<?xml version="1.0"?>
<?xml-stylesheet type="text/xsl" href="https://ontobee.org/ontology/view/PSDO?iri=http://purl.obolibrary.org/obo/OBI_0500003"?>
<rdf:RDF xmlns="http://www.w3.org/2002/07/owl#"
     xml:base="http://www.w3.org/2002/07/owl"
     xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#"
     xmlns:owl="http://www.w3.org/2002/07/owl#"
     xmlns:oboInOwl="http://www.geneontology.org/formats/oboInOwl#"
     xmlns:xsd="http://www.w3.org/2001/XMLSchema#"
     xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#"
     xmlns:foaf="http://xmlns.com/foaf/0.1/"
     xmlns:dc="http://purl.org/dc/elements/1.1/"
     xmlns:ns3="http://purl.obolibrary.org/obo/">
    


    <!-- 
    ///////////////////////////////////////////////////////////////////////////////////////
    //
    // Annotation properties
    //
    ///////////////////////////////////////////////////////////////////////////////////////
     -->

    <AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/IAO_0000117"/>
    <AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/IAO_0000119"/>
    <AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/IAO_0000114"/>
    <AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/IAO_0000412"/>
    <AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/IAO_0000115"/>
    <AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/STATO_0000032"/>
    <AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/IAO_0000112"/>
    <AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/IAO_0000111"/>
    


    <!-- 
    ///////////////////////////////////////////////////////////////////////////////////////
    //
    // Datatypes
    //
    ///////////////////////////////////////////////////////////////////////////////////////
     -->

    


    <!-- 
    ///////////////////////////////////////////////////////////////////////////////////////
    //
    // Object Properties
    //
    ///////////////////////////////////////////////////////////////////////////////////////
     -->

    


    <!-- http://purl.obolibrary.org/obo/BFO_0000051 -->

    <ObjectProperty rdf:about="http://purl.obolibrary.org/obo/BFO_0000051">
        <rdf:type rdf:resource="http://www.w3.org/2002/07/owl#TransitiveProperty"/>
        <rdfs:label xml:lang="en">has part</rdfs:label>
    </ObjectProperty>
    


    <!-- http://purl.obolibrary.org/obo/IAO_0000136 -->

    <ObjectProperty rdf:about="http://purl.obolibrary.org/obo/IAO_0000136">
        <rdfs:label xml:lang="en">is about</rdfs:label>
    </ObjectProperty>
    


    <!-- http://purl.obolibrary.org/obo/STATO_0000001 -->

    <ObjectProperty rdf:about="http://purl.obolibrary.org/obo/STATO_0000001">
        <rdfs:label xml:lang="en">declares</rdfs:label>
    </ObjectProperty>
    


    <!-- 
    ///////////////////////////////////////////////////////////////////////////////////////
    //
    // Classes
    //
    ///////////////////////////////////////////////////////////////////////////////////////
     -->

    


    <!-- http://purl.obolibrary.org/obo/IAO_0000078 -->

    <Class rdf:about="http://purl.obolibrary.org/obo/IAO_0000078"/>
    


    <!-- http://purl.obolibrary.org/obo/IAO_0000584 -->

    <Class rdf:about="http://purl.obolibrary.org/obo/IAO_0000584">
        <rdfs:label xml:lang="en">time sampled measurement data set</rdfs:label>
    </Class>
    


    <!-- http://purl.obolibrary.org/obo/OBI_0000115 -->

    <Class rdf:about="http://purl.obolibrary.org/obo/OBI_0000115">
        <rdfs:label xml:lang="en">intervention design</rdfs:label>
    </Class>
    


    <!-- http://purl.obolibrary.org/obo/OBI_0000750 -->

    <Class rdf:about="http://purl.obolibrary.org/obo/OBI_0000750">
        <rdfs:label xml:lang="en">study design independent variable</rdfs:label>
    </Class>
    


    <!-- http://purl.obolibrary.org/obo/OBI_0500002 -->

    <Class rdf:about="http://purl.obolibrary.org/obo/OBI_0500002">
        <rdfs:label xml:lang="en">repeated measure design</rdfs:label>
    </Class>
    


