exemplar data of Cluster Sst Htr1a primary motor cortex GABAergic interneuron (Mmus) RNAseq 031-033 - CS202002013_156 RNAseq 033 - CS202002013_33 CS202002013_33 {"cell_set_preferred_alias": "Sst Htr1a", "original_label": "Sst Htr1a", "cell_set_label": "RNAseq 033", "cell_set_accession": "CS202002013_33", "cell_set_aligned_alias": "", "cell_set_additional_aliases": "", "cell_set_alias_assignee": "Zizhen Yao", "cell_set_alias_citation": "PMID:34616066", "cell_set_structure": "primary motor cortex", "cell_set_ontology_tag": "UBERON:0001384", "species": "Mouse", "modality": "RNAseq", "taxonomy_id": "CCN202002013", "taxonomy_description": "Mouse MOp BICCN taxonomy using multiple RNA-Seq datasets ", "child_cell_set_accessions": "", "cell_type_card": "Cell Type", "cell_set_color": "#BFAF00"} RNAseq 033 Sst Htr1a Sst Htr1a Sst-like_C1 In Mouse primary motor cortex (CCN202002013), Sst Htr1a is a member of the Sst subclass. The minimal set of markers required to distinguish this cell type from other cell types in the primary motor cortex is Gm30835 and Pdyn (F-beta = 0.64), based on the NS Forest method of marker gene selection. Sst Htr1a cells represent 3.89% of all Sst cells collected in the snRNA-seq 10X v3 B dataset. Sst Htr1a cells have an average of 4720 genes detected, which is 101 less than the average for all Sst cells (4821). Sst Htr1a cells have an average firing rate of 37.78 Hz, compared to 48.24 Hz for all Sst cells recorded. Other distinguishing features include an input resistance of 287.49 MOhms (270.6 MOhms in all Sst cells), and upstroke:downstroke ratio of 2.16 (1.91 for all Sst cells). The most distinguishing morpholgical features of Sst Htr1a, as determined by reconstructions from Patch-seq data, are normalized cortical depth (0.4 vs. 0.41 average for all Sst cells), axon total length (16579.17 vs. 16640.19 microns for all Sst cells), dendrite total length (2143.25 vs. 2670.25 microns for all Sst cells), and stems (4.25 vs. 6.19 for all Sst cells). Sst Htr1a PMID:34616066 Cell Type Zizhen Yao