<?xml version="1.0"?>
<?xml-stylesheet type="text/xsl" href="https://ontobee.org/ontology/view/PCL?iri=http://purl.obolibrary.org/obo/pcl/CS201912132_58"?>
<rdf:RDF xmlns="http://www.w3.org/2002/07/owl#"
     xml:base="http://www.w3.org/2002/07/owl"
     xmlns:ns5="http://purl.obolibrary.org/obo/"
     xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#"
     xmlns:owl="http://www.w3.org/2002/07/owl#"
     xmlns:oboInOwl="http://www.geneontology.org/formats/oboInOwl#"
     xmlns:pcl="http://purl.obolibrary.org/obo/pcl/"
     xmlns:xsd="http://www.w3.org/2001/XMLSchema#"
     xmlns:skos="http://www.w3.org/2004/02/skos/core#"
     xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#"
     xmlns:error="http://org.semanticweb.owlapi/error#"
     xmlns:ns4="http://n2o.neo/custom/"
     xmlns:foaf="http://xmlns.com/foaf/0.1/"
     xmlns:dc="http://purl.org/dc/elements/1.1/">
    


    <!-- 
    ///////////////////////////////////////////////////////////////////////////////////////
    //
    // Annotation properties
    //
    ///////////////////////////////////////////////////////////////////////////////////////
     -->

    <AnnotationProperty rdf:about="http://n2o.neo/custom/cell_set_preferred_alias"/>
    <AnnotationProperty rdf:about="http://n2o.neo/custom/cell_set_alias_citation"/>
    <AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/PCL_0010051"/>
    <AnnotationProperty rdf:about="http://www.w3.org/2004/02/skos/core#prefLabel"/>
    <AnnotationProperty rdf:about="http://n2o.neo/custom/original_label"/>
    <AnnotationProperty rdf:about="http://n2o.neo/custom/cell_set_label"/>
    <AnnotationProperty rdf:about="http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym"/>
    <AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/RO_0015003"/>
    <AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/PCL_0010059"/>
    <AnnotationProperty rdf:about="http://n2o.neo/custom/node_metadata"/>
    <AnnotationProperty rdf:about="http://n2o.neo/custom/cell_set_alias_assignee"/>
    


    <!-- 
    ///////////////////////////////////////////////////////////////////////////////////////
    //
    // Datatypes
    //
    ///////////////////////////////////////////////////////////////////////////////////////
     -->

    


    <!-- 
    ///////////////////////////////////////////////////////////////////////////////////////
    //
    // Object Properties
    //
    ///////////////////////////////////////////////////////////////////////////////////////
     -->

    


    <!-- http://purl.obolibrary.org/obo/RO_0015002 -->

    <ObjectProperty rdf:about="http://purl.obolibrary.org/obo/RO_0015002">
        <rdfs:label>exemplar data of</rdfs:label>
    </ObjectProperty>
    


    <!-- 
    ///////////////////////////////////////////////////////////////////////////////////////
    //
    // Classes
    //
    ///////////////////////////////////////////////////////////////////////////////////////
     -->

    


    <!-- http://org.semanticweb.owlapi/error#Error1 -->

    <Class rdf:about="http://org.semanticweb.owlapi/error#Error1"/>
    


    <!-- http://purl.obolibrary.org/obo/PCL_0010001 -->

    <Class rdf:about="http://purl.obolibrary.org/obo/PCL_0010001">
        <rdfs:label>Cluster</rdfs:label>
    </Class>
    


    <!-- http://purl.obolibrary.org/obo/PCL_0019058 -->

    <Class rdf:about="http://purl.obolibrary.org/obo/PCL_0019058">
        <rdfs:label>Exc RORB CAV3 primary motor cortex glutamatergic neuron (Cjac)</rdfs:label>
    </Class>
    


    <!-- 
    ///////////////////////////////////////////////////////////////////////////////////////
    //
    // Individuals
    //
    ///////////////////////////////////////////////////////////////////////////////////////
     -->

    


    <!-- http://purl.obolibrary.org/obo/pcl/CS201912132_130 -->

    <NamedIndividual rdf:about="http://purl.obolibrary.org/obo/pcl/CS201912132_130">
        <rdf:type rdf:resource="http://org.semanticweb.owlapi/error#Error1"/>
        <rdf:type rdf:resource="http://purl.obolibrary.org/obo/PCL_0010001"/>
        <rdfs:label>RNAseq 57-58, 61-64 - CS201912132_130</rdfs:label>
    </NamedIndividual>
    


