exemplar data of Cluster Vip Gpc3 primary motor cortex GABAergic interneuron (Mmus) RNAseq 019-020 - CS202002013_144 RNAseq 019 - CS202002013_19 Vip-like_C3 Cell Type Vip Gpc3 Vip Gpc3 CS202002013_19 PMID:34616066 In Mouse primary motor cortex (CCN202002013), Vip Gpc3 is a member of the Vip subclass. The minimal set of markers required to distinguish this cell type from other cell types in the primary motor cortex is Pbx3 and Pde3a and Vip (F-beta = 0.75), based on the NS Forest method of marker gene selection. Vip Gpc3 cells represent 8.86% of all Vip cells collected in the snRNA-seq 10X v3 B dataset. Vip Gpc3 cells have an average of 4005 genes detected, which is 151 more than the average for all Vip cells (3854). Vip Gpc3 cells have an average firing rate of 34.65 Hz, compared to 41.07 Hz for all Vip cells recorded. Other distinguishing features include an input resistance of 299.64 MOhms (409.69 MOhms in all Vip cells), and upstroke:downstroke ratio of 2.48 (2.32 for all Vip cells). The most distinguishing morpholgical features of Vip Gpc3, as determined by reconstructions from Patch-seq data, are normalized cortical depth (0.62 vs. 0.36 average for all Vip cells), axon total length (5081.95 vs. 5125.69 microns for all Vip cells), dendrite total length (2273.99 vs. 2222.79 microns for all Vip cells), and stems (4 vs. 3.73 for all Vip cells). Zizhen Yao RNAseq 019 {"cell_set_preferred_alias": "Vip Gpc3", "original_label": "Vip Gpc3", "cell_set_label": "RNAseq 019", "cell_set_accession": "CS202002013_19", "cell_set_aligned_alias": "", "cell_set_additional_aliases": "", "cell_set_alias_assignee": "Zizhen Yao", "cell_set_alias_citation": "PMID:34616066", "cell_set_structure": "primary motor cortex", "cell_set_ontology_tag": "UBERON:0001384", "species": "Mouse", "modality": "RNAseq", "taxonomy_id": "CCN202002013", "taxonomy_description": "Mouse MOp BICCN taxonomy using multiple RNA-Seq datasets ", "child_cell_set_accessions": "", "cell_type_card": "Cell Type", "cell_set_color": "#B09FFF"} Vip Gpc3 L5 VIP cell RNAseq 015, 019, 022 - CS202002013_241