty rdf:about="http://n2o.neo/custom/cell_set_preferred_alias"/>
    <AnnotationProperty rdf:about="http://n2o.neo/custom/cell_set_alias_citation"/>
    <AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/PCL_0010051"/>
    <AnnotationProperty rdf:about="http://www.w3.org/2004/02/skos/core#prefLabel"/>
    <AnnotationProperty rdf:about="http://n2o.neo/custom/original_label"/>
    <AnnotationProperty rdf:about="http://n2o.neo/custom/cell_set_label"/>
    <AnnotationProperty rdf:about="http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym"/>
    <AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/RO_0015003"/>
    <AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/PCL_0010059"/>
    <AnnotationProperty rdf:about="http://n2o.neo/custom/node_metadata"/>
    <AnnotationProperty rdf:about="http://n2o.neo/custom/cell_set_alias_assignee"/>
    


    <!-- 
    ///////////////////////////////////////////////////////////////////////////////////////
    //
    // Datatypes
    //
    ///////////////////////////////////////////////////////////////////////////////////////
     -->

    


    <!-- 
    ///////////////////////////////////////////////////////////////////////////////////////
    //
    // Object Properties
    //
    ///////////////////////////////////////////////////////////////////////////////////////
     -->

    


    <!-- http://purl.obolibrary.org/obo/RO_0015002 -->

    <ObjectProperty rdf:about="http://purl.obolibrary.org/obo/RO_0015002">
        <rdfs:label>exemplar data of</rdfs:label>
    </ObjectProperty>
    


    <!-- 
    ///////////////////////////////////////////////////////////////////////////////////////
    //
    // Classes
    //
    ///////////////////////////////////////////////////////////////////////////////////////
     -->

    


    <!-- http://org.semanticweb.owlapi/error#Error1 -->

    <Class rdf:about="http://org.semanticweb.owlapi/error#Error1"/>
    


    <!-- http://purl.obolibrary.org/obo/PCL_0010001 -->

    <Class rdf:about="http://purl.obolibrary.org/obo/PCL_0010001">
        <rdfs:label>Cluster</rdfs:label>
    </Class>
    


    <!-- http://purl.obolibrary.org/obo/PCL_0019014 -->

    <Class rdf:about="http://purl.obolibrary.org/obo/PCL_0019014">
        <rdfs:label>Inh GAD1 LOC108589948 primary motor cortex GABAergic interneuron (Cjac)</rdfs:label>
    </Class>
    


    <!-- 
    ///////////////////////////////////////////////////////////////////////////////////////
    //
    // Individuals
    //
    ///////////////////////////////////////////////////////////////////////////////////////
     -->

    


    <!-- http://purl.obolibrary.org/obo/pcl/CS201912132_123 -->

    <NamedIndividual rdf:about="http://purl.obolibrary.org/obo/pcl/CS201912132_123">
        <rdf:type rdf:resource="http://org.semanticweb.owlapi/error#Error1"/>
        <rdf:type rdf:resource="http://purl.obolibrary.org/obo/PCL_0010001"/>
        <rdfs:label>RNAseq 13-14 - CS201912132_123</rdfs:label>
    </NamedIndividual>
    


    <!-- http://purl.obolibrary.org/obo/pcl/CS201912132_14 -->

    <NamedIndividual rdf:about="http://purl.obolibrary.org/obo/pcl/CS201912132_14">
        <rdf:type rdf:resource="http://purl.obolibrary.org/obo/PCL_0010001"/>
        <rdf:type>
            <Restriction>
                <onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0015002"/>
                <someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/PCL_0019014"/>
            </Restriction>
        </rdf:type>
        <rdfs:label>RNAseq 14 - CS201912132_14</rdfs:label>
        <ns4:node_metadata>{&quot;cell_set_preferred_alias&quot;: &quot;Inh GAD1 LOC108589948&quot;, &quot;cell_set_label&quot;: &quot;RNAseq 14&quot;, &quot;cell_set_accession&quot;: &quot;CS201912132_14&quot;, &quot;cell_set_aligned_alias&quot;: &quot;&quot;, &quot;cell_set_additional_aliases&quot;: &quot;&quot;, &quot;cell_set_alias_assignee&quot;: &quot;Fenna Krienen&quot;, &quot;cell_set_alias_citation&quot;: &quot;PMID:34616062&quot;, &quot;cell_set_structure&quot;: &quot;primary motor cortex&quot;, &quot;cell_set_ontology_tag&quot;: &quot;UBERON:0001384&quot;, &quot;species&quot;: &quot;Marmoset&quot;, &quot;modality&quot;: &quot;RNAseq&quot;, &quot;taxonomy_id&quot;: &quot;CCN201912132&quot;, &quot;taxonomy_description&quot;: &quot;Marmoset M1 taxonomy using 10X data&quot;, &quot;child_cell_set_accessions&quot;: &quot;&quot;, &quot;cell_type_card&quot;: &quot;Cell Type&quot;, &quot;original_label&quot;: &quot;Inh GAD1 LOC108589948&quot;, &quot;cell_set_color&quot;: &quot;#881FA8&quot;}</ns4:node_metadata>
        <ns4:cell_set_label>RNAseq 14</ns4:cell_set_label>
        <rdfs:comment>In Marmoset primary motor cortex (CCN201912132), Inh GAD1 LOC108589948 is a member of the Sncg subclass. The minimal set of markers required to distinguish this cell type from other cell types in the primary motor cortex is LOC108589948 and THSD7B (F-beta = 0.556), based on the NS Forest method of marker gene selection. Inh GAD1 LOC108589948 cells represent 34.58% of all Sncg cells collected in the marmoset M1 10Xv3 dataset. Inh GAD1 LOC108589948 cells have an average of 3113 genes detected, which is 217 less than the average for all Sncg cells (3330).</rdfs:comment>
        <oboInOwl:hasRelatedSynonym>Inh GAD1 LOC108589948</oboInOwl:hasRelatedSynonym>
        <ns4:cell_set_alias_citation>PMID:34616062</ns4:cell_set_alias_citation>
        <ns4:original_label>Inh GAD1 LOC108589948</ns4:original_label>
        <ns5:PCL_0010051>Cell Type</ns5:PCL_0010051>
        <ns4:cell_set_preferred_alias>Inh GAD1 LOC108589948</ns4:cell_set_preferred_alias>
        <ns4:cell_set_alias_assignee>Fenna Krienen</ns4:cell_set_alias_assignee>
        <skos:prefLabel>Inh GAD1 LOC108589948</skos:prefLabel>
        <ns5:PCL_0010059>CS201912132_14</ns5:PCL_0010059>
        <ns5:RO_0015003 rdf:resource="http://purl.obolibrary.org/obo/pcl/CS201912132_123"/>
    </NamedIndividual>
</rdf:RDF>



<!-- Generated by the OWL API (version 3.2.4.1806) http://owlapi.sourceforge.net -->



