coding_sequence_variant synonymous_variant silent_mutation sequence Jannovar:synonymous_variant SO:0001819 SO:0001588 synonymous_codon snpEff:SYNONYMOUS_CODING http://en.wikipedia.org/wiki/Silent_mutation VAAST:synonymous_variant http://snp.gs.washington.edu/SeattleSeqAnnotation137/HelpHowToUse.jsp ANNOVAR:synonymous SNV EBI term: Synonymous SNPs - In coding sequence, not resulting in an amino acid change (i.e. silent mutation). This term is sometimes used synonomously with the more general term 'silent mutation', although a silent mutation may occur in non coding sequence. The best practice is to annotate to the most specific term. VAAST:synonymous_codon http:www.ensembl.org/info/genome/variation/predicted_data.html#consequences Seattleseq:synonymous http://snpeff.sourceforge.net/SnpEff_manual.html coding-synon silent substitution http://vat.gersteinlab.org/formats.php Seattleseq:synonymous-near-splice VAT:synonymous 2011-06-24T03:38:30Z synonymous_coding synonymous codon http://en.wikipedia.org/wiki/Synonymous_mutation kareneilbeck A sequence variant where there is no resulting change to the encoded amino acid. silent mutation VEP:synonymous_variant