    <!-- http://purl.obolibrary.org/obo/OBI_0500003 -->

    <Class rdf:about="http://purl.obolibrary.org/obo/OBI_0500003">
        <rdfs:label xml:lang="en">cross over design</rdfs:label>
        <rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/OBI_0000115"/>
        <rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/OBI_0500002"/>
        <rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/OBI_0500020"/>
        <rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/STATO_0000046"/>
        <rdfs:subClassOf>
            <Restriction>
                <onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000051"/>
                <someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/STATO_0000253"/>
            </Restriction>
        </rdfs:subClassOf>
        <rdfs:subClassOf>
            <Restriction>
                <onProperty rdf:resource="http://purl.obolibrary.org/obo/STATO_0000001"/>
                <someValuesFrom>
                    <Class>
                        <intersectionOf rdf:parseType="Collection">
                            <Class>
                                <intersectionOf rdf:parseType="Collection">
                                    <rdf:Description rdf:about="http://purl.obolibrary.org/obo/OBI_0000750"/>
                                    <rdf:Description rdf:about="http://purl.obolibrary.org/obo/STATO_0000248"/>
                                </intersectionOf>
                            </Class>
                            <Restriction>
                                <onProperty rdf:resource="http://purl.obolibrary.org/obo/IAO_0000136"/>
                                <someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/IAO_0000584"/>
                            </Restriction>
                        </intersectionOf>
                    </Class>
                </someValuesFrom>
            </Restriction>
        </rdfs:subClassOf>
        <ns3:STATO_0000032 xml:lang="en"></ns3:STATO_0000032>
        <ns3:IAO_0000119 xml:lang="en">(source: http://www.sbu.se/Filer/Content0/publikationer/1/literaturesearching_1993/glossary.html)</ns3:IAO_0000119>
        <ns3:IAO_0000112 xml:lang="en">PMID: 17601993-Objective: HIV-infected patients with lipodystrophy (HIV-lipodystrophy) are insulin resistant and have elevated plasma free fatty acid (FFA) concentrations. We aimed to explore the mechanisms underlying FFA-induced insulin resistance in patients with HIV-lipodystrophy. Research Design and Methods: Using a randomized placebo-controlled cross-over design, we studied the effects of an overnight acipimox-induced suppression of FFA on glucose and FFA metabolism by using stable isotope labelled tracer techniques during basal conditions and a two-stage euglycemic, hyperinsulinemic clamp (20 mU insulin/m(2)/min; 50 mU insulin/m(2)/min) in nine patients with nondiabetic HIV-lipodystrophy. All patients received antiretroviral therapy. Biopsies from the vastus lateralis muscle were obtained during each stage of the clamp. Results: Acipimox treatment reduced basal FFA rate of appearance by 68.9% (52.6%-79.5%) and decreased plasma FFA concentration by 51.6 % (42.0%-58.9%), (both, P &lt; 0.0001). Endogenous glucose production was not influenced by acipimox. During the clamp the increase in glucose-uptake was significantly greater after acipimox treatment compared to placebo (acipimox: 26.85 (18.09-39.86) vs placebo: 20.30 (13.67-30.13) mumol/kg/min; P &lt; 0.01). Insulin increased phosphorylation of Akt (Thr(308)) and GSK-3beta (Ser(9)), decreased phosphorylation of glycogen synthase (GS) site 3a+b and increased GS-activity (I-form) in skeletal muscle (P &lt; 0.01). Acipimox decreased phosphorylation of GS (site 3a+b) (P &lt; 0.02) and increased GS-activity (P &lt; 0.01) in muscle. Conclusion: The present study provides direct evidence that suppression of lipolysis in patients with HIV-lipodystrophy improves insulin-stimulated peripheral glucose-uptake. The increased glucose-uptake may in part be explained by increased dephosphorylation of GS (site 3a+b) resulting in increased GS activity.</ns3:IAO_0000112>
        <ns3:IAO_0000117 xml:lang="en">Philippe Rocca-Serra</ns3:IAO_0000117>
        <ns3:IAO_0000115 xml:lang="en">a repeated measure design which ensures that experimental units receive, in sequence, the treatment (or the control), and then, after a specified time interval (aka *wash-out periods*), switch to the control (or treatment). In this design, subjects (patients in human context) serve as their own controls, and randomization may be used to determine the ordering which a subject receives the treatment and control</ns3:IAO_0000115>
        <ns3:IAO_0000111 xml:lang="en">cross over design</ns3:IAO_0000111>
        <ns3:IAO_0000114 rdf:resource="http://purl.obolibrary.org/obo/IAO_0000120"/>
        <ns3:IAO_0000412 rdf:resource="http://purl.obolibrary.org/obo/obi.owl"/>
    </Class>
    


    <!-- http://purl.obolibrary.org/obo/OBI_0500020 -->

    <Class rdf:about="http://purl.obolibrary.org/obo/OBI_0500020">
        <rdfs:label xml:lang="en">time series design</rdfs:label>
    </Class>
    


    <!-- http://purl.obolibrary.org/obo/STATO_0000046 -->

    <Class rdf:about="http://purl.obolibrary.org/obo/STATO_0000046">
        <rdfs:label xml:lang="en">block design</rdfs:label>
    </Class>
    


    <!-- http://purl.obolibrary.org/obo/STATO_0000248 -->

    <Class rdf:about="http://purl.obolibrary.org/obo/STATO_0000248">
        <rdfs:label xml:lang="en">blocking variable</rdfs:label>
    </Class>
    


    <!-- http://purl.obolibrary.org/obo/STATO_0000253 -->

    <Class rdf:about="http://purl.obolibrary.org/obo/STATO_0000253">
        <rdfs:label xml:lang="en">within subject comparison objective</rdfs:label>
    </Class>
    


    <!-- 
    ///////////////////////////////////////////////////////////////////////////////////////
    //
    // Individuals
    //
    ///////////////////////////////////////////////////////////////////////////////////////
     -->

    


    <!-- http://purl.obolibrary.org/obo/IAO_0000120 -->

    <Thing rdf:about="http://purl.obolibrary.org/obo/IAO_0000120">
        <rdf:type rdf:resource="http://purl.obolibrary.org/obo/IAO_0000078"/>
        <rdf:type rdf:resource="http://www.w3.org/2002/07/owl#NamedIndividual"/>
        <rdfs:label xml:lang="en">metadata complete</rdfs:label>
    </Thing>
    


    <!-- http://purl.obolibrary.org/obo/obi.owl -->

    <NamedIndividual rdf:about="http://purl.obolibrary.org/obo/obi.owl">
        <rdfs:label>obi.owl</rdfs:label>
    </NamedIndividual>
</rdf:RDF>



<!-- Generated by the OWL API (version 3.2.4.1806) http://owlapi.sourceforge.net -->



