<?xml version="1.0"?>
<?xml-stylesheet type="text/xsl" href="https://ontobee.org/ontology/view/PSDO?iri=http://purl.obolibrary.org/obo/STATO_0000303"?>
<rdf:RDF xmlns="http://www.w3.org/2002/07/owl#"
     xml:base="http://www.w3.org/2002/07/owl"
     xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#"
     xmlns:owl="http://www.w3.org/2002/07/owl#"
     xmlns:oboInOwl="http://www.geneontology.org/formats/oboInOwl#"
     xmlns:xsd="http://www.w3.org/2001/XMLSchema#"
     xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#"
     xmlns:foaf="http://xmlns.com/foaf/0.1/"
     xmlns:dc="http://purl.org/dc/elements/1.1/"
     xmlns:ns3="http://purl.obolibrary.org/obo/">
    


    <!-- 
    ///////////////////////////////////////////////////////////////////////////////////////
    //
    // Annotation properties
    //
    ///////////////////////////////////////////////////////////////////////////////////////
     -->

    <AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/IAO_0000118"/>
    <AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/IAO_0000117"/>
    <AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/IAO_0000119"/>
    <AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/IAO_0000114"/>
    <AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/STATO_0000391"/>
    <AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/STATO_0000041"/>
    <AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/IAO_0000115"/>
    <AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/STATO_0000032"/>
    


    <!-- 
    ///////////////////////////////////////////////////////////////////////////////////////
    //
    // Datatypes
    //
    ///////////////////////////////////////////////////////////////////////////////////////
     -->

    


    <!-- 
    ///////////////////////////////////////////////////////////////////////////////////////
    //
    // Object Properties
    //
    ///////////////////////////////////////////////////////////////////////////////////////
     -->

    


    <!-- http://purl.obolibrary.org/obo/IAO_0000136 -->

    <ObjectProperty rdf:about="http://purl.obolibrary.org/obo/IAO_0000136">
        <rdfs:label xml:lang="en">is about</rdfs:label>
    </ObjectProperty>
    


    <!-- http://purl.obolibrary.org/obo/OBI_0000293 -->

    <ObjectProperty rdf:about="http://purl.obolibrary.org/obo/OBI_0000293">
        <rdfs:label xml:lang="en">has_specified_input</rdfs:label>
    </ObjectProperty>
    


    <!-- http://purl.obolibrary.org/obo/OBI_0000299 -->

    <ObjectProperty rdf:about="http://purl.obolibrary.org/obo/OBI_0000299">
        <rdfs:label xml:lang="en">has_specified_output</rdfs:label>
    </ObjectProperty>
    


    <!-- http://purl.obolibrary.org/obo/OBI_0000417 -->

    <ObjectProperty rdf:about="http://purl.obolibrary.org/obo/OBI_0000417">
        <rdfs:label>achieves_planned_objective</rdfs:label>
    </ObjectProperty>
    


    <!-- http://purl.obolibrary.org/obo/STATO_0000205 -->

    <ObjectProperty rdf:about="http://purl.obolibrary.org/obo/STATO_0000205">
        <rdfs:label xml:lang="en">is denoted by</rdfs:label>
    </ObjectProperty>
    


    <!-- 
    ///////////////////////////////////////////////////////////////////////////////////////
    //
    // Data properties
    //
    ///////////////////////////////////////////////////////////////////////////////////////
     -->

    


    <!-- http://purl.obolibrary.org/obo/STATO_0000129 -->

    <DatatypeProperty rdf:about="http://purl.obolibrary.org/obo/STATO_0000129">
        <rdfs:label xml:lang="en">has value</rdfs:label>
    </DatatypeProperty>
    


    <!-- 
    ///////////////////////////////////////////////////////////////////////////////////////
    //
    // Classes
    //
    ///////////////////////////////////////////////////////////////////////////////////////
     -->

    


    <!-- http://purl.obolibrary.org/obo/IAO_0000078 -->

    <Class rdf:about="http://purl.obolibrary.org/obo/IAO_0000078"/>
    


    <!-- http://purl.obolibrary.org/obo/OBI_0000739 -->

    <Class rdf:about="http://purl.obolibrary.org/obo/OBI_0000739">
        <rdfs:label xml:lang="en">Student&#39;s t-test</rdfs:label>
    </Class>
    


    <!-- http://purl.obolibrary.org/obo/OBI_0000751 -->

    <Class rdf:about="http://purl.obolibrary.org/obo/OBI_0000751">
        <rdfs:label xml:lang="en">study design dependent variable</rdfs:label>
    </Class>
    


    <!-- http://purl.obolibrary.org/obo/OBI_0200000 -->

    <Class rdf:about="http://purl.obolibrary.org/obo/OBI_0200000">
        <rdfs:label xml:lang="en">data transformation</rdfs:label>
    </Class>
    


