exemplar data of Cluster L6 IT_1 primary motor cortex glutamatergic neuron (Mmus) RNAseq 067-068 - CS202002013_192 RNAseq 067 - CS202002013_67 L6 IT_1 L6 IT_1 Zizhen Yao Cell Type PMID:34616062 L6 IT_1 Nikolas Jorstad CS202002013_67 L6 IT_1 In Mouse primary motor cortex (CCN202002013), L6 IT_1 is a member of the L6 IT subclass. The minimal set of markers required to distinguish this cell type from other cell types in the primary motor cortex is Bmpr1b and Fst and Ntng1 (F-beta = 0.614), based on the NS Forest method of marker gene selection. L6 IT_1 cells represent 30.83% of all L6 IT cells collected in the snRNA-seq 10X v3 B dataset. L6 IT_1 cells have an average of 5295 genes detected, which is 90 less than the average for all L6 IT cells (5205). L6 IT_1 cells have an average firing rate of 38.33 Hz, compared to 35.14 Hz for all L6 IT cells recorded. Other distinguishing features include an input resistance of 170.21 MOhms (185.91 MOhms in all L6 IT cells), and upstroke:downstroke ratio of 4.86 (4.38 for all L6 IT cells). The most distinguishing morpholgical features of L6 IT_1, as determined by reconstructions from Patch-seq data, are normalized cortical depth (0.78 vs. 0.81 average for all L6 IT cells), dendrite total length (3406.62 vs. 3273.05 microns for all L6 IT cells), and stems (5.62 vs. 6.11 for all L6 IT cells). PMID:34616066 {"cell_set_preferred_alias": "L6 IT_1", "original_label": "L6 IT_1", "cell_set_label": "RNAseq 067", "cell_set_accession": "CS202002013_67", "cell_set_aligned_alias": "L6 IT_1", "cell_set_additional_aliases": "", "cell_set_alias_assignee": "Zizhen Yao|Nikolas Jorstad", "cell_set_alias_citation": "PMID:34616066|PMID:34616062", "cell_set_structure": "primary motor cortex", "cell_set_ontology_tag": "UBERON:0001384", "species": "Mouse", "modality": "RNAseq", "taxonomy_id": "CCN202002013", "taxonomy_description": "Mouse MOp BICCN taxonomy using multiple RNA-Seq datasets ", "child_cell_set_accessions": "", "cell_type_card": "Cell Type", "cell_set_color": "#B2AD23"} L6 IT_1 RNAseq 067