exemplar data of Cluster Sst C1ql3_1 primary motor cortex GABAergic interneuron (Mmus) RNAseq 042-043 - CS202002013_166 RNAseq 042 - CS202002013_42 In Mouse primary motor cortex (CCN202002013), Sst C1ql3_1 is a member of the Sst subclass. Sst C1ql3_1 includes the Patch-seq and connectivity types Sst_5. The minimal set of markers required to distinguish this cell type from other cell types in the primary motor cortex is Gm48893 and Pard3b (F-beta = 0.501), based on the NS Forest method of marker gene selection. Sst C1ql3_1 cells represent 4% of all Sst cells collected in the snRNA-seq 10X v3 B dataset. Sst C1ql3_1 cells have an average of 4832 genes detected, which is 11 more than the average for all Sst cells (4821). Sst C1ql3_1 cells have an average firing rate of 64.17 Hz, compared to 48.24 Hz for all Sst cells recorded. Other distinguishing features include an input resistance of 298.32 MOhms (270.6 MOhms in all Sst cells), and upstroke:downstroke ratio of 1.66 (1.91 for all Sst cells). The most distinguishing morpholgical features of Sst C1ql3_1, as determined by reconstructions from Patch-seq data, are normalized cortical depth (0.54 vs. 0.41 average for all Sst cells), axon total length (15108.86 vs. 16640.19 microns for all Sst cells), dendrite total length (3976.56 vs. 2670.25 microns for all Sst cells), and stems (9 vs. 6.19 for all Sst cells). Sst C1ql3_1 L5/6 non-Martinotti cell Zizhen Yao Sst_5 PMID:34616062 PMID:34616066 Cell Type Sst C1ql3_1 Sst_5 RNAseq 042 Sst_5 Sst C1ql3_1 Nikolas Jorstad {"cell_set_preferred_alias": "Sst C1ql3_1", "original_label": "Sst C1ql3_1", "cell_set_label": "RNAseq 042", "cell_set_accession": "CS202002013_42", "cell_set_aligned_alias": "Sst_5", "cell_set_additional_aliases": "", "cell_set_alias_assignee": "Zizhen Yao|Nikolas Jorstad", "cell_set_alias_citation": "PMID:34616066|PMID:34616062", "cell_set_structure": "primary motor cortex", "cell_set_ontology_tag": "UBERON:0001384", "species": "Mouse", "modality": "RNAseq", "taxonomy_id": "CCN202002013", "taxonomy_description": "Mouse MOp BICCN taxonomy using multiple RNA-Seq datasets ", "child_cell_set_accessions": "", "cell_type_card": "Cell Type", "cell_set_color": "#802600"} CS202002013_42