    <!-- http://purl.obolibrary.org/obo/STATO_0000019 -->

    <Class rdf:about="http://purl.obolibrary.org/obo/STATO_0000019">
        <rdfs:label xml:lang="en">normal distribution hypothesis</rdfs:label>
    </Class>
    


    <!-- http://purl.obolibrary.org/obo/STATO_0000053 -->

    <Class rdf:about="http://purl.obolibrary.org/obo/STATO_0000053">
        <rdfs:label xml:lang="en">false positive rate</rdfs:label>
    </Class>
    


    <!-- http://purl.obolibrary.org/obo/STATO_0000059 -->

    <Class rdf:about="http://purl.obolibrary.org/obo/STATO_0000059">
        <rdfs:label xml:lang="en">Student&#39;s t distribution</rdfs:label>
    </Class>
    


    <!-- http://purl.obolibrary.org/obo/STATO_0000176 -->

    <Class rdf:about="http://purl.obolibrary.org/obo/STATO_0000176">
        <rdfs:label xml:lang="en">t-statistic</rdfs:label>
    </Class>
    


    <!-- http://purl.obolibrary.org/obo/STATO_0000193 -->

    <Class rdf:about="http://purl.obolibrary.org/obo/STATO_0000193">
        <rdfs:label>study group population</rdfs:label>
    </Class>
    


    <!-- http://purl.obolibrary.org/obo/STATO_0000251 -->

    <Class rdf:about="http://purl.obolibrary.org/obo/STATO_0000251">
        <rdfs:label xml:lang="en">continuous variable</rdfs:label>
    </Class>
    


    <!-- http://purl.obolibrary.org/obo/STATO_0000255 -->

    <Class rdf:about="http://purl.obolibrary.org/obo/STATO_0000255">
        <rdfs:label xml:lang="en">between group comparison objective</rdfs:label>
    </Class>
    


    <!-- http://purl.obolibrary.org/obo/STATO_0000279 -->

    <Class rdf:about="http://purl.obolibrary.org/obo/STATO_0000279">
        <rdfs:label>between group comparison statistical test</rdfs:label>
    </Class>
    


    <!-- http://purl.obolibrary.org/obo/STATO_0000303 -->

    <Class rdf:about="http://purl.obolibrary.org/obo/STATO_0000303">
        <rdfs:label xml:lang="en">two sample t-test with equal variance</rdfs:label>
        <rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/OBI_0000739"/>
        <rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/OBI_0200000"/>
        <rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/STATO_0000279"/>
        <rdfs:subClassOf>
            <Restriction>
                <onProperty rdf:resource="http://purl.obolibrary.org/obo/OBI_0000293"/>
                <someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/STATO_0000053"/>
            </Restriction>
        </rdfs:subClassOf>
        <rdfs:subClassOf>
            <Restriction>
                <onProperty rdf:resource="http://purl.obolibrary.org/obo/OBI_0000293"/>
                <onClass>
                    <Class>
                        <intersectionOf rdf:parseType="Collection">
                            <rdf:Description rdf:about="http://purl.obolibrary.org/obo/STATO_0000573"/>
                            <Restriction>
                                <onProperty rdf:resource="http://purl.obolibrary.org/obo/IAO_0000136"/>
                                <someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/STATO_0000193"/>
                            </Restriction>
                        </intersectionOf>
                    </Class>
                </onClass>
                <qualifiedCardinality rdf:datatype="http://www.w3.org/2001/XMLSchema#nonNegativeInteger">2</qualifiedCardinality>
            </Restriction>
        </rdfs:subClassOf>
        <rdfs:subClassOf>
            <Restriction>
                <onProperty rdf:resource="http://purl.obolibrary.org/obo/OBI_0000417"/>
                <someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/STATO_0000255"/>
            </Restriction>
        </rdfs:subClassOf>
        <rdfs:subClassOf>
            <Restriction>
                <onProperty rdf:resource="http://purl.obolibrary.org/obo/OBI_0000293"/>
                <someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/STATO_0000059"/>
            </Restriction>
        </rdfs:subClassOf>
        <rdfs:subClassOf>
            <Restriction>
                <onProperty rdf:resource="http://purl.obolibrary.org/obo/OBI_0000293"/>
                <someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/STATO_0000176"/>
            </Restriction>
        </rdfs:subClassOf>
        <rdfs:subClassOf>
            <Restriction>
                <onProperty rdf:resource="http://purl.obolibrary.org/obo/OBI_0000293"/>
                <onClass>
                    <Class>
                        <intersectionOf rdf:parseType="Collection">
                            <rdf:Description rdf:about="http://purl.obolibrary.org/obo/OBI_0000751"/>
                            <rdf:Description rdf:about="http://purl.obolibrary.org/obo/STATO_0000251"/>
                            <Restriction>
                                <onProperty rdf:resource="http://purl.obolibrary.org/obo/STATO_0000205"/>
                                <someValuesFrom>
                                    <Class>
                                        <intersectionOf rdf:parseType="Collection">
                                            <rdf:Description rdf:about="http://purl.obolibrary.org/obo/STATO_0000019"/>
                                            <Restriction>
                                                <onProperty rdf:resource="http://purl.obolibrary.org/obo/STATO_0000129"/>
                                                <hasValue rdf:datatype="http://www.w3.org/2001/XMLSchema#boolean">true</hasValue>
                                            </Restriction>
                                        </intersectionOf>
                                    </Class>
                                </someValuesFrom>
                            </Restriction>
                        </intersectionOf>
                    </Class>
                </onClass>
                <minQualifiedCardinality rdf:datatype="http://www.w3.org/2001/XMLSchema#nonNegativeInteger">1</minQualifiedCardinality>
            </Restriction>
        </rdfs:subClassOf>
        <rdfs:subClassOf>
            <Restriction>
                <onProperty rdf:resource="http://purl.obolibrary.org/obo/OBI_0000299"/>
                <someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/STATO_0000700"/>
            </Restriction>
        </rdfs:subClassOf>
        <ns3:IAO_0000117 xml:lang="en">Alejandra Gonzalez-Beltran</ns3:IAO_0000117>
        <ns3:STATO_0000391>scipy.stats.ttest_ind(a, b, axis=0, equal_var=True)

