Cluster RNAseq 001-090 - CS202002013_121 RNAseq 001-057, 089-090 - CS202002013_123 RNAseq 001-057, 089-090 {"cell_set_preferred_alias": "GABAergic", "original_label": "n7", "cell_set_label": "RNAseq 001-057, 089-090", "cell_set_accession": "CS202002013_123", "cell_set_aligned_alias": "Neuronal: GABAergic", "cell_set_additional_aliases": "", "cell_set_alias_assignee": "Zizhen Yao", "cell_set_alias_citation": "PMID:34616066", "cell_set_structure": "primary motor cortex", "cell_set_ontology_tag": "UBERON:0001384", "species": "Mouse", "modality": "RNAseq", "taxonomy_id": "CCN202002013", "taxonomy_description": "Mouse MOp BICCN taxonomy using multiple RNA-Seq datasets ", "child_cell_set_accessions": "CS202002013_1|CS202002013_2|CS202002013_3|CS202002013_4|CS202002013_5|CS202002013_6|CS202002013_7|CS202002013_8|CS202002013_9|CS202002013_10|CS202002013_11|CS202002013_12|CS202002013_13|CS202002013_14|CS202002013_15|CS202002013_16|CS202002013_17|CS202002013_18|CS202002013_19|CS202002013_20|CS202002013_21|CS202002013_22|CS202002013_23|CS202002013_24|CS202002013_25|CS202002013_26|CS202002013_27|CS202002013_28|CS202002013_29|CS202002013_30|CS202002013_31|CS202002013_32|CS202002013_33|CS202002013_34|CS202002013_35|CS202002013_36|CS202002013_37|CS202002013_38|CS202002013_39|CS202002013_40|CS202002013_41|CS202002013_42|CS202002013_43|CS202002013_44|CS202002013_45|CS202002013_46|CS202002013_47|CS202002013_48|CS202002013_49|CS202002013_50|CS202002013_51|CS202002013_52|CS202002013_53|CS202002013_54|CS202002013_55|CS202002013_56|CS202002013_57|CS202002013_89|CS202002013_90", "cell_type_card": "Class", "cell_set_color": "#F05A28"} Neuronal: GABAergic GABAergic CS202002013_123 GABAergic PMID:34616066 Zizhen Yao GABAergic is: Neurons that use GABA as a neurotransmitter and which exert an inhibitory post-synaptic effect. The minimal set of markers required to distinguish this cell class from other cell classes in the primary motor cortex is Gad1 and Dlx6os1 (F-beta = 0.94), based on the NS Forest method of marker gene selection. GABAergic cells represent 14.99% of all cells collected in the snRNA-seq 10X v3 B dataset. GABAergic cells have an average of 4695 genes detected, which is 414 more than the average for allcells (4281). The average normalized cortical depth of GABAergic cells is 0.478, compared to an average of 0.539 for all cells. GABAergic cells have an average firing rate of 71.48 Hz, compared to 56.42 Hz for all neurons recorded. Other distinguishing features include an input resistance of 262.76 MOhms (227.12 MOhms in all neurons), and upstroke:downstroke ratio of 1.91 (2.62 for all neurons). The most distinguishing morpholgical features of GABAergic, as determined by reconstructions from Patch-seq data, are normalized cortical depth (0.4 vs. 0.46 average for all neurons), axon total length (13796.3 vs. 13796.3 microns for all neurons), dendrite total length (2227.63 vs. 3182.34 microns for all neurons), and stems (5.77 vs. 6.4 for all neurons). n7 Neuronal: GABAergic Inhibitory neurons Class Neuronal: GABAergic