exemplar data of Cluster Sst Chodl primary motor cortex GABAergic interneuron (Mmus) RNAseq 028-057 - CS202002013_150 RNAseq 028 - CS202002013_28 PMID:34616062 PMID:34616066 Cell Type CS202002013_28 Sst Chodl Sst Chodl is: Distinct Sst type expressing Chodl in mouse; the only reported long-range projecting GABAergic type. In Mouse primary motor cortex (CCN202002013), Sst Chodl has 1 child types: and Sst Chodl. Sst Chodl includes the Patch-seq and connectivity types Sst Chodl|Long-projecting SST cell. The minimal set of markers required to distinguish this cell type from other cell types in the primary motor cortex is Nos1 and Chodl (F-beta = 0.967), based on the NS Forest method of marker gene selection. Sst Chodl cells represent 1.23% of all GABAergic cells collected in the snRNA-seq 10X v3 B dataset. Sst Chodl cells have an average of 4904 genes detected, which is 209 more than the average for all GABAergic cells (4695). The average normalized cortical depth of Sst Chodl cells is 0.745, compared to an average of 0.478 for all GABAergic cells. Sst Chodl cells have an average firing rate of 28.21 Hz, compared to 71.48 Hz for all GABAergic cells recorded. Other distinguishing features include an input resistance of 361.55 MOhms (262.76 MOhms in all GABAergic cells), and upstroke:downstroke ratio of 2.52 (1.91 for all GABAergic cells). {"cell_set_preferred_alias": "Sst Chodl", "original_label": "Sst Chodl", "cell_set_label": "RNAseq 028", "cell_set_accession": "CS202002013_28", "cell_set_aligned_alias": "Sst Chodl", "cell_set_additional_aliases": "Sst Chodl|Long-projecting SST cell", "cell_set_alias_assignee": "Zizhen Yao||Nikolas Jorstad|Federico Scala", "cell_set_alias_citation": "PMID:34616066||PMID:34616062|PMID:33184512", "cell_set_structure": "primary motor cortex", "cell_set_ontology_tag": "UBERON:0001384", "species": "Mouse", "modality": "RNAseq", "taxonomy_id": "CCN202002013", "taxonomy_description": "Mouse MOp BICCN taxonomy using multiple RNA-Seq datasets ", "child_cell_set_accessions": "", "cell_type_card": "Cell Type,Subclass", "cell_set_color": "#FFFF00"} Sst Chodl Nikolas Jorstad Federico Scala Long-projecting SST cell Sst Chodl Zizhen Yao RNAseq 028 Long-projecting SST cell Sst Chodl Subclass Long-projecting SST cell Sst Chodl PMID:33184512 Sst Chodl Sst Chodl