http://docs.scipy.org/doc/scipy/reference/generated/scipy.stats.ttest_ind.html#scipy.stats.ttest_ind

source:
https://github.com/scipy/scipy/blob/v0.15.1/scipy/stats/stats.py#L3271</ns3:STATO_0000391>
        <ns3:IAO_0000117 xml:lang="en">Orlaith Burke</ns3:IAO_0000117>
        <ns3:IAO_0000117 xml:lang="en">Philippe Rocca-Serra</ns3:IAO_0000117>
        <ns3:IAO_0000119 xml:lang="en">adapted from:
http://en.wikipedia.org/wiki/Student&#39;s_t-test#Independent_.28unpaired.29_samples

and from:
http://www.psychology.emory.edu/clinical/bliwise/Tutorials/TOM/meanstests/tind.htm</ns3:IAO_0000119>
        <ns3:STATO_0000032 xml:lang="en">t-test for independent means assuming equal variance</ns3:STATO_0000032>
        <ns3:STATO_0000041 xml:lang="en">t.test(x, y = NULL,
       alternative = c(&quot;two.sided&quot;, &quot;less&quot;, &quot;greater&quot;),
       mu = 0, paired = FALSE, var.equal = TRUE,
       conf.level = 0.95, ...)

http://stat.ethz.ch/R-manual/R-patched/library/stats/html/t.test.html</ns3:STATO_0000041>
        <ns3:IAO_0000118 xml:lang="en">two sample t-test</ns3:IAO_0000118>
        <ns3:IAO_0000115 xml:lang="en">two sample t-test is a null hypothesis statistical test which is used to reject or accept the hypothesis of absence of difference between the means over 2 randomly sampled populations.
It uses a t-distribution for the test and assumes that the variables in the population are normally distributed and with equal variances.</ns3:IAO_0000115>
        <ns3:IAO_0000114 rdf:resource="http://purl.obolibrary.org/obo/IAO_0000122"/>
    </Class>
    


    <!-- http://purl.obolibrary.org/obo/STATO_0000573 -->

    <Class rdf:about="http://purl.obolibrary.org/obo/STATO_0000573">
        <rdfs:label>average value</rdfs:label>
    </Class>
    


    <!-- http://purl.obolibrary.org/obo/STATO_0000700 -->

    <Class rdf:about="http://purl.obolibrary.org/obo/STATO_0000700">
        <rdfs:label xml:lang="en">p-value</rdfs:label>
    </Class>
    


    <!-- 
    ///////////////////////////////////////////////////////////////////////////////////////
    //
    // Individuals
    //
    ///////////////////////////////////////////////////////////////////////////////////////
     -->

    


    <!-- http://purl.obolibrary.org/obo/IAO_0000122 -->

    <Thing rdf:about="http://purl.obolibrary.org/obo/IAO_0000122">
        <rdf:type rdf:resource="http://purl.obolibrary.org/obo/IAO_0000078"/>
        <rdf:type rdf:resource="http://www.w3.org/2002/07/owl#NamedIndividual"/>
        <rdfs:label xml:lang="en">ready for release</rdfs:label>
    </Thing>
</rdf:RDF>



<!-- Generated by the OWL API (version 3.2.4.1806) http://owlapi.sourceforge.net -->