    <!-- http://purl.obolibrary.org/obo/pcl/CS201912132_193 -->

    <NamedIndividual rdf:about="http://purl.obolibrary.org/obo/pcl/CS201912132_193">
        <rdf:type rdf:resource="http://purl.obolibrary.org/obo/PCL_0010001"/>
        <rdfs:label>RNAseq 53-58 - CS201912132_193</rdfs:label>
    </NamedIndividual>
    


    <!-- http://purl.obolibrary.org/obo/pcl/CS201912132_58 -->

    <NamedIndividual rdf:about="http://purl.obolibrary.org/obo/pcl/CS201912132_58">
        <rdf:type rdf:resource="http://purl.obolibrary.org/obo/PCL_0010001"/>
        <rdf:type>
            <Restriction>
                <onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0015002"/>
                <someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/PCL_0019058"/>
            </Restriction>
        </rdf:type>
        <rdfs:label>RNAseq 58 - CS201912132_58</rdfs:label>
        <skos:prefLabel>Exc RORB CAV3</skos:prefLabel>
        <ns4:cell_set_label>RNAseq 58</ns4:cell_set_label>
        <ns4:node_metadata>{&quot;cell_set_preferred_alias&quot;: &quot;Exc RORB CAV3&quot;, &quot;cell_set_label&quot;: &quot;RNAseq 58&quot;, &quot;cell_set_accession&quot;: &quot;CS201912132_58&quot;, &quot;cell_set_aligned_alias&quot;: &quot;&quot;, &quot;cell_set_additional_aliases&quot;: &quot;&quot;, &quot;cell_set_alias_assignee&quot;: &quot;Fenna Krienen&quot;, &quot;cell_set_alias_citation&quot;: &quot;PMID:34616062&quot;, &quot;cell_set_structure&quot;: &quot;primary motor cortex&quot;, &quot;cell_set_ontology_tag&quot;: &quot;UBERON:0001384&quot;, &quot;species&quot;: &quot;Marmoset&quot;, &quot;modality&quot;: &quot;RNAseq&quot;, &quot;taxonomy_id&quot;: &quot;CCN201912132&quot;, &quot;taxonomy_description&quot;: &quot;Marmoset M1 taxonomy using 10X data&quot;, &quot;child_cell_set_accessions&quot;: &quot;&quot;, &quot;cell_type_card&quot;: &quot;Cell Type&quot;, &quot;original_label&quot;: &quot;Exc RORB CAV3&quot;, &quot;cell_set_color&quot;: &quot;#6EEEE3&quot;}</ns4:node_metadata>
        <rdfs:comment>In Marmoset primary motor cortex (CCN201912132), Exc RORB CAV3 is a member of the L5 IT subclass. The minimal set of markers required to distinguish this cell type from other cell types in the primary motor cortex is LOC100408486 (F-beta = 0.341), based on the NS Forest method of marker gene selection. Exc RORB CAV3 cells represent 1.8% of all L5 IT cells collected in the marmoset M1 10Xv3 dataset. Exc RORB CAV3 cells have an average of 3773 genes detected, which is 556 less than the average for all L5 IT cells (4329).</rdfs:comment>
        <ns4:cell_set_alias_citation>PMID:34616062</ns4:cell_set_alias_citation>
        <ns4:cell_set_preferred_alias>Exc RORB CAV3</ns4:cell_set_preferred_alias>
        <oboInOwl:hasRelatedSynonym>Exc RORB CAV3</oboInOwl:hasRelatedSynonym>
        <ns5:PCL_0010051>Cell Type</ns5:PCL_0010051>
        <ns4:original_label>Exc RORB CAV3</ns4:original_label>
        <ns4:cell_set_alias_assignee>Fenna Krienen</ns4:cell_set_alias_assignee>
        <ns5:PCL_0010059>CS201912132_58</ns5:PCL_0010059>
        <ns5:RO_0015003 rdf:resource="http://purl.obolibrary.org/obo/pcl/CS201912132_130"/>
        <ns5:RO_0015003 rdf:resource="http://purl.obolibrary.org/obo/pcl/CS201912132_193"/>
    </NamedIndividual>
</rdf:RDF>



<!-- Generated by the OWL API (version 3.2.4.1806) http://owlapi.sourceforge.net -->



