exemplar data of Cluster Sst Calb2 primary motor cortex GABAergic interneuron (Mmus) RNAseq 039-040 - CS202002013_164 RNAseq 039 - CS202002013_39 {"cell_set_preferred_alias": "Sst Calb2", "original_label": "Sst Calb2", "cell_set_label": "RNAseq 039", "cell_set_accession": "CS202002013_39", "cell_set_aligned_alias": "", "cell_set_additional_aliases": "", "cell_set_alias_assignee": "Zizhen Yao", "cell_set_alias_citation": "PMID:34616066", "cell_set_structure": "primary motor cortex", "cell_set_ontology_tag": "UBERON:0001384", "species": "Mouse", "modality": "RNAseq", "taxonomy_id": "CCN202002013", "taxonomy_description": "Mouse MOp BICCN taxonomy using multiple RNA-Seq datasets ", "child_cell_set_accessions": "", "cell_type_card": "Cell Type", "cell_set_color": "#D2A328"} Zizhen Yao Sst Calb2 PMID:34616066 RNAseq 039 Cell Type CS202002013_39 L2/3/5 fan Martinotti cell In Mouse primary motor cortex (CCN202002013), Sst Calb2 is a member of the Sst subclass. The minimal set of markers required to distinguish this cell type from other cell types in the primary motor cortex is Olfm3 and Sst (F-beta = 0.782), based on the NS Forest method of marker gene selection. Sst Calb2 cells represent 13.2% of all Sst cells collected in the snRNA-seq 10X v3 B dataset. Sst Calb2 cells have an average of 4810 genes detected, which is 11 less than the average for all Sst cells (4821). Sst Calb2 cells have an average firing rate of 39.64 Hz, compared to 48.24 Hz for all Sst cells recorded. Other distinguishing features include an input resistance of 277.8 MOhms (270.6 MOhms in all Sst cells), and upstroke:downstroke ratio of 1.97 (1.91 for all Sst cells). The most distinguishing morpholgical features of Sst Calb2, as determined by reconstructions from Patch-seq data, are normalized cortical depth (0.22 vs. 0.41 average for all Sst cells), axon total length (17239.42 vs. 16640.19 microns for all Sst cells), dendrite total length (2296.36 vs. 2670.25 microns for all Sst cells), and stems (6.1 vs. 6.19 for all Sst cells). Sst Calb2 Sst Calb2 Sst-like_C3