exemplar data of Cluster Lamp5-like Pax6 primary motor cortex GABAergic interneuron (Mmus) RNAseq 001 - CS202002013_1 Lamp5_4 In Mouse primary motor cortex (CCN202002013), Lamp5 Pax6 is a member of the Lamp5 subclass. Lamp5 Pax6 includes the Patch-seq and connectivity types Lamp5_4. The minimal set of markers required to distinguish this cell type from other cell types in the primary motor cortex is Pax6 and Pip5k1b (F-beta = 0.674), based on the NS Forest method of marker gene selection. Lamp5 Pax6 cells represent 4.86% of all Lamp5 cells collected in the snRNA-seq 10X v3 B dataset. Lamp5 Pax6 cells have an average of 4643 genes detected, which is 15 more than the average for all Lamp5 cells (4628). Lamp5 Pax6 cells have an average firing rate of 40 Hz, compared to 40.62 Hz for all Lamp5 cells recorded. Other distinguishing features include an input resistance of 275.53 MOhms (240.82 MOhms in all Lamp5 cells), and upstroke:downstroke ratio of 2.42 (3.13 for all Lamp5 cells). The most distinguishing morpholgical features of Lamp5 Pax6, as determined by reconstructions from Patch-seq data, are normalized cortical depth (0.07 vs. 0.2 average for all Lamp5 cells), axon total length (8027.25 vs. 10733.35 microns for all Lamp5 cells), dendrite total length (3467.49 vs. 2247.19 microns for all Lamp5 cells), and stems (5 vs. 7.47 for all Lamp5 cells). PMID:34616066 PMID:34616062 Zizhen Yao {"cell_set_preferred_alias": "Lamp5-like Pax6", "original_label": "Lamp5 Pax6", "cell_set_label": "RNAseq 001", "cell_set_accession": "CS202002013_1", "cell_set_aligned_alias": "Lamp5_4", "cell_set_additional_aliases": "Lamp5 Pax6", "cell_set_alias_assignee": "Zizhen Yao|Nikolas Jorstad|Zizhen Yao", "cell_set_alias_citation": "PMID:34616066|PMID:34616062|PMID:34616066", "cell_set_structure": "primary motor cortex", "cell_set_ontology_tag": "UBERON:0001384", "species": "Mouse", "modality": "RNAseq", "taxonomy_id": "CCN202002013", "taxonomy_description": "Mouse MOp BICCN taxonomy using multiple RNA-Seq datasets ", "child_cell_set_accessions": "", "cell_type_card": "Cell Type", "cell_set_color": "#DDACC9"} CS202002013_1 Lamp5 Pax6 Cell Type Lamp5-like Pax6 Lamp5_4 Lamp5-like Pax6 Lamp5_4 Nikolas Jorstad Lamp5 Pax6 RNAseq 001 Lamp5 Pax6 RNAseq 001-004 - CS202002013_126