exemplar data of Cluster Pvalb Egfem1 primary motor cortex GABAergic interneuron (Mmus) RNAseq 049-055 - CS202002013_172 RNAseq 048-049 - CS202002013_248 RNAseq 049-053 - CS202002013_257 RNAseq 049 - CS202002013_49 Cell Type CS202002013_49 Pvalb Egfem1 Pvalb Egfem1 Lower FS Basket cell Pvalb-like_C2 RNAseq 049 Zizhen Yao Pvalb Egfem1 {"cell_set_preferred_alias": "Pvalb Egfem1", "original_label": "Pvalb Egfem1", "cell_set_label": "RNAseq 049", "cell_set_accession": "CS202002013_49", "cell_set_aligned_alias": "", "cell_set_additional_aliases": "", "cell_set_alias_assignee": "Zizhen Yao", "cell_set_alias_citation": "PMID:34616066", "cell_set_structure": "primary motor cortex", "cell_set_ontology_tag": "UBERON:0001384", "species": "Mouse", "modality": "RNAseq", "taxonomy_id": "CCN202002013", "taxonomy_description": "Mouse MOp BICCN taxonomy using multiple RNA-Seq datasets ", "child_cell_set_accessions": "", "cell_type_card": "Cell Type", "cell_set_color": "#C05661"} PMID:34616066 In Mouse primary motor cortex (CCN202002013), Pvalb Egfem1 is a member of the Pvalb subclass. The minimal set of markers required to distinguish this cell type from other cell types in the primary motor cortex is 9330158H04Rik and Plch1 and Tac1 (F-beta = 0.45), based on the NS Forest method of marker gene selection. Pvalb Egfem1 cells represent 3.03% of all Pvalb cells collected in the snRNA-seq 10X v3 B dataset. Pvalb Egfem1 cells have an average of 5303 genes detected, which is 256 more than the average for all Pvalb cells (5047). Pvalb Egfem1 cells have an average firing rate of 108.03 Hz, compared to 121.98 Hz for all Pvalb cells recorded. Other distinguishing features include an input resistance of 247.31 MOhms (175.36 MOhms in all Pvalb cells), and upstroke:downstroke ratio of 1.34 (1.24 for all Pvalb cells). The most distinguishing morpholgical features of Pvalb Egfem1, as determined by reconstructions from Patch-seq data, are normalized cortical depth (0.84 vs. 0.48 average for all Pvalb cells), axon total length (11564.71 vs. 16688.56 microns for all Pvalb cells), dendrite total length (1985.21 vs. 1892.01 microns for all Pvalb cells), and stems (6 vs. 5.8 for all Pvalb cells).