exemplar data of Cluster Lamp5 Pdlim5_1 primary motor cortex GABAergic interneuron (Mmus) RNAseq 005-006 - CS202002013_131 RNAseq 005 - CS202002013_5 PMID:34616066 Lamp5_1 RNAseq 005 PMID:34616062 Zizhen Yao Lamp5 Pdlim5_1 Neurogliaform cell {"cell_set_preferred_alias": "Lamp5 Pdlim5_1", "original_label": "Lamp5 Pdlim5_1", "cell_set_label": "RNAseq 005", "cell_set_accession": "CS202002013_5", "cell_set_aligned_alias": "Lamp5_1", "cell_set_additional_aliases": "", "cell_set_alias_assignee": "Zizhen Yao|Nikolas Jorstad", "cell_set_alias_citation": "PMID:34616066|PMID:34616062", "cell_set_structure": "primary motor cortex", "cell_set_ontology_tag": "UBERON:0001384", "species": "Mouse", "modality": "RNAseq", "taxonomy_id": "CCN202002013", "taxonomy_description": "Mouse MOp BICCN taxonomy using multiple RNA-Seq datasets ", "child_cell_set_accessions": "", "cell_type_card": "Cell Type", "cell_set_color": "#FF7290"} Lamp5_1 Nikolas Jorstad Lamp5_1 Lamp5 Pdlim5_1 Cell Type CS202002013_5 In Mouse primary motor cortex (CCN202002013), Lamp5 Pdlim5_1 is a member of the Lamp5 subclass. Lamp5 Pdlim5_1 includes the Patch-seq and connectivity types Lamp5_1. The minimal set of markers required to distinguish this cell type from other cell types in the primary motor cortex is Dock5 and Ndnf and Ndst4 (F-beta = 0.515), based on the NS Forest method of marker gene selection. Lamp5 Pdlim5_1 cells represent 8.94% of all Lamp5 cells collected in the snRNA-seq 10X v3 B dataset. Lamp5 Pdlim5_1 cells have an average of 4354 genes detected, which is 274 less than the average for all Lamp5 cells (4628). Lamp5 Pdlim5_1 cells have an average firing rate of 35.83 Hz, compared to 40.62 Hz for all Lamp5 cells recorded. Other distinguishing features include an input resistance of 221 MOhms (240.82 MOhms in all Lamp5 cells), and upstroke:downstroke ratio of 2.45 (3.13 for all Lamp5 cells). The most distinguishing morpholgical features of Lamp5 Pdlim5_1, as determined by reconstructions from Patch-seq data, are normalized cortical depth (0.08 vs. 0.2 average for all Lamp5 cells), axon total length (7758.72 vs. 10733.35 microns for all Lamp5 cells), dendrite total length (2749.69 vs. 2247.19 microns for all Lamp5 cells), and stems (6.33 vs. 7.47 for all Lamp5 cells). Lamp5 Pdlim5_1