exemplar data of Cluster Vip Htr1f primary motor cortex GABAergic interneuron (Mmus) RNAseq 018-020 - CS202002013_143 RNAseq 018 - CS202002013_18 RNAseq 018 Vip Htr1f CS202002013_18 PMID:34616066 {"cell_set_preferred_alias": "Vip Htr1f", "original_label": "Vip Htr1f", "cell_set_label": "RNAseq 018", "cell_set_accession": "CS202002013_18", "cell_set_aligned_alias": "", "cell_set_additional_aliases": "", "cell_set_alias_assignee": "Zizhen Yao", "cell_set_alias_citation": "PMID:34616066", "cell_set_structure": "primary motor cortex", "cell_set_ontology_tag": "UBERON:0001384", "species": "Mouse", "modality": "RNAseq", "taxonomy_id": "CCN202002013", "taxonomy_description": "Mouse MOp BICCN taxonomy using multiple RNA-Seq datasets ", "child_cell_set_accessions": "", "cell_type_card": "Cell Type", "cell_set_color": "#FF4DC1"} Vip Htr1f Cell Type Zizhen Yao L5 VIP cell In Mouse primary motor cortex (CCN202002013), Vip Htr1f is a member of the Vip subclass. The minimal set of markers required to distinguish this cell type from other cell types in the primary motor cortex is Nov and Vip and Vwc2l (F-beta = 0.675), based on the NS Forest method of marker gene selection. Vip Htr1f cells represent 11.32% of all Vip cells collected in the snRNA-seq 10X v3 B dataset. Vip Htr1f cells have an average of 3729 genes detected, which is 125 less than the average for all Vip cells (3854). Vip Htr1f cells have an average firing rate of 37.67 Hz, compared to 41.07 Hz for all Vip cells recorded. Other distinguishing features include an input resistance of 481.48 MOhms (409.69 MOhms in all Vip cells), and upstroke:downstroke ratio of 2.53 (2.32 for all Vip cells). The most distinguishing morpholgical features of Vip Htr1f, as determined by reconstructions from Patch-seq data, are normalized cortical depth (0.23 vs. 0.36 average for all Vip cells), axon total length (3765.89 vs. 5125.69 microns for all Vip cells), dendrite total length (1839.11 vs. 2222.79 microns for all Vip cells), and stems (3.75 vs. 3.73 for all Vip cells). Vip Htr1f Vip-like_C2 RNAseq 017-018, 020-021 - CS202002013_242