exemplar data of Cluster Pvalb Gabrg1 primary motor cortex GABAergic interneuron (Mmus) RNAseq 046-048 - CS202002013_169 RNAseq 048-049 - CS202002013_248 RNAseq 048 - CS202002013_48 L6 FS cell w/ large sag L6 FS cell w/ large sag Federico Scala Pvalb Gabrg1 Pvalb Gabrg1 PMID:34616066 Zizhen Yao {"cell_set_preferred_alias": "Pvalb Gabrg1", "original_label": "Pvalb Gabrg1", "cell_set_label": "RNAseq 048", "cell_set_accession": "CS202002013_48", "cell_set_aligned_alias": "", "cell_set_additional_aliases": "L6 FS cell w/ large sag", "cell_set_alias_assignee": "Zizhen Yao|Federico Scala", "cell_set_alias_citation": "PMID:34616066|PMID:33184512", "cell_set_structure": "primary motor cortex", "cell_set_ontology_tag": "UBERON:0001384", "species": "Mouse", "modality": "RNAseq", "taxonomy_id": "CCN202002013", "taxonomy_description": "Mouse MOp BICCN taxonomy using multiple RNA-Seq datasets ", "child_cell_set_accessions": "", "cell_type_card": "Cell Type", "cell_set_color": "#ED4C50"} RNAseq 048 PMID:33184512 L6 FS cell w/ large sag Cell Type CS202002013_48 In Mouse primary motor cortex (CCN202002013), Pvalb Gabrg1 is a member of the Pvalb subclass. Pvalb Gabrg1 includes the Patch-seq and connectivity types L6 FS cell w/ large sag. The minimal set of markers required to distinguish this cell type from other cell types in the primary motor cortex is Gabrg1 and Th (F-beta = 0.688), based on the NS Forest method of marker gene selection. Pvalb Gabrg1 cells represent 4.53% of all Pvalb cells collected in the snRNA-seq 10X v3 B dataset. Pvalb Gabrg1 cells have an average of 4590 genes detected, which is 457 less than the average for all Pvalb cells (5047). Pvalb Gabrg1 cells have an average firing rate of 101.94 Hz, compared to 121.98 Hz for all Pvalb cells recorded. Other distinguishing features include an input resistance of 293.37 MOhms (175.36 MOhms in all Pvalb cells), and upstroke:downstroke ratio of 1.43 (1.24 for all Pvalb cells). The most distinguishing morpholgical features of Pvalb Gabrg1, as determined by reconstructions from Patch-seq data, are normalized cortical depth (0.86 vs. 0.48 average for all Pvalb cells), axon total length (12120.34 vs. 16688.56 microns for all Pvalb cells), dendrite total length (2078.6 vs. 1892.01 microns for all Pvalb cells), and stems (5 vs. 5.8 for all Pvalb cells). Pvalb Gabrg1 Pvalb-like_C2